Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc10c04
         (820 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier prot...    37   6e-04
L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier prot...    37   6e-04
AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocas...    37   6e-04
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    25   2.8  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    25   2.8  
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    24   6.5  

>L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 37.1 bits (82), Expect = 6e-04
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = -1

Query: 820 VLRGTGGAFVLVLYDEIKKVL 758
           VLRGTGGA VLV YDE+K +L
Sbjct: 280 VLRGTGGALVLVFYDEVKALL 300


>L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 37.1 bits (82), Expect = 6e-04
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = -1

Query: 820 VLRGTGGAFVLVLYDEIKKVL 758
           VLRGTGGA VLV YDE+K +L
Sbjct: 280 VLRGTGGALVLVFYDEVKALL 300


>AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocase
           protein.
          Length = 301

 Score = 37.1 bits (82), Expect = 6e-04
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = -1

Query: 820 VLRGTGGAFVLVLYDEIKKVL 758
           VLRGTGGA VLV YDE+K +L
Sbjct: 280 VLRGTGGALVLVFYDEVKALL 300


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 8/58 (13%)
 Frame = +2

Query: 584 QLCNT**NNKLWNHCITL--------YLTKNKLLKSFSCLIIHDLRGVAATQNHIEIM 733
           Q+C     N +W+HC  +         LT N+++   S  +  + R V   +NH+E M
Sbjct: 181 QVCTPNATNTVWSHCQCVLADGVERGILTVNRMIPGPSIQVCENDRVVIDVENHMEGM 238


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 8/58 (13%)
 Frame = +2

Query: 584 QLCNT**NNKLWNHCITL--------YLTKNKLLKSFSCLIIHDLRGVAATQNHIEIM 733
           Q+C     N +W+HC  +         LT N+++   S  +  + R V   +NH+E M
Sbjct: 181 QVCTPNATNTVWSHCQCVLADGVERGILTVNRMIPGPSIQVCENDRVVIDVENHMEGM 238


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = -1

Query: 310 ELRISTFSYTAGVSLT*LCSVFLTSVHIMLLNVK 209
           ELR+ T +    + L  LCS+ +   H+ +++ K
Sbjct: 122 ELRLRTKAQVIAILLPILCSLSVAITHVTMVDFK 155


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 774,093
Number of Sequences: 2352
Number of extensions: 14666
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86902827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)