Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10c02
(785 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P69037 Cluster: FP protein; n=15; Nucleopolyhedrovirus|... 428 e-119
UniRef50_Q90179 Cluster: FP protein; n=20; Nucleopolyhedrovirus|... 221 2e-56
UniRef50_P91750 Cluster: 25K FP fusion protein; n=1; Lymantria d... 108 1e-22
UniRef50_Q91ET7 Cluster: ORF118 FP; n=10; Granulovirus|Rep: ORF1... 84 4e-15
UniRef50_P91749 Cluster: 25K FP frameshift protein; n=3; Lymantr... 77 5e-13
UniRef50_O96205 Cluster: Putative uncharacterized protein PFB056... 43 0.008
UniRef50_Q057S7 Cluster: Outer membrane protein; n=1; Buchnera a... 39 0.12
UniRef50_A1FKX5 Cluster: Phage portal protein, HK97; n=5; root|R... 39 0.16
UniRef50_Q7RM15 Cluster: Putative uncharacterized protein PY0237... 38 0.29
UniRef50_Q7RQ69 Cluster: Putative uncharacterized protein PY0123... 38 0.38
UniRef50_O97299 Cluster: Putative uncharacterized protein MAL3P7... 38 0.38
UniRef50_A5ZCG2 Cluster: Putative uncharacterized protein; n=2; ... 37 0.50
UniRef50_Q7RL15 Cluster: Kinesin motor domain, putative; n=2; Pl... 37 0.66
UniRef50_Q4YC49 Cluster: Putative uncharacterized protein; n=2; ... 37 0.66
UniRef50_Q8RGP4 Cluster: Trk system potassium uptake protein trk... 36 0.87
UniRef50_Q6JWV3 Cluster: D13-like protein; n=5; Plasmodium (Vinc... 36 0.87
UniRef50_A2FFI2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.87
UniRef50_Q1FMR0 Cluster: ATP-binding region, ATPase-like:Histidi... 36 1.2
UniRef50_Q8IKT9 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2
UniRef50_Q7RS64 Cluster: Plasmodium vivax PV1H14095_P-related; n... 36 1.2
UniRef50_Q54EQ0 Cluster: Putative uncharacterized protein; n=2; ... 36 1.2
UniRef50_Q240T8 Cluster: Cyclin, N-terminal domain containing pr... 36 1.2
UniRef50_Q46HV6 Cluster: ABC-type transport system involved in F... 36 1.5
UniRef50_Q31A47 Cluster: Type II secretory pathway ATPase PulE/T... 36 1.5
UniRef50_A2FGX8 Cluster: Putative uncharacterized protein; n=1; ... 36 1.5
UniRef50_Q7REV4 Cluster: Rhoptry protein; n=4; Plasmodium (Vinck... 35 2.0
UniRef50_O97230 Cluster: Putative uncharacterized protein MAL3P2... 35 2.0
UniRef50_UPI0000499C10 Cluster: vacuolar protein sorting 35; n=1... 35 2.7
UniRef50_Q5L1L0 Cluster: Hypothetical conserved protein; n=1; Ge... 35 2.7
UniRef50_Q8IIC0 Cluster: Putative uncharacterized protein; n=1; ... 35 2.7
UniRef50_Q8IHP9 Cluster: Putative uncharacterized protein; n=3; ... 35 2.7
UniRef50_Q6LFL8 Cluster: Putative uncharacterized protein; n=1; ... 35 2.7
UniRef50_Q233E2 Cluster: Putative uncharacterized protein; n=1; ... 35 2.7
UniRef50_A0EF18 Cluster: Chromosome undetermined scaffold_92, wh... 35 2.7
UniRef50_Q58815 Cluster: Glucosamine--fructose-6-phosphate amino... 35 2.7
UniRef50_Q9PPZ5 Cluster: Unique hypothetical membrane lipoprotei... 34 3.5
UniRef50_Q8IBG8 Cluster: Putative uncharacterized protein PF07_0... 34 3.5
UniRef50_Q7RRT3 Cluster: Putative uncharacterized protein PY0063... 34 3.5
UniRef50_Q4Z3Q7 Cluster: Putative uncharacterized protein; n=1; ... 34 3.5
UniRef50_Q4UAX8 Cluster: Putative uncharacterized protein; n=1; ... 34 3.5
UniRef50_A0DX60 Cluster: Chromosome undetermined scaffold_68, wh... 34 3.5
UniRef50_A0C8J9 Cluster: Chromosome undetermined scaffold_158, w... 34 3.5
UniRef50_P03879 Cluster: Intron-encoded RNA maturase bI4 precurs... 34 3.5
UniRef50_Q98S48 Cluster: Putative uncharacterized protein orf845... 34 4.6
UniRef50_O96199 Cluster: Putative uncharacterized protein PFB053... 34 4.6
UniRef50_UPI0000499060 Cluster: hypothetical protein 300.t00009;... 33 6.1
UniRef50_Q98RK1 Cluster: P60-LIKE (Mycoplasma hominis) LIPOPROTE... 33 6.1
UniRef50_A2DXK2 Cluster: Putative uncharacterized protein; n=1; ... 33 6.1
UniRef50_A7TKR6 Cluster: Putative uncharacterized protein; n=1; ... 33 6.1
UniRef50_Q4FV45 Cluster: Putative uncharacterized protein; n=1; ... 33 8.1
UniRef50_A6EKJ0 Cluster: Sensor protein; n=1; Pedobacter sp. BAL... 33 8.1
UniRef50_A5TXD5 Cluster: Possible ATP-binding protein; n=3; Fuso... 33 8.1
UniRef50_Q8IDE2 Cluster: Putative uncharacterized protein PF13_0... 33 8.1
UniRef50_Q7RID0 Cluster: RNB-like protein, putative; n=8; Plasmo... 33 8.1
UniRef50_A0BYG6 Cluster: Chromosome undetermined scaffold_137, w... 33 8.1
UniRef50_A6UNE4 Cluster: ATPase; n=1; Methanococcus vannielii SB... 33 8.1
UniRef50_Q9PQ33 Cluster: Phenylalanyl-tRNA synthetase beta chain... 33 8.1
>UniRef50_P69037 Cluster: FP protein; n=15;
Nucleopolyhedrovirus|Rep: FP protein - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 214
Score = 428 bits (1054), Expect = e-119
Identities = 206/214 (96%), Positives = 210/214 (98%)
Frame = -3
Query: 726 MDQFEQLINVSLLKSLIKTQIDENVSDNIKSMSEKLKRLECDNLTDSIEIYGIHDNRLNN 547
MDQFEQLINVSLLKSLIKTQIDENVSDNIKSMSEKLKRLE DNLTDS+EIYGIHD+RLNN
Sbjct: 1 MDQFEQLINVSLLKSLIKTQIDENVSDNIKSMSEKLKRLEYDNLTDSVEIYGIHDSRLNN 60
Query: 546 KKIRNYYLKKICILLNLNFKHVIESSFDKNHIVAKLCDATRAKEWQTMSRERRLKNFNLN 367
KKIRNYYLKKIC LL+LNFKHVIESSFDKNHIVAKLCDATRAKEWQT SRERRLKNFNLN
Sbjct: 61 KKIRNYYLKKICALLDLNFKHVIESSFDKNHIVAKLCDATRAKEWQTKSRERRLKNFNLN 120
Query: 366 INYDGPVKIFVAATAEQKLLLKKTRDALLPFYKYISICKNGVMVRRDEKSRVFIVKNEQN 187
INYDGPVKIFVAATAEQKLLLKKTRDALLPFYKYISICKNGVMVRRDEKSRVFIVKNEQN
Sbjct: 121 INYDGPVKIFVAATAEQKLLLKKTRDALLPFYKYISICKNGVMVRRDEKSRVFIVKNEQN 180
Query: 186 IEYLKANKYYAFHSDSVDNFEFENDSKKMLQNLI 85
IEYLKANKYYAFHSDSVDNFE ENDS+KMLQNLI
Sbjct: 181 IEYLKANKYYAFHSDSVDNFESENDSEKMLQNLI 214
>UniRef50_Q90179 Cluster: FP protein; n=20;
Nucleopolyhedrovirus|Rep: FP protein - Lymantria dispar
multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 217
Score = 221 bits (540), Expect = 2e-56
Identities = 109/206 (52%), Positives = 149/206 (72%), Gaps = 1/206 (0%)
Frame = -3
Query: 726 MDQFEQLINVSLLKSLIKTQIDENVSDNIKSMSEKLKRLECDNLTDSIEIYGIHDNR-LN 550
MD LINVS LK LIKT+ID NVS+++ ++++KL+RLE ++L S+EIYG+ D R
Sbjct: 1 MDMDFDLINVSGLKKLIKTEIDRNVSESLDALAQKLQRLEKNSLNCSVEIYGLADTRPFF 60
Query: 549 NKKIRNYYLKKICILLNLNFKHVIESSFDKNHIVAKLCDATRAKEWQTMSRERRLKNFNL 370
++K++NYY+KKIC LL LNFK V+ES N+I+ L DA A++WQT S + RLKN +L
Sbjct: 61 DRKVKNYYIKKICALLGLNFKAVLESETKNNYILVHLKDAATARDWQTRSCQVRLKNRDL 120
Query: 369 NINYDGPVKIFVAATAEQKLLLKKTRDALLPFYKYISICKNGVMVRRDEKSRVFIVKNEQ 190
+ YDGPVKIFVAA+ E+K LLKKTRDALLP +KY+S+CK GVM RR++ S ++I+K+E+
Sbjct: 121 GVEYDGPVKIFVAASRERKQLLKKTRDALLPHFKYVSLCKAGVMARRNDSSEIYIIKDER 180
Query: 189 NIEYLKANKYYAFHSDSVDNFEFEND 112
+I L + A SV FE D
Sbjct: 181 DIHKLVGQRAEASIDSSVVAISFEGD 206
>UniRef50_P91750 Cluster: 25K FP fusion protein; n=1; Lymantria
dispar MNPV|Rep: 25K FP fusion protein - Lymantria
dispar multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 127
Score = 108 bits (260), Expect = 1e-22
Identities = 54/104 (51%), Positives = 76/104 (73%), Gaps = 1/104 (0%)
Frame = -3
Query: 726 MDQFEQLINVSLLKSLIKTQIDENVSDNIKSMSEKLKRLECDNLTDSIEIYGIHDNR-LN 550
MD LINVS LK LIKT+ID NVS+++ ++++KL+RLE ++L S+EIYG+ D R
Sbjct: 1 MDMDFDLINVSGLKKLIKTEIDRNVSESLDALAQKLQRLEKNSLNCSVEIYGLADTRPFF 60
Query: 549 NKKIRNYYLKKICILLNLNFKHVIESSFDKNHIVAKLCDATRAK 418
++K++NYY+KKIC LL LNFK V+ES N+I+ L DA A+
Sbjct: 61 DRKVKNYYIKKICALLGLNFKAVLESETKNNYILVHLKDAATAR 104
>UniRef50_Q91ET7 Cluster: ORF118 FP; n=10; Granulovirus|Rep: ORF118
FP - Cydia pomonella granulosis virus (CpGV) (Cydia
pomonellagranulovirus)
Length = 161
Score = 83.8 bits (198), Expect = 4e-15
Identities = 49/134 (36%), Positives = 75/134 (55%), Gaps = 11/134 (8%)
Frame = -3
Query: 525 LKKICILLNLNFKHVIESSFDKNHIVAKLCDATRAKEWQTMSRERRLKNFNL-------- 370
L +C L+LN+ + + +N ++ KL D EW+ SRE+RL+ +L
Sbjct: 31 LMLLCTALSLNYDDIEHYTVKRNGLLVKLVDEKTVNEWERKSREKRLRLSDLKKLSDGIG 90
Query: 369 ---NINYDGPVKIFVAATAEQKLLLKKTRDALLPFYKYISICKNGVMVRRDEKSRVFIVK 199
N++ D VK+F AA + KLLL R L P +KYI I K GVM R +S++ ++K
Sbjct: 91 NVNNVDGDDKVKVFAAAPTKFKLLLHTVRKTL-PNFKYIWIGKRGVMARHRSRSQIHVIK 149
Query: 198 NEQNIEYLKANKYY 157
NE +I+Y+K+ YY
Sbjct: 150 NETDIDYIKS--YY 161
>UniRef50_P91749 Cluster: 25K FP frameshift protein; n=3; Lymantria
dispar MNPV|Rep: 25K FP frameshift protein - Lymantria
dispar multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 176
Score = 77.0 bits (181), Expect = 5e-13
Identities = 37/71 (52%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Frame = -3
Query: 726 MDQFEQLINVSLLKSLIKTQIDENVSDNIKSMSEKLKRLECDNLTDSIEIYGIHDNR-LN 550
MD LINVS LK LIKT+ID NVS+++ ++++KL+RLE ++L S+EIYG+ D R
Sbjct: 1 MDMDFDLINVSGLKKLIKTEIDRNVSESLDALAQKLQRLEKNSLNCSVEIYGLADTRPFF 60
Query: 549 NKKIRNYYLKK 517
++K++NYY+KK
Sbjct: 61 DRKVKNYYIKK 71
>UniRef50_O96205 Cluster: Putative uncharacterized protein PFB0560w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFB0560w - Plasmodium falciparum
(isolate 3D7)
Length = 3990
Score = 43.2 bits (97), Expect = 0.008
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 9/202 (4%)
Frame = -3
Query: 678 IKTQIDENVSDNIKSMSEKLKRLECDNLTDSIEIYGIHDNRLNNKKIRNYYLKKICILLN 499
IK I E SDNI + + K + + N+ EI+ I+ + LN + ++NYY IL +
Sbjct: 3163 IKYDIKEGGSDNIYTSNIKRNKKKIKNIE---EIFNIN-SMLNKEALKNYYTVDKTILYD 3218
Query: 498 LNFKHVIESSFDKNHIVAKLCDATRAKEWQTMSRERRLKNFNLNINYD-----GPVKIFV 334
+F +++ F+KN + KL + +K+ + +K +NY + +FV
Sbjct: 3219 ESFSKLLKGIFEKNKCLFKLKENYWSKQNSYYLHLKDIKKCRTCLNYQRLLFHEVINLFV 3278
Query: 333 AATAE--QKLLLKKTRDALLPFYKYISICKNGVMVRRDEKSRVFIVKNEQN--IEYLKAN 166
+ +LK D L+ + +I K R K ++ +++ N EYL +
Sbjct: 3279 FYVYKFCNWDVLKNYFDILINGSEE-AIIKVLEHFRNINKEQIDVIRKSYNNMYEYLSKS 3337
Query: 165 KYYAFHSDSVDNFEFENDSKKM 100
KY H D + N ++ N M
Sbjct: 3338 KYE--HIDDIIN-DYNNKINNM 3356
>UniRef50_Q057S7 Cluster: Outer membrane protein; n=1; Buchnera
aphidicola str. Cc (Cinara cedri)|Rep: Outer membrane
protein - Buchnera aphidicola subsp. Cinara cedri
Length = 571
Score = 39.1 bits (87), Expect = 0.12
Identities = 31/144 (21%), Positives = 66/144 (45%), Gaps = 3/144 (2%)
Frame = -3
Query: 582 EIYGIHDNRLNNKKIRN-YYLK-KICILLNLNFKHVIESSFDKNHIVAKLCDATRAKEWQ 409
+++ H N N K + N ++LK K + N+NF + KN+ + K + + ++
Sbjct: 130 KLFFFHKNH-NKKYLSNSFFLKNKFNNICNINFLNY------KNNYIQKKLNIFKNFNFK 182
Query: 408 TMSRERRLKNFNLNINYDGPVKIFVAATAEQKLLLKKTRDALLPFYK-YISICKNGVMVR 232
+ R +KNF+++ +YD +F+ +K + + K +I N +++
Sbjct: 183 NIFNRRNIKNFHISTSYDKDKGLFLQLLLLEKNIFNTNNELYFRILKNFIDTKINIYLIK 242
Query: 231 RDEKSRVFIVKNEQNIEYLKANKY 160
+ F +K++ I + K N Y
Sbjct: 243 SLTSFKDFFLKSDAFINHFKENNY 266
>UniRef50_A1FKX5 Cluster: Phage portal protein, HK97; n=5; root|Rep:
Phage portal protein, HK97 - Pseudomonas putida W619
Length = 444
Score = 38.7 bits (86), Expect = 0.16
Identities = 18/66 (27%), Positives = 35/66 (53%)
Frame = -3
Query: 285 LLPFYKYISICKNGVMVRRDEKSRVFIVKNEQNIEYLKANKYYAFHSDSVDNFEFENDSK 106
LLP+ K I +C N ++R DE+ R ++ N + + + + AF+S N + D
Sbjct: 330 LLPWIKRIEMCANRRLLRPDERRRFYVKFNPEGLLRMDSAARAAFYSSMTQNGIYTRDEC 389
Query: 105 KMLQNL 88
++ +N+
Sbjct: 390 RLKENM 395
>UniRef50_Q7RM15 Cluster: Putative uncharacterized protein PY02373;
n=9; cellular organisms|Rep: Putative uncharacterized
protein PY02373 - Plasmodium yoelii yoelii
Length = 2240
Score = 37.9 bits (84), Expect = 0.29
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Frame = -3
Query: 666 IDENVSDNIKSMSEKLKRLECDNLTDSIEIYGIHDNRLNNKKIRNYYLKK---ICILLNL 496
+ EN+ K + E ++ N+T+ I IY I N +NN + NY+ KK I +N
Sbjct: 1183 VSENLVHKEKHIVESIENDIVINITNLIHIYTICFNYINN-DLSNYHKKKNDAIKKKINK 1241
Query: 495 NFKHVIESSFDKNHIVAKLC 436
+ KHVIE F K IV + C
Sbjct: 1242 DIKHVIEYDFFK-FIVNEKC 1260
>UniRef50_Q7RQ69 Cluster: Putative uncharacterized protein PY01234;
n=13; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY01234 - Plasmodium yoelii yoelii
Length = 3623
Score = 37.5 bits (83), Expect = 0.38
Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Frame = -3
Query: 771 NIFYAPYTHRVDIINMDQFEQLINVSLLKSLIKTQIDENVSDNIKSMSEKLKRLECDNLT 592
NI Y Y H IN FE N+ + T I N+S +SM++ + CDN
Sbjct: 3407 NISYRYYEHENKKIN--NFENT-NIGN-NNHNNTFIHPNISK--QSMNKDIYSFLCDNNL 3460
Query: 591 DSIEIYGIHDNRLNNKKIRNYYLKKIC-------ILLNLNFKHVIESSFDK-NHIVAKLC 436
+ +D NNK++ NY KK+ I + LN + + +S FD N I K
Sbjct: 3461 QDCYLKKHYDELFNNKEVNNYVFKKVSKKEEHLGIFILLNSQWLSDSFFDNINQIETKYA 3520
Query: 435 D 433
D
Sbjct: 3521 D 3521
>UniRef50_O97299 Cluster: Putative uncharacterized protein MAL3P7.37;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein MAL3P7.37 - Plasmodium falciparum
(isolate 3D7)
Length = 1542
Score = 37.5 bits (83), Expect = 0.38
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Frame = -3
Query: 738 DIINMDQFEQLINVSLLKSLIKTQIDENVSDNIKSMSEKLKRLECDNLTDSIEIYGIHDN 559
+ IN + FE+ N K +D + +DNI + +K+ +I +Y I ++
Sbjct: 766 NFINFENFEEFENY--FKKGDSNIVDMHSNDNIHNNCSLIKK------KGNICMYDIFED 817
Query: 558 RLNNKKI-RNYYLKKICILLNLNFKHVI---ESSFDKNHIVAKLCD 433
+NN + Y++KIC+L N+N I + K +IV LC+
Sbjct: 818 NINNMFLMEEEYIEKICLLKNINLNKYIKYKKKKKKKEYIVYLLCE 863
>UniRef50_A5ZCG2 Cluster: Putative uncharacterized protein; n=2;
Bacteroides|Rep: Putative uncharacterized protein -
Bacteroides caccae ATCC 43185
Length = 404
Score = 37.1 bits (82), Expect = 0.50
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = -3
Query: 717 FEQLINVSLLKSLIKTQIDENVSDNIKSMSEKLKRLECDNLTDSIEIYGIHDNRLNNKKI 538
F Q+ NV KS I + N + + E +K E +L D+ ++ G R+N +++
Sbjct: 18 FAQMKNVKEAKS-IANDVKPNFKQAEQLIEEAMKNPETKDLADTWDVAGFIQKRINEEQM 76
Query: 537 RNYYLKK 517
+N +LKK
Sbjct: 77 KNAFLKK 83
>UniRef50_Q7RL15 Cluster: Kinesin motor domain, putative; n=2;
Plasmodium (Vinckeia)|Rep: Kinesin motor domain, putative
- Plasmodium yoelii yoelii
Length = 1196
Score = 36.7 bits (81), Expect = 0.66
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Frame = -3
Query: 735 IINMDQFEQLINVSLLKSLIKTQID-ENVSDNIKSMSEKLKRLECDNLTDSIEIYG---I 568
II + F+ L N L S+I+ +++ +N+ +NIK++ K+K + D I + I
Sbjct: 915 IIKENHFQNLTN--LPDSIIENKLEIQNLDENIKNIRNKIKNNQTITTIDDINMINTKYI 972
Query: 567 HDNRLNN-KKIRNYYLKKI---CILLNLNFKHVIESSFD 463
D +N I+NY LK++ L N++FK + E D
Sbjct: 973 DDQNADNYLVIKNYTLKELENEVNLKNIDFKSLFEKIND 1011
>UniRef50_Q4YC49 Cluster: Putative uncharacterized protein; n=2;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 852
Score = 36.7 bits (81), Expect = 0.66
Identities = 38/146 (26%), Positives = 74/146 (50%), Gaps = 5/146 (3%)
Frame = -3
Query: 780 GLKNIFYAPYTHRVDIINMDQFEQLINVSLLKSLIKTQIDENVS---DNIKSMSEKLKRL 610
G++NI Y ++D IN + + +I+ K + + EN + DNIK + +
Sbjct: 707 GIENIGNISYL-KIDKINKIE-KGMISNECFKENVIYKFGENTNEYLDNIKMIGIDEIII 764
Query: 609 ECDNL-TDSIEIYGIH-DNRLNNKKIRNYYLKKICILLNLNFKHVIESSFDKNHIVAKLC 436
+NL + I+ I+ ++ N+ RNYY +K ++ N+N ++ + F+ N + K+
Sbjct: 765 GKNNLGINKIKNNLIYREDDKENRNNRNYYFEKDKMINNINPENNGKEYFE-NDMYLKVE 823
Query: 435 DATRAKEWQTMSRERRLKNFNLNINY 358
K+++ ER++ N N N+NY
Sbjct: 824 QKDTLKKYRLKYEERKIINENNNMNY 849
>UniRef50_Q8RGP4 Cluster: Trk system potassium uptake protein trkA;
n=4; Fusobacterium nucleatum|Rep: Trk system potassium
uptake protein trkA - Fusobacterium nucleatum subsp.
nucleatum
Length = 452
Score = 36.3 bits (80), Expect = 0.87
Identities = 20/79 (25%), Positives = 45/79 (56%)
Frame = -3
Query: 741 VDIINMDQFEQLINVSLLKSLIKTQIDENVSDNIKSMSEKLKRLECDNLTDSIEIYGIHD 562
VDI+ + F+ +I + + ++ ++++ K++ E RLE +N ++IEI D
Sbjct: 333 VDILGENSFQSIITPKKIIADNIVRVVRSIANKKKNLIENFYRLE-NNTVEAIEILVNSD 391
Query: 561 NRLNNKKIRNYYLKKICIL 505
+++NN +++ +KK I+
Sbjct: 392 SKINNIPLKDLKIKKNLII 410
>UniRef50_Q6JWV3 Cluster: D13-like protein; n=5; Plasmodium
(Vinckeia)|Rep: D13-like protein - Plasmodium berghei
Length = 741
Score = 36.3 bits (80), Expect = 0.87
Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 9/126 (7%)
Frame = -3
Query: 783 RGLKNIFYAPYTH-----RVDIINMDQFEQLINVSLLKSLI---KTQIDENVSDNIKSMS 628
+G N +Y PY H RV F I++ + ++I K I ++N+ +
Sbjct: 111 KGSCNTYYCPYVHGLAETRVPGTYKLPFTNGIDIPSIPNIIIVDKIDISNLENNNLVHNN 170
Query: 627 EKLKRLECDNLTDS-IEIYGIHDNRLNNKKIRNYYLKKICILLNLNFKHVIESSFDKNHI 451
K + N DS + G + N N +YY KK+ F I+S FDKN +
Sbjct: 171 RYGKNIHSTNKVDSHFDTRGKNINGTNGYTNDSYYQKKLDCETTSAFS-TIDSIFDKNDV 229
Query: 450 VAKLCD 433
CD
Sbjct: 230 FKNTCD 235
>UniRef50_A2FFI2 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1389
Score = 36.3 bits (80), Expect = 0.87
Identities = 20/61 (32%), Positives = 35/61 (57%)
Frame = -3
Query: 627 EKLKRLECDNLTDSIEIYGIHDNRLNNKKIRNYYLKKICILLNLNFKHVIESSFDKNHIV 448
E++ +L + + IEI GI +N L NK++ N I+LN + KH S+ +K+ I+
Sbjct: 765 ERIDKLSDERIYHCIEITGIFNNELENKRLNN-------IMLNNSIKHYTSSTNEKDIII 817
Query: 447 A 445
+
Sbjct: 818 S 818
>UniRef50_Q1FMR0 Cluster: ATP-binding region, ATPase-like:Histidine
kinase, HAMP region:Histidine kinase internal region;
n=1; Clostridium phytofermentans ISDg|Rep: ATP-binding
region, ATPase-like:Histidine kinase, HAMP
region:Histidine kinase internal region - Clostridium
phytofermentans ISDg
Length = 498
Score = 35.9 bits (79), Expect = 1.2
Identities = 22/73 (30%), Positives = 41/73 (56%)
Frame = -3
Query: 375 NLNINYDGPVKIFVAATAEQKLLLKKTRDALLPFYKYISICKNGVMVRRDEKSRVFIVKN 196
N+N+N + ++ T+ K L KT DA+ +YK+ +N + +DEKS ++
Sbjct: 52 NINLN-ELEEELTNVQTSMTKFLNTKTTDAMEEYYKHEQSYRNAIKSLKDEKSSDKLILM 110
Query: 195 EQNIEYLKANKYY 157
E+NI+ K +++Y
Sbjct: 111 ERNIK--KMSEHY 121
>UniRef50_Q8IKT9 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 961
Score = 35.9 bits (79), Expect = 1.2
Identities = 45/201 (22%), Positives = 89/201 (44%), Gaps = 10/201 (4%)
Frame = -3
Query: 702 NVSLLKSL--IKTQIDENVSDNIKSMSEK----LKRLECDNL---TDSIEIYGIHDNRLN 550
NVS +K++ +K D +SD+ S EK + + CD+ +DSI + + N+L
Sbjct: 251 NVSEIKNMNELKVSYDSGISDSDDSDDEKETYCQENILCDDRPTDSDSITMLNVKSNKLK 310
Query: 549 NKKIRNYYLKKICILLNLNFKHVIESSFDKNHIVAKLCDATRAKEWQTMSRERRLKNFNL 370
+ I + KK+ +LN + E ++K++ A L DA + E ++ +
Sbjct: 311 DNLIVDEKFKKMDF--DLNKIEMEEQDYNKDN--ANLNDAYEDRRSHNDVEEGKISELLI 366
Query: 369 N-INYDGPVKIFVAATAEQKLLLKKTRDALLPFYKYISICKNGVMVRRDEKSRVFIVKNE 193
+ +N D I T +++ K T+ L + +C N ++ + + V K E
Sbjct: 367 DELNED----IIYEGTDDEE---KDTKQILNNMDNTLVVCTNDIINNNNNNNNVDNSKEE 419
Query: 192 QNIEYLKANKYYAFHSDSVDN 130
+N+ K ++ ++N
Sbjct: 420 ENVVLEKIEPSISYDVKFLEN 440
>UniRef50_Q7RS64 Cluster: Plasmodium vivax PV1H14095_P-related; n=3;
Plasmodium (Vinckeia)|Rep: Plasmodium vivax
PV1H14095_P-related - Plasmodium yoelii yoelii
Length = 1249
Score = 35.9 bits (79), Expect = 1.2
Identities = 65/246 (26%), Positives = 105/246 (42%), Gaps = 25/246 (10%)
Frame = -3
Query: 753 YTHRVDIINMDQFEQLINVSLLKSLI---KTQIDENVSDNIKS----MSEKLKRLECDNL 595
Y VD+ N + ++ + +S+I K I +D IKS M+EKLK +
Sbjct: 772 YIKNVDMSNECKNNLMLCIHTRESMIHFIKCYIYHIQNDVIKSEYISMNEKLKETF---I 828
Query: 594 TDSIEIYGIHDNRLNN---------KKIRNYYLKKICILLNLNFKHVIESSFDKNHIVAK 442
D I IY IH+N LNN + I N LK I I ++ +H+++ SF+KN +
Sbjct: 829 FDDI-IY-IHNNYLNNIFKYSFIINQNIINSILKIISIA-HIFTRHILKFSFNKNDPASD 885
Query: 441 LCDATRAKEWQTMSRERRL---KNFNLNINYD--GPVKIFVAATAEQKLLLKKTRDALLP 277
+ +R + Q S + L KNFN N D K F+ K + + +
Sbjct: 886 I-TRSRPERVQNNSINKDLSNQKNFNTNNKTDKNNYQKKFINELLRDKAYISMIHNTIKH 944
Query: 276 FYKYIS----ICKNGVMVRRDEKSRVFIVKNEQNIEYLKANKYYAFHSDSVDNFEFENDS 109
+ K+ + V D+ + F++K + N Y NKY + N+ + D+
Sbjct: 945 YDKHFKNFFFLLTEYVNNNIDDYAHNFLIKLDYNFYY--TNKYKQSFQTNSSNYN-QKDN 1001
Query: 108 KKMLQN 91
L N
Sbjct: 1002 PDWLPN 1007
>UniRef50_Q54EQ0 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 4135
Score = 35.9 bits (79), Expect = 1.2
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Frame = -3
Query: 678 IKTQIDENVSDNIKSMSEKLKRLECDNLTDSIEIYGIHDNRLNNK--KIRNYYLKKICIL 505
I +ID+ ++ +KSM+ + + C +++D I+ ++N NN I+N KK+ I
Sbjct: 3296 IYIEIDKYSNNKLKSMTNQSLIIHCKSISDEIKNLKSNNNNNNNDLLNIKNNQFKKLFIK 3355
Query: 504 LNLNFKHVIESSFDKNHIVAKLCDATRAKEWQTMSRERR 388
L + +I + F ++C + S+E+R
Sbjct: 3356 LLSGLRWLIYNEFGTYPYSTQVCCVIGLLLYNKNSKEQR 3394
>UniRef50_Q240T8 Cluster: Cyclin, N-terminal domain containing
protein; n=2; Eukaryota|Rep: Cyclin, N-terminal domain
containing protein - Tetrahymena thermophila SB210
Length = 2313
Score = 35.9 bits (79), Expect = 1.2
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = -3
Query: 564 DNRLNNKKIRNYYLKKICILLNLNFKHVIESSFDKNHIVAKLCDATRAKEWQTMSRERRL 385
DN + N K +NY + I NLN ++ S+ N + T + +Q+ +R
Sbjct: 563 DNIMKNNKFQNYSILADEIQQNLNLQNRRVSALLNNDNTQNYLNLTENQSYQSTNRSLNN 622
Query: 384 KNFNLNINYD 355
K+ ++N NYD
Sbjct: 623 KHTSINTNYD 632
>UniRef50_Q46HV6 Cluster: ABC-type transport system involved in Fe-S
cluster assembly permease component; n=2;
Prochlorococcus marinus|Rep: ABC-type transport system
involved in Fe-S cluster assembly permease component -
Prochlorococcus marinus (strain NATL2A)
Length = 412
Score = 35.5 bits (78), Expect = 1.5
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = -3
Query: 783 RGLKNIFYAPYTHRVDIINMDQFEQLINVSL---LKSLIKTQIDENVSDNIKSMSEKLKR 613
+G+K++F +R II ++N++L ++ L K +I+EN+ + IKS + K
Sbjct: 66 KGIKSVFPEKDKNRERIIINPNENPILNINLPNGIEELNKKEIEENLGEIIKSTNIKNDI 125
Query: 612 LECDNLTDSIEIYGIHDNRLNNKKI 538
C N S++I + R +N +
Sbjct: 126 SVCLNQASSLDILALKVKRNHNHSL 150
>UniRef50_Q31A47 Cluster: Type II secretory pathway ATPase PulE/Tfp
pilus assembly pathway ATPase PilB-like protein; n=2;
Prochlorococcus marinus|Rep: Type II secretory pathway
ATPase PulE/Tfp pilus assembly pathway ATPase PilB-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 594
Score = 35.5 bits (78), Expect = 1.5
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = -3
Query: 717 FEQLINVSLL-KSLIKTQIDENVSDNIKSMSEKLKRLECDNLTDSIEIYGIHDNRLNNKK 541
FE ++SL ++ +K I E+ SD I S+ + L+ DNL D I+ + I +N NN
Sbjct: 76 FENNSSISLTDENQLKNGI-EDTSDEINIQSKSTEDLKSDNLNDEIDNFDIVENEENNNS 134
Query: 540 I 538
I
Sbjct: 135 I 135
>UniRef50_A2FGX8 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 491
Score = 35.5 bits (78), Expect = 1.5
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Frame = -3
Query: 741 VDIINMDQFEQLINVSLLKSLIKTQIDENVSDN-IKSMSEKLKRLECDNLTDSIEIYGIH 565
+D N+D S L ++ V DN IKS++E + L I++Y +
Sbjct: 213 MDKYNLDYSYSNCAESYNLELFFFKLSNEVQDNKIKSLNESFTDMIFFGLKSLIKLYVEN 272
Query: 564 DNRLNNKKIRNYYLKKICILLNLN---FKHVIESSFDKNHI 451
+N+ I N+ +CI+LNL+ K++IE D + I
Sbjct: 273 GVDINSTNINNWTALVVCIILNLSPSVAKYLIEKKIDVDAI 313
>UniRef50_Q7REV4 Cluster: Rhoptry protein; n=4; Plasmodium
(Vinckeia)|Rep: Rhoptry protein - Plasmodium yoelii
yoelii
Length = 1559
Score = 35.1 bits (77), Expect = 2.0
Identities = 35/124 (28%), Positives = 52/124 (41%), Gaps = 1/124 (0%)
Frame = -3
Query: 717 FEQLINVSLLKSLIK-TQIDENVSDNIKSMSEKLKRLECDNLTDSIEIYGIHDNRLNNKK 541
+E + V LK+ K T+I ENV+ N S K+L+ D E Y +L KK
Sbjct: 17 YENIKIVKDLKAKSKATEIIENVNKNQHSNIGDKKKLDSTISYDDNEFYNNIYTKLKEKK 76
Query: 540 IRNYYLKKICILLNLNFKHVIESSFDKNHIVAKLCDATRAKEWQTMSRERRLKNFNLNIN 361
N + KK I+ + S D ++ + + E T ++ R L N NIN
Sbjct: 77 SENVHEKKSEIVHEKKNRQKSIISSDNESVINNFKEIVKNSE--TNNKNRYLINKQDNIN 134
Query: 360 YDGP 349
P
Sbjct: 135 SQNP 138
>UniRef50_O97230 Cluster: Putative uncharacterized protein MAL3P2.8;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein MAL3P2.8 - Plasmodium falciparum
(isolate 3D7)
Length = 1410
Score = 35.1 bits (77), Expect = 2.0
Identities = 45/178 (25%), Positives = 72/178 (40%), Gaps = 6/178 (3%)
Frame = -3
Query: 594 TDSIEIYGIHDNRLNNKKIRNYY---LKKICILLNL---NFKHVIESSFDKNHIVAKLCD 433
T+ Y H +NN I N L+ I +L+N NF ++ FD N + +
Sbjct: 162 TNYTSSYYKHKKSVNNIFINNDVFSSLQNIFLLINKINKNFFQRVQPKFDGNQKQIIIDN 221
Query: 432 ATRAKEWQTMSRERRLKNFNLNINYDGPVKIFVAATAEQKLLLKKTRDALLPFYKYISIC 253
+ + LKN N+NIN + I +A+ L L F+ +S+
Sbjct: 222 VVYINKHPYVLHIL-LKNNNVNINIYKEIDILLASEYFSHLCNNINN---LDFFSLVSLF 277
Query: 252 KNGVMVRRDEKSRVFIVKNEQNIEYLKANKYYAFHSDSVDNFEFENDSKKMLQNLI*F 79
+ + + +K IVKN +I Y N Y D +N + E + + NLI F
Sbjct: 278 H--IYIPKKKKKNYTIVKNANDI-YNSNNSYDGIIKDRQENIDEEEEKNQEHLNLIPF 332
>UniRef50_UPI0000499C10 Cluster: vacuolar protein sorting 35; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: vacuolar protein
sorting 35 - Entamoeba histolytica HM-1:IMSS
Length = 728
Score = 34.7 bits (76), Expect = 2.7
Identities = 22/88 (25%), Positives = 45/88 (51%)
Frame = -3
Query: 720 QFEQLINVSLLKSLIKTQIDENVSDNIKSMSEKLKRLECDNLTDSIEIYGIHDNRLNNKK 541
+F+ L +L++++ +QI N+ + +KS+ ++L +D +IY + DN L +
Sbjct: 264 KFQLLTLKPILRTIVTSQIGVNIVELLKSLIKQLINYIIIEKSDETDIYPLFDNSLKDAL 323
Query: 540 IRNYYLKKICILLNLNFKHVIESSFDKN 457
KK I L + ++E ++KN
Sbjct: 324 KHEENNKKEIIELLPLYIELLEHWYNKN 351
>UniRef50_Q5L1L0 Cluster: Hypothetical conserved protein; n=1;
Geobacillus kaustophilus|Rep: Hypothetical conserved
protein - Geobacillus kaustophilus
Length = 804
Score = 34.7 bits (76), Expect = 2.7
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = -3
Query: 720 QFEQLINVSLLKSLIKTQIDENVSDNIKSMSEKLKRLECDNLTDSIEIYGIHDNRLNNKK 541
+F++LIN K+ I+ Q N+ I + EKL+++E ++L E+ + N K
Sbjct: 440 RFKKLINYEEKKAAIENQ--RNLLQEINNEKEKLEKIEKESLLKKAELEASLKDEKNAVK 497
Query: 540 IRNYYLK 520
+ N YLK
Sbjct: 498 LVNNYLK 504
>UniRef50_Q8IIC0 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 525
Score = 34.7 bits (76), Expect = 2.7
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = -3
Query: 732 INMDQFEQLINVSLLKSLIKTQIDENVSDNIKSMSEKLKRLECDNLTDSI-EIYGIHDNR 556
I + +E+++N+ ++ QI++N S + + + EKLK + DN+ +IY H+N
Sbjct: 312 IKRNFYEKILNIETNFKNLENQIEDNHSFHFRCIIEKLKNRKYDNILYIYNDIYLYHNNL 371
Query: 555 LNNKKIRNYYLKKI 514
L K +Y K+
Sbjct: 372 LFLSKPSSYTWMKL 385
>UniRef50_Q8IHP9 Cluster: Putative uncharacterized protein; n=3;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 2940
Score = 34.7 bits (76), Expect = 2.7
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 11/119 (9%)
Frame = -3
Query: 678 IKTQIDENVSDNIKSMSEKLKRLECD-----NLTDS--IEIYGIHDNRLNNKKIRNYYLK 520
+K + D++ D++K EKLK + N+ +S +I N N KK RNY L
Sbjct: 65 MKNEEDKSDGDDMKIFDEKLKNFFLNYKINPNIEESNDTKISKKEKNNNNKKKKRNYPLN 124
Query: 519 KICILLNLNFKHVIESSF----DKNHIVAKLCDATRAKEWQTMSRERRLKNFNLNINYD 355
C N+N K + +S+ KN + D + + M+ ER N N IN D
Sbjct: 125 NECKQNNVNKKVMNKSNSCPLNKKNEKKQDIIDDKKKNKLHDMNNERDC-NINKEINND 182
>UniRef50_Q6LFL8 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1434
Score = 34.7 bits (76), Expect = 2.7
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Frame = -3
Query: 651 SDNIKSMSEKLKRLECDNL-TDSIEIYGIHDNRLNNKKIRNYYLKKICILLNLNFKHVIE 475
SDNI S + + DN+ +D++ I+ + +NN I NY+ + +L +++F
Sbjct: 971 SDNIYSDNMNSDNMNSDNIYSDNMNSDNINSDHINNYHINNYHTNEDDVLCSVSFLKSYF 1030
Query: 474 SSFDKNHIVAKLCDATRAKEWQTMSR--ERRLKNFNLNINYDGPVK 343
SS H + D T +K Q R ++ +NF +I + +K
Sbjct: 1031 SSIP--HFIDSWIDNTCSKINQVYIRISQKLFQNFYEHIFLENKMK 1074
>UniRef50_Q233E2 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1556
Score = 34.7 bits (76), Expect = 2.7
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Frame = -3
Query: 666 IDENVSDNIKSMSEKLKRLECDNLTDSIEIYGIHDNRLNNK-KIRNYY--LKKICILLNL 496
+DE V N++ + R+ DN+ + +++ I D NNK KIR + LK++ +N
Sbjct: 1025 LDETVKFNLEYVEG---RMYLDNMYNRVQVQAIIDQSSNNKSKIRKIFSKLKEVIFQINE 1081
Query: 495 NFKHV--IESSFDKNHIVAKLCDATRAKEWQTMSRERRL 385
NF+ E +KN +A+ A RA S + RL
Sbjct: 1082 NFQQQENFEEKTEKNFKIAE--KAIRAHTQYLNSLDARL 1118
>UniRef50_A0EF18 Cluster: Chromosome undetermined scaffold_92, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_92,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 929
Score = 34.7 bits (76), Expect = 2.7
Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 5/138 (3%)
Frame = -3
Query: 654 VSDNIKSMSEKLKR--LECDNLTDSIEIYGIHD---NRLNNKKIRNYYLKKICILLNLNF 490
++DNI S++ KL + L CD T YGI+D N NN + +Y I + N+N
Sbjct: 191 INDNIVSVASKLVQNLLNCDEFTFINPQYGIYDSTKNSFNNIESDDYLQDLISVTTNVNL 250
Query: 489 KHVIESSFDKNHIVAKLCDATRAKEWQTMSRERRLKNFNLNINYDGPVKIFVAATAEQKL 310
+S R ++ +R++++ LN+ D K KL
Sbjct: 251 LTENQSKLSLMFAQYSRTYTLRIQDECFFYHQRQVRDTLLNLTLD--YKCLNEVQILSKL 308
Query: 309 LLKKTRDALLPFYKYISI 256
+ K T +A + I I
Sbjct: 309 ISKATIEARVQLISPIQI 326
>UniRef50_Q58815 Cluster: Glucosamine--fructose-6-phosphate
aminotransferase [isomerizing] (EC 2.6.1.16)
(Hexosephosphate aminotransferase) (D-fructose-6-
phosphate amidotransferase) (GFAT)
(L-glutamine-D-fructose-6-phosphate amidotransferase)
(Glucosamine-6-phosphate synthase) [Contains: Mja gf6p
intein]; n=7; Methanococcales|Rep:
Glucosamine--fructose-6-phosphate aminotransferase
[isomerizing] (EC 2.6.1.16) (Hexosephosphate
aminotransferase) (D-fructose-6- phosphate
amidotransferase) (GFAT)
(L-glutamine-D-fructose-6-phosphate amidotransferase)
(Glucosamine-6-phosphate synthase) [Contains: Mja gf6p
intein] - Methanococcus jannaschii
Length = 1099
Score = 34.7 bits (76), Expect = 2.7
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = -3
Query: 669 QIDENVSDNIKSMSEKL--KRLECDNLTDSIEIYGIHDNRLNNKKIRNYYLKKICILLNL 496
++DE + + ++ + EKL R + + L EIY + + I LKK+C L +
Sbjct: 189 KLDETIRNKLRKVREKLGLTRKDVEKLCGVKEIYIVKIETGKLESIEEERLKKLCSLYGI 248
Query: 495 NFKHVI 478
NF+ +I
Sbjct: 249 NFEEII 254
>UniRef50_Q9PPZ5 Cluster: Unique hypothetical membrane lipoprotein;
n=1; Ureaplasma parvum|Rep: Unique hypothetical membrane
lipoprotein - Ureaplasma parvum (Ureaplasma urealyticum
biotype 1)
Length = 5005
Score = 34.3 bits (75), Expect = 3.5
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
Frame = -3
Query: 759 APYTHRVDIINMDQFEQLINVSLLKSLIKTQIDENVSDNIKSMSEKLKRL--ECDNLTDS 586
A +T+R+ +++ Q QL NV++ + + N+ DN K++ K + E NL D+
Sbjct: 1387 ADHTYRLTSVSLKQKPQLANVNINNNNNNEILLNNIEDNQKTIHTLSKSIVNEISNLADA 1446
Query: 585 I--EIYGIHDNRL------NNKKIRNYYLKKI 514
GI+D + NN K+ N Y+K +
Sbjct: 1447 YPKNNNGIYDVKFNINIIKNNNKLNNKYVKVV 1478
>UniRef50_Q8IBG8 Cluster: Putative uncharacterized protein PF07_0120;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PF07_0120 - Plasmodium falciparum
(isolate 3D7)
Length = 2569
Score = 34.3 bits (75), Expect = 3.5
Identities = 44/203 (21%), Positives = 84/203 (41%), Gaps = 7/203 (3%)
Frame = -3
Query: 690 LKSLIKTQIDENVSDNIKSMS-EKLKRLECDNLTDSIEIYGIHD---NRLNNKKIRNYYL 523
+KS + D +S + M+ +K+ R + + EIY +H+ N +NN +N L
Sbjct: 500 MKSSKEYLSDSELSKDDYDMTIDKMNRRKKSESISNHEIYSVHEEKKNYMNNTNDKNINL 559
Query: 522 KKICILLNLNFKHVIESSFDKNHIVAKLCDAT--RAKEWQTMSRERRLKNFNLNINYDGP 349
+N +S + N V ++ + T K ++ + R + N+ +Y
Sbjct: 560 NNSESYEEINDNFSKPTSSNDNSSVGRITNDTLSSGKNYKNLPRNSEICKKNVTNDYIN- 618
Query: 348 VKIFVAATAEQKLLLKKTRDALLPFYKYI-SICKNGVMVRRDEKSRVFIVKNEQNIEYLK 172
F+ +E LL +D + FY K ++ ++ + F N+ N
Sbjct: 619 ---FINNVSEN--LLISEQDDVEDFYSSSDENYKKRSNIQHNKNNEKF---NKSNDSQFY 670
Query: 171 ANKYYAFHSDSVDNFEFENDSKK 103
NK YA ++ DN +++ KK
Sbjct: 671 RNKMYALNNQLNDNIYLDDEKKK 693
>UniRef50_Q7RRT3 Cluster: Putative uncharacterized protein PY00634;
n=12; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY00634 - Plasmodium yoelii yoelii
Length = 5309
Score = 34.3 bits (75), Expect = 3.5
Identities = 46/218 (21%), Positives = 96/218 (44%), Gaps = 9/218 (4%)
Frame = -3
Query: 711 QLINVSLLKSLIKTQIDENVSD-NIKSMSEKLKRLECDNLTDSIEIYGIHDNR-----LN 550
Q ++++ + + + + EN + N K +++ + L N D I + +++ L
Sbjct: 4273 QSLDINYIYNCVYKYVSENNNKINPKKLNDVVNLL-FSNHEDLINLIKKYEDEEFLYALG 4331
Query: 549 NKKIRNYYLKKICILLNLNFKHVIESSFDKNHIVAKLCDATRAKEWQTMSRERRLKNFNL 370
+ I +Y+L IC + K + + KN+I KL +T KE M+ ++ + N +
Sbjct: 4332 SLYISHYFLNIICSQIRKEIKEIFKKVGLKNYI-KKLTLST--KEQIYMNTQQNIYNEKI 4388
Query: 369 NINYDGPVKIFVAATAEQKLLLKKTRDALLPFYKYISICKNGVMVRRDEKSRVFI-VKNE 193
N + + F ++ + LKK + + + V ++ +K I
Sbjct: 4389 NPSDELTYNDFF--NIKKNIFLKKEINNISKNIPLLPKLLTNVNKKKKKKIYTMINTSMN 4446
Query: 192 QNIEYLKANKYYAFHSDSVDN--FEFENDSKKMLQNLI 85
+ YL A Y +S++V N + +ND K L+N++
Sbjct: 4447 KKCNYLIAQYIYINNSENVQNLYIKLKNDFNKFLKNIL 4484
>UniRef50_Q4Z3Q7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 1405
Score = 34.3 bits (75), Expect = 3.5
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Frame = -3
Query: 672 TQIDENVSDNIKSMSEKLKRLECDNLTDSIEIYGIHDNRLNNKKIRNYYLKKIC------ 511
T I N+S +SM++ + C+N + +D NNK++ NY KK+
Sbjct: 1218 TFIHPNISK--QSMNKDIYSFLCENNLQDCYLKKHYDELFNNKEVNNYVFKKVSKKEEHL 1275
Query: 510 -ILLNLNFKHVIESSFDK-NHIVAKLCD 433
I + LN + + +S FD N I K D
Sbjct: 1276 GIFILLNSQWLSDSFFDNINQIETKYAD 1303
>UniRef50_Q4UAX8 Cluster: Putative uncharacterized protein; n=1;
Theileria annulata|Rep: Putative uncharacterized protein
- Theileria annulata
Length = 941
Score = 34.3 bits (75), Expect = 3.5
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Frame = -3
Query: 765 FYAPYTHRVDIINMDQFEQLINVSLLKSLIKTQID--ENVS---DNIKSMSEKLKRL--E 607
FY + H + + ++ + +N+ +++ + + ENV DN+K + EKLKRL E
Sbjct: 798 FYTNHNHEIILKGSEKMD--VNIEMIERIFNKNYNQSENVELIMDNLKYIDEKLKRLIKE 855
Query: 606 CDNLTDSIEIY-GIHDNRLNNKKIRNYYLKKICILLNLN 493
+N+ +I +Y + LN+K YL+++ L LN
Sbjct: 856 NENMHKAIYMYINSSERDLNSKN----YLEELVNLETLN 890
>UniRef50_A0DX60 Cluster: Chromosome undetermined scaffold_68, whole
genome shotgun sequence; n=5; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_68, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 2716
Score = 34.3 bits (75), Expect = 3.5
Identities = 30/139 (21%), Positives = 52/139 (37%), Gaps = 1/139 (0%)
Frame = -3
Query: 678 IKTQIDENVSDNIKSMSEKLKRLE-CDNLTDSIEIYGIHDNRLNNKKIRNYYLKKICILL 502
IK QI+E + +M EK+ + CDNL + + + +I NY + C
Sbjct: 2539 IKQQIEEGNQHKVLTMEEKIYKTHICDNLPNGTTNEALPAQYVKGTQIHNYSVDPNCQAA 2598
Query: 501 NLNFKHVIESSFDKNHIVAKLCDATRAKEWQTMSRERRLKNFNLNINYDGPVKIFVAATA 322
N + D IV A K+ Q + R + L I + ++ +
Sbjct: 2599 NFIQSKAWSTDSDDKAIVTNPRIADSVKQIQLQNHTNRNLHVILEIKGEPNPCHYIPKSK 2658
Query: 321 EQKLLLKKTRDALLPFYKY 265
Q L+ K+ + K+
Sbjct: 2659 IQSLMSSKSSTTMFTAIKH 2677
>UniRef50_A0C8J9 Cluster: Chromosome undetermined scaffold_158,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_158,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 322
Score = 34.3 bits (75), Expect = 3.5
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = -3
Query: 465 DKNHIVAKLCDATRAKEWQTMSRERRLKNFNLNINYDGPV---KIFVAATAEQKLLLKKT 295
DK++I+ +LCD + +K +Q SR ++ F +N + KI +LLKK
Sbjct: 105 DKHYIIMELCDESLSKRYQEFSRNEAIQYFQQILNGLEELQKHKIIHRDLKLDNILLKKR 164
Query: 294 RDALLPFYKYISICKNGV 241
+ ++ F SI NG+
Sbjct: 165 QIKIIDFGFAKSISDNGL 182
>UniRef50_P03879 Cluster: Intron-encoded RNA maturase bI4 precursor
(RNA maturase SCbI4) [Contains: Truncated, nonfunctional
cytochrome b; RNA maturase bI4 (EC 3.1.-.-)]; n=18;
Fungi/Metazoa group|Rep: Intron-encoded RNA maturase bI4
precursor (RNA maturase SCbI4) [Contains: Truncated,
nonfunctional cytochrome b; RNA maturase bI4 (EC
3.1.-.-)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 638
Score = 34.3 bits (75), Expect = 3.5
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = -3
Query: 705 INVSLLKSLIKTQIDENVSDNIKSMSE-KLKRLECDNLTDSIEIYGIHDNRLNNKKIRNY 529
I V L + QI + ++K S K R N I++ + + N K R
Sbjct: 430 ITVELKDEKMLRQIQDKFGGSVKLRSGVKAIRYRLQNKEGMIKLINAVNGNIRNSK-RLV 488
Query: 528 YLKKICILLNLNFKHVIESSFD 463
K+CILLN++FK I+ + D
Sbjct: 489 QFNKVCILLNIDFKEPIKLTKD 510
>UniRef50_Q98S48 Cluster: Putative uncharacterized protein orf845;
n=1; Guillardia theta|Rep: Putative uncharacterized
protein orf845 - Guillardia theta (Cryptomonas phi)
Length = 845
Score = 33.9 bits (74), Expect = 4.6
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Frame = -3
Query: 732 INMDQFEQLINVSLLKS----LIKTQIDENVSDNIKSMSEKLKRLECDNLTDSIEIYG-- 571
+N+ F N+SLLK K I++ + +K + + K ++ D + D I +Y
Sbjct: 184 LNLFSFRNECNLSLLKFNENYFTKKFINKKILTKVKIQNNRYKIIDTDEVVDII-LYNRS 242
Query: 570 ------IHDNRLNNKKIRNYYLKKICILLNLNFKHVIESSFDKNHI 451
I+ N +NN ++ NY+ +K + L KH+ + N++
Sbjct: 243 GNLINIINKNEINNSRVSNYFSRKYYQQVVLLNKHLNNKFNEVNYL 288
>UniRef50_O96199 Cluster: Putative uncharacterized protein PFB0530c;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFB0530c - Plasmodium falciparum
(isolate 3D7)
Length = 430
Score = 33.9 bits (74), Expect = 4.6
Identities = 22/100 (22%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = -3
Query: 387 LKNFNLNINYDGPVKIFVAATAEQKLLLKKTRDALLPFYKYIS--ICKNGVMVRRDEKSR 214
+KN Y +K+++ E +++ + K + + N + ++ S
Sbjct: 93 VKNMKEKNYYYNEIKLYLKYLPESNIMITTNNYEDINKMKCLKYEVLNNNIYYQKHNFSL 152
Query: 213 VFIVKNEQNIEYLKANKYYAFHSDSVDNFEFENDSKKMLQ 94
+ + N N +Y+K YY+ H+ V + E+ N KK+LQ
Sbjct: 153 LKLYINACNSQYIKPLLYYSLHTCIVGDNEYINVHKKILQ 192
>UniRef50_UPI0000499060 Cluster: hypothetical protein 300.t00009;
n=2; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 300.t00009 - Entamoeba histolytica HM-1:IMSS
Length = 533
Score = 33.5 bits (73), Expect = 6.1
Identities = 32/166 (19%), Positives = 72/166 (43%)
Frame = -3
Query: 660 ENVSDNIKSMSEKLKRLECDNLTDSIEIYGIHDNRLNNKKIRNYYLKKICILLNLNFKHV 481
E + ++ M ++ E + + I+ + D + KK++ + L N K V
Sbjct: 227 EQKINRLEEMITSYEKAEGSDERNEIKEQQMQDEIIELKKVQEKLQNEKIELQNQLEKLV 286
Query: 480 IESSFDKNHIVAKLCDATRAKEWQTMSRERRLKNFNLNINYDGPVKIFVAATAEQKLLLK 301
I+ + ++ K + + + + ++K + + +K + ++ L+K
Sbjct: 287 IDKNEEQER-KRKEVEELKKRNEELEKENTKVKESIGSNDLVNSLKQELEKKEKENQLIK 345
Query: 300 KTRDALLPFYKYISICKNGVMVRRDEKSRVFIVKNEQNIEYLKANK 163
+ + L +Y +I+ V+ DEK +VFI +N++N E L K
Sbjct: 346 DSNEKLQQYYAFINKEAQRVIQESDEKVKVFIKENDKNGEELLEQK 391
>UniRef50_Q98RK1 Cluster: P60-LIKE (Mycoplasma hominis) LIPOPROTEIN;
n=1; Mycoplasma pulmonis|Rep: P60-LIKE (Mycoplasma
hominis) LIPOPROTEIN - Mycoplasma pulmonis
Length = 476
Score = 33.5 bits (73), Expect = 6.1
Identities = 22/81 (27%), Positives = 41/81 (50%)
Frame = -3
Query: 711 QLINVSLLKSLIKTQIDENVSDNIKSMSEKLKRLECDNLTDSIEIYGIHDNRLNNKKIRN 532
++I + ++K+ + +E V + K+K L+ +N TD +IY D NN +
Sbjct: 162 EIIKMLMVKNYLLNTSEEQVKKSFPDYENKIKLLDKNN-TDK-KIYESIDLSKNNFFLMK 219
Query: 531 YYLKKICILLNLNFKHVIESS 469
Y LK +++ N+K +SS
Sbjct: 220 YLLKDKRMIMKWNYKSETDSS 240
>UniRef50_A2DXK2 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1023
Score = 33.5 bits (73), Expect = 6.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -3
Query: 621 LKRLECDNLTDSIEIYGIHDNRLNNKKIRNYYLKKI 514
LK DNL ++ YG+ D ++N K + YY++KI
Sbjct: 520 LKEYNYDNLQQFLKQYGVPDTKINGKYLIFYYVEKI 555
>UniRef50_A7TKR6 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 792
Score = 33.5 bits (73), Expect = 6.1
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -3
Query: 723 DQFEQLINVSLLKSLIKTQIDENVSDNIKSMSEKLKRLECDNLTDS 586
D+ E+ INVS L+ KTQ D N+ S++E K+ + DS
Sbjct: 335 DRLEKSINVSTLREASKTQEDRRTRQNVYSLAELQKQYKKKKTMDS 380
>UniRef50_Q4FV45 Cluster: Putative uncharacterized protein; n=1;
Psychrobacter arcticus|Rep: Putative uncharacterized
protein - Psychrobacter arcticum
Length = 586
Score = 33.1 bits (72), Expect = 8.1
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +1
Query: 106 FAIVFKLKIINAIAMKSVIFVGFEIFNILLIFNNKHATFFVASHHNTVFTNGNVFVKRQQ 285
F + K+K+I A A +++ +G+ + + LL++NN A A NT + + QQ
Sbjct: 234 FKLPVKIKVITASACTTLLLLGYGVGSYLLLYNNSAAVSGAARISNTALDSRWIL---QQ 290
Query: 286 SVTSFFK 306
FF+
Sbjct: 291 QAWLFFQ 297
>UniRef50_A6EKJ0 Cluster: Sensor protein; n=1; Pedobacter sp.
BAL39|Rep: Sensor protein - Pedobacter sp. BAL39
Length = 707
Score = 33.1 bits (72), Expect = 8.1
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = +1
Query: 127 KIINAIAMKSVIFVGFEIFNILLIFNNKHATFFVASHHNTVFTNGNVFVKRQQSVTS 297
+I N+ AM SV F F++FN L N+KH+ H +T V +K QSV S
Sbjct: 21 QIQNSAAMPSVSFTNFQLFNKDLDINDKHSPL----QHTINYTK-EVVLKSDQSVLS 72
>UniRef50_A5TXD5 Cluster: Possible ATP-binding protein; n=3;
Fusobacterium nucleatum|Rep: Possible ATP-binding
protein - Fusobacterium nucleatum subsp. polymorphum
ATCC 10953
Length = 921
Score = 33.1 bits (72), Expect = 8.1
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Frame = -3
Query: 384 KNFNL-NINYDGPVKIFVAATAEQKLLLKKTRDALLPFYKYISICKNGVM-VRRDEKSRV 211
KN N+ + N + +K + E L+K +D KY++I K ++ ++ +KS++
Sbjct: 223 KNINVVSKNLENEIKDYETTEVELNNLVKNIKDEENKIKKYLNILKENIIEAKQAKKSKI 282
Query: 210 FIVKNEQN-IEYLKANKYYAFHSDSVDNFEFENDSKKMLQNLI 85
I + E++ +E L+ +++DN E QN I
Sbjct: 283 IIKETEKSYLECLEIENRLKNLRENLDNLLDEQKLNIQYQNNI 325
>UniRef50_Q8IDE2 Cluster: Putative uncharacterized protein
PF13_0298; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PF13_0298 - Plasmodium
falciparum (isolate 3D7)
Length = 1398
Score = 33.1 bits (72), Expect = 8.1
Identities = 24/104 (23%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Frame = -3
Query: 723 DQFEQLINVSLLKS--LIKTQIDENVSDNIKSMSEKLKRLECDNLTDSIEIYGIHDNRLN 550
++F+ L+ +K+ L+ ++ N D I+++ K +R N ++ ++Y I+ N +
Sbjct: 228 NEFDNLLTTKCVKNQILMNNKMSLNNKD-IRNVFPKYERTNSLNYYNNYDVYKINKNPNS 286
Query: 549 NKKIRNYYLKKICILLNLNFKHVIESSFDKNHIVAKLCDATRAK 418
K N Y+K+ I N ++ E ++D+N +V + + + K
Sbjct: 287 VVKNENIYMKRYNIPQMYNDDNIYE-TYDENILVKDVQETKQKK 329
>UniRef50_Q7RID0 Cluster: RNB-like protein, putative; n=8; Plasmodium
(Vinckeia)|Rep: RNB-like protein, putative - Plasmodium
yoelii yoelii
Length = 2804
Score = 33.1 bits (72), Expect = 8.1
Identities = 44/207 (21%), Positives = 86/207 (41%), Gaps = 7/207 (3%)
Frame = -3
Query: 675 KTQIDENVSDNIKSMSEKLKRLECDNLTDSIEIYGIHDNRLNNKKIRNYYLKKICILLNL 496
KT I +V+++ E++K N S+EI I DN+ + + LKK +
Sbjct: 441 KTDICSSVTNSSFDEKEEMK-----NNYSSLEILKIIDNKFKKRDLEISVLKKSIESIGS 495
Query: 495 NFKHVIESSFDKNHIVAKLCDATRAKE-----WQTMSRERRLKNFNLNINYDGPVKIFVA 331
N K +++ + + N + L + K+ + +S E K + ++ P++ V+
Sbjct: 496 NIKLLLQFNNNSNINIDMLKYGNKNKDNINKNVEGISNEIMYKTEDSHVWSQNPIE-EVS 554
Query: 330 ATAEQKLLLKKTRDALLPFYKYISICKNGVMVRRDEKSRVFIVKNEQNIEYLKANKYYAF 151
L +KT+ K + N +M+ ++ + ++ NI K NK +
Sbjct: 555 INQNNIKLEEKTKSVKNNTSKNVKDVNNNIMINDKKEMNKYNSSSQDNILIGKENKDTSL 614
Query: 150 HSDS--VDNFEFENDSKKMLQNLI*FK 76
+ + NF +N + K L FK
Sbjct: 615 KIEKLLISNFTEKNSNVKGKSELEKFK 641
>UniRef50_A0BYG6 Cluster: Chromosome undetermined scaffold_137,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_137,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 647
Score = 33.1 bits (72), Expect = 8.1
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -3
Query: 219 SRVFIVKNEQNIEYLKANKYYAFHSDSVDNFEFEND 112
S+ F+++NE+N +YL+ + S +D F F N+
Sbjct: 38 SQTFMIQNEENWDYLRQQYAQLYDSQELDKFHFPNE 73
>UniRef50_A6UNE4 Cluster: ATPase; n=1; Methanococcus vannielii
SB|Rep: ATPase - Methanococcus vannielii SB
Length = 423
Score = 33.1 bits (72), Expect = 8.1
Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 7/120 (5%)
Frame = -3
Query: 702 NVSLLKSLI---KTQIDENVSDNIKSMSEKLKRLE----CDNLTDSIEIYGIHDNRLNNK 544
N+ LK LI + D N++D +K+++ K+ E L +S +IY IH NRLN
Sbjct: 105 NIDDLKKLIGYFENSKDTNLADVLKNINLSEKKEEFPEWLKELLNSCKIYFIHTNRLN-- 162
Query: 543 KIRNYYLKKICILLNLNFKHVIESSFDKNHIVAKLCDATRAKEWQTMSRERRLKNFNLNI 364
KI Y K L+L V+E S D +V K+ R K++ +S E+ KNF +N+
Sbjct: 163 KISEYEKTK---SLDLT---VLEYSKD---LVKKI--EERLKKYGNLS-EQLNKNFPINV 210
>UniRef50_Q9PQ33 Cluster: Phenylalanyl-tRNA synthetase beta chain;
n=1; Ureaplasma parvum|Rep: Phenylalanyl-tRNA synthetase
beta chain - Ureaplasma parvum (Ureaplasma urealyticum
biotype 1)
Length = 772
Score = 33.1 bits (72), Expect = 8.1
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Frame = -3
Query: 729 NMDQFEQLINV-SLLKSLIKTQIDENVSDNIKSMSEKLKRLECDNLT--DSIEIYGIHDN 559
NM +L N+ SLL+ L Q +N +NI +S K+ ++ T I + ++
Sbjct: 533 NMRSHLKLNNLNSLLEVLEYNQNQKNELENIFEIS-KINPVDSSQQTVLSIILCKPLINS 591
Query: 558 RLNNKKIRNYYLKKICILLNLNFKHVIESSFDKNHIVAKLCD 433
++N+ I N ++ +L L K I+ ++DKNH+V +L D
Sbjct: 592 KINDSLIVNNFVTTKALLHALLTKLNIDYAYDKNHVVNELYD 633
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 598,156,166
Number of Sequences: 1657284
Number of extensions: 10528308
Number of successful extensions: 37648
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 35307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37601
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66673674990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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