Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc10c01
         (211 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    22   2.3  
AY146741-1|AAO12101.1|  131|Anopheles gambiae odorant-binding pr...    20   9.1  

>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 203 RLGFPDIAFFHLLTHA 156
           R G+ DI   HLL+HA
Sbjct: 126 RFGYRDILDTHLLSHA 141


>AY146741-1|AAO12101.1|  131|Anopheles gambiae odorant-binding
           protein AgamOBP10 protein.
          Length = 131

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 1   KGIPHKDKFEIFKHK 45
           KG+  KDK E+F  K
Sbjct: 77  KGVVLKDKLEVFLTK 91


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,026
Number of Sequences: 2352
Number of extensions: 1065
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 563,979
effective HSP length: 47
effective length of database: 453,435
effective search space used:  9975570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)