Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10b23
(542 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954256-9|CAJ14150.1| 872|Anopheles gambiae putative calcium/c... 50 7e-08
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 35 0.002
AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein. 28 0.23
AY330172-1|AAQ16278.1| 170|Anopheles gambiae odorant-binding pr... 27 0.40
AJ618922-1|CAF02001.1| 272|Anopheles gambiae odorant-binding pr... 27 0.40
DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein. 24 3.7
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein. 23 4.9
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 23 8.6
>CR954256-9|CAJ14150.1| 872|Anopheles gambiae putative
calcium/calmodulin-dependentprotein kinase, CAKI
protein.
Length = 872
Score = 49.6 bits (113), Expect = 7e-08
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Frame = -1
Query: 488 SHQLVSNIIRQLCEALNDLHKHNFIHNDIKLENVLYFEALDRVYVCDYGLCKHENLPSVH 309
S + + +RQ+ EAL H+++ IH D++ L A + V G LP+
Sbjct: 93 SEAVACHYLRQILEALRYCHENDIIHRDVRPACALLATADNSAPVKLGGFGSAVQLPNGR 152
Query: 308 D--------GTLEYFSPEKIRRHNYARSFDWYAVGVLTYKLLTGGRHPFEKSEDEMLDLN 153
D G Y +PE + R Y + D + GV+ + LL+ GR PF S + D
Sbjct: 153 DSVETHGRVGCPHYMAPEVVARRVYGKPCDVWGAGVMLHVLLS-GRLPFHGSGKRLQD-- 209
Query: 152 SMKRRQQYNDIGVLKHVRNVNARDFV 75
++ R + D KH+ + NA+D V
Sbjct: 210 AIARGRVTLDTPEWKHISS-NAKDLV 234
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 35.1 bits (77), Expect = 0.002
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Frame = -1
Query: 500 KGELSHQLVSNIIRQLCEALNDLHKHNFIHNDIKLENVLYFEALDRVYVCDYGLCKHENL 321
K ++ + + N Q+ + L + +H D+ NVL + V + +GL K +
Sbjct: 928 KDKIGSKALLNWSTQIARGMAYLEERRLVHRDLAARNVLV-QTPSCVKITVFGLAKLLDF 986
Query: 320 PS----VHDGTL--EYFSPEKIRRHNYARSFDWYAVGVLTYKLLTGGRHPFE 183
S G + ++ + E IR + D +A G+ ++LLT G P+E
Sbjct: 987 DSDEYRAAGGKMPIKWLALECIRHRVFTSKSDVWAFGITIWELLTYGARPYE 1038
>AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein.
Length = 565
Score = 27.9 bits (59), Expect = 0.23
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 14/108 (12%)
Frame = -1
Query: 491 LSHQLVSNIIRQLCEALNDLHKHNFIHNDIKLENVLYFEALDRVYVCDYGLC-----KHE 327
L+H L S + E K + H DIK +N+L + + + D+GL + +
Sbjct: 359 LAHSLASGVAHLHTEIFGTPGKPSIAHRDIKSKNIL-VKRNGQCAIADFGLAVKYTSESD 417
Query: 326 NLPSVHD---GTLEYFSPEKIRRH---NYARSF---DWYAVGVLTYKL 210
+ ++ GT Y +PE + N F D Y+VG++ +++
Sbjct: 418 TIQIANNSRVGTRRYMAPEVLSETLDLNLFEGFKMADMYSVGLVFWEM 465
>AY330172-1|AAQ16278.1| 170|Anopheles gambiae odorant-binding
protein AgamOBP52 protein.
Length = 170
Score = 27.1 bits (57), Expect = 0.40
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 355 FAITDCANTKTYPACTTARWSILV 284
FA+ C Y C TARWS V
Sbjct: 135 FAVDRCVRLLIYENCPTARWSASV 158
>AJ618922-1|CAF02001.1| 272|Anopheles gambiae odorant-binding
protein OBPjj5a protein.
Length = 272
Score = 27.1 bits (57), Expect = 0.40
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 355 FAITDCANTKTYPACTTARWSILV 284
FA+ C Y C TARWS V
Sbjct: 237 FAVDRCVRLLIYENCPTARWSASV 260
>DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein.
Length = 847
Score = 23.8 bits (49), Expect = 3.7
Identities = 23/91 (25%), Positives = 36/91 (39%)
Frame = -1
Query: 527 PDLFETLQIKGELSHQLVSNIIRQLCEALNDLHKHNFIHNDIKLENVLYFEALDRVYVCD 348
P+L L + E Q + I +Q CEA + + +H L + E D ++ D
Sbjct: 343 PELLHNLNLMVEYCEQDIITIDKQKCEAKD--REEQLLHEKQNLIRISELEK-DYLHTLD 399
Query: 347 YGLCKHENLPSVHDGTLEYFSPEKIRRHNYA 255
L L G++E E+I YA
Sbjct: 400 GALELVRALVEPAGGSIELEECERIFVRLYA 430
>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
Length = 1231
Score = 23.4 bits (48), Expect = 4.9
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -3
Query: 438 RFAQTQFHTQRHKTRKCLIFRSTRSRVCL 352
RF +HKTR I SRVCL
Sbjct: 979 RFVTANLPCNKHKTRVPHILPYESSRVCL 1007
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 22.6 bits (46), Expect = 8.6
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +1
Query: 1 RQNSCFIICL*FVSLQSRLYLVRQYTKSRALTLRTCFKTP 120
R + C++ L++ V ++ +ALT+R C TP
Sbjct: 199 RIDRCYVSSSLETQLRTTDMHVLSFSDHKALTVRLCLPTP 238
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 493,058
Number of Sequences: 2352
Number of extensions: 9115
Number of successful extensions: 40
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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