Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10b06
(417 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41670 Cluster: Uncharacterized 11.0 kDa protein in HE6... 143 1e-33
UniRef50_P41669 Cluster: Uncharacterized 6.4 kDa protein in HE65... 107 9e-23
UniRef50_Q287M1 Cluster: ORF-51; n=2; Nucleopolyhedrovirus|Rep: ... 47 1e-04
UniRef50_Q0N3Z8 Cluster: Ac117-like protein; n=1; Clanis bilinea... 40 0.016
UniRef50_Q9J888 Cluster: ORF47; n=3; Nucleopolyhedrovirus|Rep: O... 38 0.083
UniRef50_Q8V5Q3 Cluster: ORF113; n=4; Nucleopolyhedrovirus|Rep: ... 38 0.083
UniRef50_Q06KF2 Cluster: Putative uncharacterized protein; n=2; ... 36 0.34
UniRef50_Q8J2W6 Cluster: Putative uncharacterized protein; n=1; ... 33 1.8
UniRef50_Q5FQ25 Cluster: 5-Methylthioribose kinase; n=1; Glucono... 33 2.4
UniRef50_Q49UR6 Cluster: Putative extracellular amidase; n=1; St... 32 5.5
UniRef50_O97288 Cluster: Putative uncharacterized protein MAL3P7... 32 5.5
UniRef50_A5E397 Cluster: Putative uncharacterized protein; n=1; ... 31 7.2
UniRef50_UPI000038D385 Cluster: COG2114: Adenylate cyclase, fami... 31 9.6
UniRef50_Q9DH38 Cluster: UL46 tegument phosphoprotein; n=1; Mele... 31 9.6
UniRef50_Q3LWL4 Cluster: Nucleolar rRNA processing protein; n=1;... 31 9.6
UniRef50_Q7R1J7 Cluster: GLP_38_10841_8949; n=1; Giardia lamblia... 31 9.6
>UniRef50_P41670 Cluster: Uncharacterized 11.0 kDa protein in
HE65-PK2 intergenic region; n=5;
Nucleopolyhedrovirus|Rep: Uncharacterized 11.0 kDa
protein in HE65-PK2 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 95
Score = 143 bits (346), Expect = 1e-33
Identities = 69/93 (74%), Positives = 74/93 (79%)
Frame = -3
Query: 280 MHLTANVLLVPNALKKRDVKYIYNTYLKNYSVIEGAMCCNGDCXAVVVXDRXQLQNTEHG 101
MHLTANVLLVPNALKKRDVKYIYNTYLKNYSVIEG MCCNGDC AVVV DR QLQNT+
Sbjct: 1 MHLTANVLLVPNALKKRDVKYIYNTYLKNYSVIEGVMCCNGDCLAVVVLDRNQLQNTDME 60
Query: 100 SVGKFXIQLVTIVELLCKKVCVIVDNYKQVYQK 2
+ I ELLC+K+CVIVDNY + YQK
Sbjct: 61 VLESLEYTSDNI-ELLCEKICVIVDNYDKYYQK 92
>UniRef50_P41669 Cluster: Uncharacterized 6.4 kDa protein in
HE65-PK2 intergenic region; n=4;
Nucleopolyhedrovirus|Rep: Uncharacterized 6.4 kDa
protein in HE65-PK2 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 56
Score = 107 bits (257), Expect = 9e-23
Identities = 48/56 (85%), Positives = 53/56 (94%)
Frame = +3
Query: 216 MYFTSRFLSALGTSNTLAVRCIMLKINSADAELYRPRFIFCATRHFVRHTTLFTLN 383
MYFTSRFLSALGTSNTLAVRC+ +K+N+ DAELYRPRFIFCAT HFVRHTTLFTL+
Sbjct: 1 MYFTSRFLSALGTSNTLAVRCMTVKMNAVDAELYRPRFIFCATSHFVRHTTLFTLS 56
>UniRef50_Q287M1 Cluster: ORF-51; n=2; Nucleopolyhedrovirus|Rep:
ORF-51 - Agrotis segetum nuclear polyhedrosis virus
(AsNPV)
Length = 97
Score = 47.2 bits (107), Expect = 1e-04
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Frame = -3
Query: 229 DVKYIYNTYLKNYSVIEGAMCCNGDCXAVVVXDRXQLQN----TEHGSVGKFXIQLV--- 71
D + IY YLK++ V++ MC NGDC AV V L T+ V K +Q+V
Sbjct: 17 DQQQIYEKYLKHFDVVDAIMCANGDCLAVCVSAADTLNEPLAYTKFKCVKKHLLQIVDRH 76
Query: 70 TIVELLCKKVCVIVDNYKQ 14
VELL +++ IV+ Y +
Sbjct: 77 DDVELLLERMYNIVEMYNE 95
>UniRef50_Q0N3Z8 Cluster: Ac117-like protein; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: Ac117-like protein -
Clanis bilineata nucleopolyhedrosis virus
Length = 91
Score = 40.3 bits (90), Expect = 0.016
Identities = 25/89 (28%), Positives = 41/89 (46%)
Frame = -3
Query: 280 MHLTANVLLVPNALKKRDVKYIYNTYLKNYSVIEGAMCCNGDCXAVVVXDRXQLQNTEHG 101
M L+A V+ V N + +Y YLK++ V + MC NGDC AV V +
Sbjct: 1 MKLSAFVICVSNNFNYNQ-QDMYTLYLKHFDVHDAIMCANGDCLAVCVDQDIIIAQMNVA 59
Query: 100 SVGKFXIQLVTIVELLCKKVCVIVDNYKQ 14
V ++ + L +K+ +V+ Y +
Sbjct: 60 DVMILDTAPLSELTTLVEKIYNVVEMYNE 88
>UniRef50_Q9J888 Cluster: ORF47; n=3; Nucleopolyhedrovirus|Rep:
ORF47 - Spodoptera exigua MNPV
Length = 103
Score = 37.9 bits (84), Expect = 0.083
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -3
Query: 223 KYIYNTYLKNYSVIEGAMCCNGDCXAV 143
K+IY LK + VI+ MC NGDC AV
Sbjct: 22 KFIYENVLKYFDVIDAIMCLNGDCLAV 48
>UniRef50_Q8V5Q3 Cluster: ORF113; n=4; Nucleopolyhedrovirus|Rep:
ORF113 - Helicoverpa zea SNPV
Length = 99
Score = 37.9 bits (84), Expect = 0.083
Identities = 25/92 (27%), Positives = 46/92 (50%)
Frame = -3
Query: 289 FNIMHLTANVLLVPNALKKRDVKYIYNTYLKNYSVIEGAMCCNGDCXAVVVXDRXQLQNT 110
++IM L V+ + N R + IY YL++ V + M C GDC AV V + +
Sbjct: 9 YSIMQLIVFVMHISNDEHLRQDE-IYVKYLQHMDVYDAVMVCTGDCLAVCVSSAPIVLLS 67
Query: 109 EHGSVGKFXIQLVTIVELLCKKVCVIVDNYKQ 14
++ + + ++ ++ LC K+ I + Y+Q
Sbjct: 68 KNLKIIDYGD--LSSIDSLCDKIYDIAEMYEQ 97
>UniRef50_Q06KF2 Cluster: Putative uncharacterized protein; n=2;
Nucleopolyhedrovirus|Rep: Putative uncharacterized
protein - Anticarsia gemmatalis nuclear polyhedrosis
virus (AgMNPV)
Length = 86
Score = 35.9 bits (79), Expect = 0.34
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Frame = -3
Query: 280 MHLTANVLLVPNALKKRDVKYIYNTYLKNYSVIEGAMCCNGDCXA-VVVXDRXQLQNTEH 104
M +TA+VL VPN K + N L+ Y V++ CCNGD A ++V + + + E
Sbjct: 1 MSVTAHVLYVPNV-----PKCLVN--LQKYVVVDLYQCCNGDYLALLLVENNITIIDLEV 53
Query: 103 GSVGKFXIQLVTIVEL--LCKKVCVIVDNYKQVYQK 2
+ +Q T+ ++ L +K+CVI+ Y + K
Sbjct: 54 LEI----VQECTLKDIKDLREKICVIIKLYNEYLNK 85
>UniRef50_Q8J2W6 Cluster: Putative uncharacterized protein; n=1;
Pyrococcus abyssi|Rep: Putative uncharacterized protein
- Pyrococcus abyssi
Length = 248
Score = 33.5 bits (73), Expect = 1.8
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3
Query: 238 KKRDVKYIYNTYLKNYSVIEGAMCCN 161
+KR VKY+Y YL N+S++ G + N
Sbjct: 63 EKRQVKYVYTVYLDNFSIMSGEVFLN 88
>UniRef50_Q5FQ25 Cluster: 5-Methylthioribose kinase; n=1;
Gluconobacter oxydans|Rep: 5-Methylthioribose kinase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 395
Score = 33.1 bits (72), Expect = 2.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 307 PSYIDPGLFFAQPGI-LCVTPHSSHSIKTIMLNFWQ 411
P D GL+ + LC PH + +I+T ML FWQ
Sbjct: 256 PIGFDCGLYLGNLALHLCAAPHKADAIRTEMLAFWQ 291
>UniRef50_Q49UR6 Cluster: Putative extracellular amidase; n=1;
Staphylococcus saprophyticus subsp. saprophyticus ATCC
15305|Rep: Putative extracellular amidase -
Staphylococcus saprophyticus subsp. saprophyticus
(strain ATCC 15305 /DSM 20229)
Length = 432
Score = 31.9 bits (69), Expect = 5.5
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = -3
Query: 340 AQKINLGLYNSASAEFIFNIMHLTANVLLVPNALKKRDVKYIYNTY 203
A+ NL YN S +FI ++H TAN P++ +V Y+YN Y
Sbjct: 110 ARMNNLPKYNYKSGKFIGVVIHETAN----PSSTIDGEVNYMYNNY 151
>UniRef50_O97288 Cluster: Putative uncharacterized protein
MAL3P7.17; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein MAL3P7.17 - Plasmodium
falciparum (isolate 3D7)
Length = 806
Score = 31.9 bits (69), Expect = 5.5
Identities = 18/74 (24%), Positives = 36/74 (48%)
Frame = +2
Query: 83 SKLSNTSMLRVLQLXSVXHHNGXTIAIATHRTFNYTVIFQICIINVFHVPLFERVRNKQY 262
+K +N + + + S ++ I TH + + IC ++ + + NKQ
Sbjct: 237 NKATNINNIDYFKDKSKEQYSDINTQIKTHLYYQHPYDDSICFLSSCNKEHI--ITNKQD 294
Query: 263 ISRQMHNVKNKLGR 304
I+ Q H++KN+LG+
Sbjct: 295 INNQQHDIKNELGK 308
>UniRef50_A5E397 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 1015
Score = 31.5 bits (68), Expect = 7.2
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +2
Query: 191 VIFQICIINVFHVPLFERVRNKQYISRQMHNVKNKLGRRRVI--*TQVYFLRNQAFCASH 364
++ + I NVFH P +R Q I+R H++ + + RV +V R +C +
Sbjct: 867 IVAMLSIQNVFHRPKAQRKLADQVIARWTHSISDHITLLRVYTEFVKVESARKLDWCKRN 926
Query: 365 HTLHTQLRRS 394
H+ LR++
Sbjct: 927 FVQHSSLRKA 936
>UniRef50_UPI000038D385 Cluster: COG2114: Adenylate cyclase, family
3 (some proteins contain HAMP domain); n=1; Nostoc
punctiforme PCC 73102|Rep: COG2114: Adenylate cyclase,
family 3 (some proteins contain HAMP domain) - Nostoc
punctiforme PCC 73102
Length = 433
Score = 31.1 bits (67), Expect = 9.6
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 197 FQICIINVFHVPLFERVRNKQYISRQMHNVKNKLGRRRVI 316
F CII VF V L+ER+R K++ +R+ + + R ++
Sbjct: 191 FWTCIICVFSVFLYERLRKKEFYARKAMELAQQKSERLLL 230
>UniRef50_Q9DH38 Cluster: UL46 tegument phosphoprotein; n=1;
Meleagrid herpesvirus 1|Rep: UL46 tegument
phosphoprotein - Meleagrid herpesvirus 1 (Turkey
herpesvirus)
Length = 494
Score = 31.1 bits (67), Expect = 9.6
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +2
Query: 257 QYISRQMHNVKNKLGRRRVI*TQV--YFLR--NQAFCASHHTLHTQLR 388
QY+ R M+N+K +L R ++ ++V +FL N FC H +T+ R
Sbjct: 48 QYMHRYMYNIKRRLKRAKLSRSEVKRHFLAAYNSYFCERHSIPYTETR 95
>UniRef50_Q3LWL4 Cluster: Nucleolar rRNA processing protein; n=1;
Bigelowiella natans|Rep: Nucleolar rRNA processing
protein - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 365
Score = 31.1 bits (67), Expect = 9.6
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -3
Query: 256 LVPNALKKRDVKYIYNTYLKNYSVI 182
L+ N +KK+++KY Y T L NYS +
Sbjct: 42 LINNTIKKKNLKYSYFTKLNNYSYV 66
>UniRef50_Q7R1J7 Cluster: GLP_38_10841_8949; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_38_10841_8949 - Giardia lamblia ATCC
50803
Length = 630
Score = 31.1 bits (67), Expect = 9.6
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +3
Query: 264 LAVRCIMLKINSADAELYRPRFIFCATRHFVRHTTLFTLN*DDHVELLANT 416
LA+ C M+ + + +L R + C TR T++F+L D +VEL ++T
Sbjct: 268 LAIDCEMIHTSVCENDLARVTVVECNTRTTTPVTSIFSLVYDAYVELPSDT 318
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 412,151,459
Number of Sequences: 1657284
Number of extensions: 7574542
Number of successful extensions: 17626
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17619
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19465676618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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