Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc10b06
         (417 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    25   0.83 
AY344822-1|AAR02433.1|  257|Anopheles gambiae CP5039 protein.          22   7.8  
AY344821-1|AAR02432.1|  257|Anopheles gambiae CP5039 protein.          22   7.8  
AY344820-1|AAR02431.1|  257|Anopheles gambiae CP5039 protein.          22   7.8  
AY344819-1|AAR02430.1|  257|Anopheles gambiae CP5039 protein.          22   7.8  
AY344818-1|AAR02429.1|  257|Anopheles gambiae CP5039 protein.          22   7.8  
AY344817-1|AAR02428.1|  257|Anopheles gambiae CP5039 protein.          22   7.8  
AY344816-1|AAR02427.1|  257|Anopheles gambiae CP5039 protein.          22   7.8  
AY344815-1|AAR02426.1|  257|Anopheles gambiae CP5039 protein.          22   7.8  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    22   7.8  

>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 25.4 bits (53), Expect = 0.83
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 22  NYQLSHILFCITIQRLSLAVFXTFQ 96
           N+ ++ IL+C++ Q    A+F  FQ
Sbjct: 421 NFGINFILYCVSGQNFRKAIFGMFQ 445



 Score = 23.0 bits (47), Expect = 4.5
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +3

Query: 195 FFKYVL*MYFTSRFLSALGTSNTL-AVRCIMLKINSADAELY 317
           FFK  L    +S +L+ALG S+T   +   +  +N  D ++Y
Sbjct: 145 FFKTKLRKLSSSYYLAALGLSDTFYLIGQFVAWLNLVDLKIY 186


>AY344822-1|AAR02433.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -2

Query: 107 AWKCWK 90
           AWKCWK
Sbjct: 46  AWKCWK 51


>AY344821-1|AAR02432.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -2

Query: 107 AWKCWK 90
           AWKCWK
Sbjct: 46  AWKCWK 51


>AY344820-1|AAR02431.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -2

Query: 107 AWKCWK 90
           AWKCWK
Sbjct: 46  AWKCWK 51


>AY344819-1|AAR02430.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -2

Query: 107 AWKCWK 90
           AWKCWK
Sbjct: 46  AWKCWK 51


>AY344818-1|AAR02429.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -2

Query: 107 AWKCWK 90
           AWKCWK
Sbjct: 46  AWKCWK 51


>AY344817-1|AAR02428.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -2

Query: 107 AWKCWK 90
           AWKCWK
Sbjct: 46  AWKCWK 51


>AY344816-1|AAR02427.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -2

Query: 107 AWKCWK 90
           AWKCWK
Sbjct: 46  AWKCWK 51


>AY344815-1|AAR02426.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -2

Query: 107 AWKCWK 90
           AWKCWK
Sbjct: 46  AWKCWK 51


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 377 CEECGVTHKMPGCAKNKP 324
           C  CG+ HKM G   N+P
Sbjct: 141 CNACGLYHKMNG--MNRP 156


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 469,760
Number of Sequences: 2352
Number of extensions: 9837
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34205040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)