Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10a10
(221 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ441131-1|CAD29630.1| 567|Anopheles gambiae putative chitin bi... 23 1.3
AJ439060-17|CAD27768.1| 568|Anopheles gambiae putative chitin b... 23 1.3
AF543192-1|AAN40409.1| 636|Anopheles gambiae amino acid transpo... 23 1.3
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 23 1.7
AY843205-1|AAX14774.1| 478|Anopheles gambiae odorant receptor O... 21 5.1
AY363725-1|AAR14938.1| 478|Anopheles gambiae seven transmembran... 21 5.1
AY330177-1|AAQ16283.1| 166|Anopheles gambiae odorant-binding pr... 21 5.1
AJ618926-1|CAF02005.1| 315|Anopheles gambiae odorant-binding pr... 21 5.1
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 21 6.8
AF043443-1|AAC05668.1| 232|Anopheles gambiae putative pupal-spe... 20 9.0
AF043442-1|AAC05667.1| 231|Anopheles gambiae putative pupal-spe... 20 9.0
AF043441-1|AAC05666.1| 231|Anopheles gambiae putative pupal-spe... 20 9.0
AF043440-1|AAC05665.1| 234|Anopheles gambiae putative pupal-spe... 20 9.0
AF043439-1|AAC05664.1| 239|Anopheles gambiae putative pupal-spe... 20 9.0
AF043438-1|AAC05663.1| 231|Anopheles gambiae putative pupal-spe... 20 9.0
AF043437-1|AAC05662.1| 239|Anopheles gambiae putative pupal-spe... 20 9.0
AF043436-1|AAC05661.1| 263|Anopheles gambiae putative pupal-spe... 20 9.0
AF043435-1|AAC05660.1| 231|Anopheles gambiae pupal-specific cut... 20 9.0
AF043434-1|AAC05659.1| 232|Anopheles gambiae putative pupal-spe... 20 9.0
AF043433-3|AAC05658.1| 231|Anopheles gambiae putative pupal-spe... 20 9.0
AF043433-2|AAC05657.1| 239|Anopheles gambiae putative pupal-spe... 20 9.0
AF043433-1|AAC05656.1| 231|Anopheles gambiae putative pupal-spe... 20 9.0
>AJ441131-1|CAD29630.1| 567|Anopheles gambiae putative chitin
binding protein protein.
Length = 567
Score = 23.0 bits (47), Expect = 1.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +1
Query: 136 PFLWDKNLSNSFEKKLSMLQYSFSC 210
P +DKN ++F K+ + +F+C
Sbjct: 358 PVGYDKNFDDNFTSKVDLPYTTFNC 382
>AJ439060-17|CAD27768.1| 568|Anopheles gambiae putative chitin
binding protein protein.
Length = 568
Score = 23.0 bits (47), Expect = 1.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +1
Query: 136 PFLWDKNLSNSFEKKLSMLQYSFSC 210
P +DKN ++F K+ + +F+C
Sbjct: 366 PVGYDKNFDDNFTSKVDLPYTTFNC 390
>AF543192-1|AAN40409.1| 636|Anopheles gambiae amino acid
transporter Ag_AAT8 protein.
Length = 636
Score = 23.0 bits (47), Expect = 1.3
Identities = 9/39 (23%), Positives = 18/39 (46%)
Frame = +2
Query: 74 ITVIISVQFHKTTNYKRLNPNRFCGIKICQIHLKKNFQC 190
+ +I QF + N++ CG+ + I++ QC
Sbjct: 448 VMTVIKDQFPRVRNWQAATIIAICGVLLGSIYVTPGGQC 486
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 22.6 bits (46), Expect = 1.7
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = +2
Query: 83 IISVQFHKTTNYKRLNPNRFCGIKICQIHLKK 178
++ +Q + ++KR+N R CG I L++
Sbjct: 342 MLLLQRRFSEDFKRINETRVCGENISTFQLEE 373
>AY843205-1|AAX14774.1| 478|Anopheles gambiae odorant receptor
Or83b protein.
Length = 478
Score = 21.0 bits (42), Expect = 5.1
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 193 VTLKVFFQMNLTNFYPTKTV 134
VT ++F +N NFY T +
Sbjct: 86 VTKFIYFAVNSENFYRTLAI 105
>AY363725-1|AAR14938.1| 478|Anopheles gambiae seven transmembrane G
protein-coupledreceptor protein.
Length = 478
Score = 21.0 bits (42), Expect = 5.1
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 193 VTLKVFFQMNLTNFYPTKTV 134
VT ++F +N NFY T +
Sbjct: 86 VTKFIYFAVNSENFYRTLAI 105
>AY330177-1|AAQ16283.1| 166|Anopheles gambiae odorant-binding
protein AgamOBP50 protein.
Length = 166
Score = 21.0 bits (42), Expect = 5.1
Identities = 5/16 (31%), Positives = 12/16 (75%)
Frame = -1
Query: 62 ENLVICNRMRDWITIC 15
++ V+C ++R +T+C
Sbjct: 149 DSSVLCEKVRSGVTVC 164
>AJ618926-1|CAF02005.1| 315|Anopheles gambiae odorant-binding
protein OBPjj6b protein.
Length = 315
Score = 21.0 bits (42), Expect = 5.1
Identities = 5/16 (31%), Positives = 12/16 (75%)
Frame = -1
Query: 62 ENLVICNRMRDWITIC 15
++ V+C ++R +T+C
Sbjct: 298 DSSVLCEKVRSGVTVC 313
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 20.6 bits (41), Expect = 6.8
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +2
Query: 56 NFQX-LQITVIISVQFHKTTNYKRLNPNRFC 145
NF+ L I+ +QF+K ++ +N R C
Sbjct: 3285 NFKFGLHTQEILPLQFNKASSMATINEYRVC 3315
>AF043443-1|AAC05668.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 20.2 bits (40), Expect = 9.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 71 QITVIISVQFHKTTNYK 121
Q T+I SV+ H NY+
Sbjct: 77 QPTIIKSVEHHAPANYE 93
>AF043442-1|AAC05667.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 231
Score = 20.2 bits (40), Expect = 9.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 71 QITVIISVQFHKTTNYK 121
Q T+I SV+ H NY+
Sbjct: 69 QPTIIKSVEHHAPANYE 85
>AF043441-1|AAC05666.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 20.2 bits (40), Expect = 9.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 71 QITVIISVQFHKTTNYK 121
Q T+I SV+ H NY+
Sbjct: 69 QPTIIKSVEHHAPANYE 85
>AF043440-1|AAC05665.1| 234|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 234
Score = 20.2 bits (40), Expect = 9.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 71 QITVIISVQFHKTTNYK 121
Q T+I SV+ H NY+
Sbjct: 69 QPTIIKSVEHHAPANYE 85
>AF043439-1|AAC05664.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 20.2 bits (40), Expect = 9.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 71 QITVIISVQFHKTTNYK 121
Q T+I SV+ H NY+
Sbjct: 77 QPTIIKSVEHHAPANYE 93
>AF043438-1|AAC05663.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 20.2 bits (40), Expect = 9.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 71 QITVIISVQFHKTTNYK 121
Q T+I SV+ H NY+
Sbjct: 69 QPTIIKSVEHHAPANYE 85
>AF043437-1|AAC05662.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 20.2 bits (40), Expect = 9.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 71 QITVIISVQFHKTTNYK 121
Q T+I SV+ H NY+
Sbjct: 77 QPTIIKSVEHHAPANYE 93
>AF043436-1|AAC05661.1| 263|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 263
Score = 20.2 bits (40), Expect = 9.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 71 QITVIISVQFHKTTNYK 121
Q T+I SV+ H NY+
Sbjct: 101 QPTIIKSVEHHAPANYE 117
>AF043435-1|AAC05660.1| 231|Anopheles gambiae pupal-specific
cuticular protein CP2b protein.
Length = 231
Score = 20.2 bits (40), Expect = 9.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 71 QITVIISVQFHKTTNYK 121
Q T+I SV+ H NY+
Sbjct: 69 QPTIIKSVEHHAPANYE 85
>AF043434-1|AAC05659.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 20.2 bits (40), Expect = 9.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 71 QITVIISVQFHKTTNYK 121
Q T+I SV+ H NY+
Sbjct: 77 QPTIIKSVEHHAPANYE 93
>AF043433-3|AAC05658.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 20.2 bits (40), Expect = 9.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 71 QITVIISVQFHKTTNYK 121
Q T+I SV+ H NY+
Sbjct: 69 QPTIIKSVEHHAPANYE 85
>AF043433-2|AAC05657.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 239
Score = 20.2 bits (40), Expect = 9.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 71 QITVIISVQFHKTTNYK 121
Q T+I SV+ H NY+
Sbjct: 77 QPTIIKSVEHHAPANYE 93
>AF043433-1|AAC05656.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 20.2 bits (40), Expect = 9.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 71 QITVIISVQFHKTTNYK 121
Q T+I SV+ H NY+
Sbjct: 69 QPTIIKSVEHHAPANYE 85
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,957
Number of Sequences: 2352
Number of extensions: 2495
Number of successful extensions: 22
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 51
effective length of database: 444,027
effective search space used: 9768594
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -