Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt18l03
(814 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 152 3e-39
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 152 3e-39
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 146 3e-37
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 146 3e-37
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 114 8e-28
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 114 8e-28
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 97 2e-22
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 89 6e-20
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 77 2e-16
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 26 0.48
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 26 0.48
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 26 0.48
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 25 0.83
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 24 1.9
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 24 1.9
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 2.5
M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee homeobox-... 22 5.9
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 152 bits (369), Expect = 3e-39
Identities = 79/229 (34%), Positives = 124/229 (54%), Gaps = 5/229 (2%)
Frame = -3
Query: 812 LKISDVKVDKMVTFFDHFDFDAFNTVYFSKEELKSSPHGYKVRQPRLNHKPFTVTIDIKS 633
LKI VDK++T+F+ FD N + ++ P K+RQ RLNHKPF I I +
Sbjct: 449 LKIESFTVDKLITYFEQFDTTINNGLLLEEQRNDDKPFLIKIRQYRLNHKPFNFHITINA 508
Query: 632 DVATNAVVKMFLGPKYDENGFPFSLEDNWMNFYELDWFVQKVNPGQSQITRSSTDFAFFK 453
D A +++F+GPKYD + + ++ FYE+D ++ +N G ++ITR+S D F
Sbjct: 509 DKPMKAAIRIFIGPKYDSHHKLIEIPEDLKYFYEIDNWMLDLNSGLNKITRNSLDCFFTM 568
Query: 452 EDSLPMAEIYKLLDQGKIPTDMFNSSDTM---PSRLMLPKGTYDGFPFQLFVFVYPY--E 288
D P Y+ ++ F ++ + P RL+LP+G +G PFQLF++V P E
Sbjct: 569 NDLEPSEIFYEKIETSLNSDKPFTYNERIFGFPGRLLLPRGKKEGMPFQLFLYVSPVSSE 628
Query: 287 PTPKESEPFKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFKKVLVYHEGE 141
S + D + FG+P D+P+ ++ PNM FK +L+YH+ E
Sbjct: 629 YNQYNSRIWGGYKFDKRSFGFPLDKPLYDFNYEGPNMLFKDILIYHKDE 677
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 152 bits (369), Expect = 3e-39
Identities = 79/229 (34%), Positives = 124/229 (54%), Gaps = 5/229 (2%)
Frame = -3
Query: 812 LKISDVKVDKMVTFFDHFDFDAFNTVYFSKEELKSSPHGYKVRQPRLNHKPFTVTIDIKS 633
LKI VDK++T+F+ FD N + ++ P K+RQ RLNHKPF I I +
Sbjct: 449 LKIESFTVDKLITYFEQFDTTINNGLLLEEQRNDDKPFLIKIRQYRLNHKPFNFHITINA 508
Query: 632 DVATNAVVKMFLGPKYDENGFPFSLEDNWMNFYELDWFVQKVNPGQSQITRSSTDFAFFK 453
D A +++F+GPKYD + + ++ FYE+D ++ +N G ++ITR+S D F
Sbjct: 509 DKPMKAAIRIFIGPKYDSHHKLIEIPEDLKYFYEIDNWMLDLNSGLNKITRNSLDCFFTM 568
Query: 452 EDSLPMAEIYKLLDQGKIPTDMFNSSDTM---PSRLMLPKGTYDGFPFQLFVFVYPY--E 288
D P Y+ ++ F ++ + P RL+LP+G +G PFQLF++V P E
Sbjct: 569 NDLEPSEIFYEKIETSLNSDKPFTYNERIFGFPGRLLLPRGKKEGMPFQLFLYVSPVSSE 628
Query: 287 PTPKESEPFKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFKKVLVYHEGE 141
S + D + FG+P D+P+ ++ PNM FK +L+YH+ E
Sbjct: 629 YNQYNSRIWGGYKFDKRSFGFPLDKPLYDFNYEGPNMLFKDILIYHKDE 677
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 146 bits (353), Expect = 3e-37
Identities = 82/227 (36%), Positives = 121/227 (53%), Gaps = 6/227 (2%)
Frame = -3
Query: 812 LKISDVKVDKMVTFFDHFDFDAFNTVYFSKEELKSSPHGYKVRQPRLNHKPFTVTIDIKS 633
+ I V VDK++T+FDHF+ N V + K+ K RQ RLNHKPFT I + S
Sbjct: 448 VSIESVTVDKLITYFDHFESMLNNGVSI-QSHAKAKNTMIKARQYRLNHKPFTYHIVVNS 506
Query: 632 DVATNAVVKMFLGPKYDENGFPFSLEDNWMNFYELDWFVQKVNPGQSQITRSSTDFAFFK 453
D +V++FLGPKYDE G L N+MNF ++D FV + G + I R+S + F
Sbjct: 507 DKNVKGMVRIFLGPKYDEFGHEVDLVHNYMNFMQMDEFVVNLKSGSNTIERNSHESVFVV 566
Query: 452 EDSLPMAEIYKLLDQGKIPTDMFNSSDT---MPSRLMLPKGTYDGFPFQLFVFVYPYEPT 282
D +P +Y L + ++ F S P RL+LPKG +G P+ + V V P++ +
Sbjct: 567 PDEVPSDVLYNRLVVSEDGSETFKYSSQPYGFPERLLLPKGKKEGMPYNVLVVVSPFDDS 626
Query: 281 ---PKESEPFKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFKKVLVYH 150
+S + + D + G+P D+PV P N+ K+VLV+H
Sbjct: 627 NVVQIDSPVWGRHIYDGRAMGFPLDKPVDPLLLVLSNIHVKEVLVHH 673
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 146 bits (353), Expect = 3e-37
Identities = 82/227 (36%), Positives = 121/227 (53%), Gaps = 6/227 (2%)
Frame = -3
Query: 812 LKISDVKVDKMVTFFDHFDFDAFNTVYFSKEELKSSPHGYKVRQPRLNHKPFTVTIDIKS 633
+ I V VDK++T+FDHF+ N V + K+ K RQ RLNHKPFT I + S
Sbjct: 448 VSIESVTVDKLITYFDHFESMLNNGVSI-QSHAKAKNTMIKARQYRLNHKPFTYHIVVNS 506
Query: 632 DVATNAVVKMFLGPKYDENGFPFSLEDNWMNFYELDWFVQKVNPGQSQITRSSTDFAFFK 453
D +V++FLGPKYDE G L N+MNF ++D FV + G + I R+S + F
Sbjct: 507 DKNVKGMVRIFLGPKYDEFGHEVDLVHNYMNFMQMDEFVVNLKSGSNTIERNSHESVFVV 566
Query: 452 EDSLPMAEIYKLLDQGKIPTDMFNSSDT---MPSRLMLPKGTYDGFPFQLFVFVYPYEPT 282
D +P +Y L + ++ F S P RL+LPKG +G P+ + V V P++ +
Sbjct: 567 PDEVPSDVLYNRLVVSEDGSETFKYSSQPYGFPERLLLPKGKKEGMPYNVLVVVSPFDDS 626
Query: 281 ---PKESEPFKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFKKVLVYH 150
+S + + D + G+P D+PV P N+ K+VLV+H
Sbjct: 627 NVVQIDSPVWGRHIYDGRAMGFPLDKPVDPLLLVLSNIHVKEVLVHH 673
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 114 bits (275), Expect = 8e-28
Identities = 71/229 (31%), Positives = 118/229 (51%), Gaps = 8/229 (3%)
Frame = -3
Query: 812 LKISDVKVDKMVTFFDHFDFDAFNTVYFSKEELKSSPH-GYKVRQPRLNHKPFTVTIDIK 636
+K V +DK+ T+FD D N V + E K + K R+ +N++ FT I+I
Sbjct: 451 VKFESVNIDKLYTYFDKCDTLINNAV--AVENFKGGMYLRLKARRACMNYERFTYKININ 508
Query: 635 SDVATNAVVKMFLGPKYDENGFPFS-LEDNWMNFYELDWFVQKVNPGQSQITRSSTDFAF 459
SD T ++++FLGP +DE L+ + F E+D F + PG + I R S++ F
Sbjct: 509 SDKETKGMMRIFLGPAFDEIKHDMVYLQKYFYLFMEMDRFAVTLRPGSNSIERQSSESPF 568
Query: 458 FKEDSLPMAEIYKLLDQGKIPTDMFNSSDTM---PSRLMLPKGTYDGFPFQLFVFVYPYE 288
+P Y L++ ++ F S+ M P RL+LP+G +G +++F F+ +
Sbjct: 569 TTSTIMPSDIFYDKLNKAIGGSEPFTYSEKMLGFPERLILPRGKPEGMRYKMFFFLSSMD 628
Query: 287 PTPKESEP---FKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFKKVLVYH 150
+ +S + + D+K FG+P DRP+ F PNM+FK V +Y+
Sbjct: 629 ESNTKSYEIPLYGKMTLDDKVFGFPLDRPMWAWNFTIPNMYFKDVFIYN 677
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 114 bits (275), Expect = 8e-28
Identities = 71/229 (31%), Positives = 118/229 (51%), Gaps = 8/229 (3%)
Frame = -3
Query: 812 LKISDVKVDKMVTFFDHFDFDAFNTVYFSKEELKSSPH-GYKVRQPRLNHKPFTVTIDIK 636
+K V +DK+ T+FD D N V + E K + K R+ +N++ FT I+I
Sbjct: 451 VKFESVNIDKLYTYFDKCDTLINNAV--AVENFKGGMYLRLKARRACMNYERFTYKININ 508
Query: 635 SDVATNAVVKMFLGPKYDENGFPFS-LEDNWMNFYELDWFVQKVNPGQSQITRSSTDFAF 459
SD T ++++FLGP +DE L+ + F E+D F + PG + I R S++ F
Sbjct: 509 SDKETKGMMRIFLGPAFDEIKHDMVYLQKYFYLFMEMDRFAVTLRPGSNSIERQSSESPF 568
Query: 458 FKEDSLPMAEIYKLLDQGKIPTDMFNSSDTM---PSRLMLPKGTYDGFPFQLFVFVYPYE 288
+P Y L++ ++ F S+ M P RL+LP+G +G +++F F+ +
Sbjct: 569 TTSTIMPSDIFYDKLNKAIGGSEPFTYSEKMLGFPERLILPRGKPEGMRYKMFFFLSSMD 628
Query: 287 PTPKESEP---FKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFKKVLVYH 150
+ +S + + D+K FG+P DRP+ F PNM+FK V +Y+
Sbjct: 629 ESNTKSYEIPLYGKMTLDDKVFGFPLDRPMWAWNFTIPNMYFKDVFIYN 677
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 97.1 bits (231), Expect = 2e-22
Identities = 51/125 (40%), Positives = 70/125 (56%)
Frame = -3
Query: 812 LKISDVKVDKMVTFFDHFDFDAFNTVYFSKEELKSSPHGYKVRQPRLNHKPFTVTIDIKS 633
+ I V VDK++T+FDHF+ N V + K+ K RQ RLNHKPFT I + S
Sbjct: 74 VSIESVTVDKLITYFDHFESMLNNGVSI-QSHAKAKNTMIKARQYRLNHKPFTYHIVVNS 132
Query: 632 DVATNAVVKMFLGPKYDENGFPFSLEDNWMNFYELDWFVQKVNPGQSQITRSSTDFAFFK 453
D +V++FLGPKYDE G L N+MNF ++D FV + G + I R+S + F
Sbjct: 133 DKNVKGMVRIFLGPKYDEFGHEVDLVHNYMNFMQMDEFVVNLKSGSNTIERNSHESXFVV 192
Query: 452 EDSLP 438
+P
Sbjct: 193 PTRVP 197
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 88.6 bits (210), Expect = 6e-20
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 8/196 (4%)
Frame = -3
Query: 806 ISDVKVDKMVTFFDHF--DFDAFNTVYFSKEELKSSPHGYKVRQPRLNHKPFTVTIDIKS 633
I +V V ++VT F F D DA +++ + + + RL+H+P+ I + S
Sbjct: 467 IQNVDVSQLVTLFTDFYVDLDAVTGHQSQQQQEEQTQSRVRAHLKRLDHQPYQYKIAVHS 526
Query: 632 DV-ATNAVVKMFLGPKYDENGFPFSLEDNWMNFYELDWFVQKVNPGQSQITRSSTDFAFF 456
+ AVV++FLGPK+D G P S+ N F ELD F+Q ++ G++ I R+S
Sbjct: 527 EQNVPGAVVRVFLGPKHDHQGRPISISKNQHLFVELDQFIQNLHAGENTIIRNSQQAPGQ 586
Query: 455 KEDSLPMAEIYKLLDQGKIPTDMFNSSD-----TMPSRLMLPKGTYDGFPFQLFVFVYPY 291
D ++I + ++ + F ++ + P+RL LPKG GFP Q V +
Sbjct: 587 SPDWPSTSQIQRGVNAAIRSQEPFYITEPHQIFSFPARLSLPKGQPQGFPLQFLVVISSS 646
Query: 290 EPTPKESEPFKSVVPD 243
P + P+ V+P+
Sbjct: 647 NPL---NVPYGPVIPE 659
Score = 43.6 bits (98), Expect = 2e-06
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = -3
Query: 245 DNKPFGYPFDRPVLPQYFKQPNMFFKKVLVYHEGE 141
D KP G+P DRP+ PN+F K VLV+H+G+
Sbjct: 969 DGKPLGFPLDRPLSLGALSVPNIFVKDVLVFHQGQ 1003
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase protein.
Length = 693
Score = 77.0 bits (181), Expect = 2e-16
Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 21/189 (11%)
Frame = -3
Query: 716 LKSSPHGYKV-RQPRLNHKPFTVTIDI--KSDVATNAVVKMFLGPKYDENGFPFSLEDNW 546
L +P G + R LNH F+ TI I +++ + V++F+GPK DE G PF+ +
Sbjct: 463 LDFTPRGAVLARFTHLNHADFSYTIVINNRNNTSMKGTVRIFIGPKEDERGLPFTFREQK 522
Query: 545 MNFYELDWFVQKVNPGQSQITRSSTDFAFFKEDSLPMAEIYKLLDQGK-IPTDMFNSSDT 369
ELD F + PG++ I + ST + ++P ++ LD+ + I D D
Sbjct: 523 NLMIELDKFPITLQPGKNTIEQKSTKSSV----TIPFERTFRNLDENRPIGGDSLERFDF 578
Query: 368 M----PSRLMLPKGTYDGFPFQLFVFVYPY-EPTPKESEPF------------KSVVPDN 240
P +++PKG +GF +LFV V Y + +++EP PD
Sbjct: 579 CGCGWPQHMLIPKGNKEGFAMELFVMVSDYKDDRVEQNEPIGCKDASSYCGLRDRKYPDA 638
Query: 239 KPFGYPFDR 213
+ GYPFDR
Sbjct: 639 RAMGYPFDR 647
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 25.8 bits (54), Expect = 0.48
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +1
Query: 319 KGNPSYVPLGSISLEGIVSEEL 384
KG+ ++VPL ++S EG+ S++L
Sbjct: 587 KGDVAFVPLTALSEEGVQSKDL 608
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 25.8 bits (54), Expect = 0.48
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +1
Query: 319 KGNPSYVPLGSISLEGIVSEEL 384
KG+ ++VPL ++S EG+ S++L
Sbjct: 587 KGDVAFVPLTALSEEGVQSKDL 608
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 25.8 bits (54), Expect = 0.48
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +1
Query: 319 KGNPSYVPLGSISLEGIVSEEL 384
KG+ ++VPL ++S EG+ S++L
Sbjct: 587 KGDVAFVPLTALSEEGVQSKDL 608
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 25.0 bits (52), Expect = 0.83
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = -3
Query: 569 PFSLEDNWMNFYELDWFVQKVNPGQSQITRSSTDF 465
PF+ + +LD ++ + GQ+ + R+ST+F
Sbjct: 512 PFNASPTTWSPADLDRALEAIRSGQTSVQRASTEF 546
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 23.8 bits (49), Expect = 1.9
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 797 VKVDKMVTFFDHFDFDAFNTVYFS 726
+ +DK+ FF F F N VY+S
Sbjct: 357 IYIDKVSRFFFPFSFLILNVVYWS 380
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.8 bits (49), Expect = 1.9
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -1
Query: 175 SSRRSWSTMKENYSPIYLTFLTIHQI 98
S+ +++ NY P+Y + I QI
Sbjct: 319 SNNYNYNNYNNNYKPLYYNIINIEQI 344
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 23.4 bits (48), Expect = 2.5
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -1
Query: 247 RTTNHSVIHSIAPFFLSTSNNLT 179
R + HSV+HS S+++N+T
Sbjct: 935 RLSGHSVLHSAQSVVASSASNVT 957
>M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H17. ).
Length = 79
Score = 22.2 bits (45), Expect = 5.9
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +3
Query: 336 CTLRQHQPRR 365
CTLR+H+P R
Sbjct: 1 CTLRKHKPNR 10
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,999
Number of Sequences: 438
Number of extensions: 4543
Number of successful extensions: 62
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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