Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt18j05
         (860 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB065609-1|BAC05836.1|  313|Homo sapiens seven transmembrane hel...    34   0.76 
L05147-1|AAA35777.1|  185|Homo sapiens phosphatase tyrosine/seri...    31   7.1  
BT019522-1|AAV38329.1|  185|Homo sapiens dual specificity phosph...    31   7.1  
BC035701-1|AAH35701.1|  144|Homo sapiens DUSP3 protein protein.        31   7.1  
BC002682-1|AAH02682.1|  185|Homo sapiens dual specificity phosph...    31   7.1  

>AB065609-1|BAC05836.1|  313|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 313

 Score = 33.9 bits (74), Expect = 0.76
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = -1

Query: 629 ILLFVYNILIIILEV*FCKRQMREMSLFTESSTMVVTVFLP*VMI 495
           +LLF Y I++I L   FC+ Q +  S      T+V  +F+P V I
Sbjct: 214 VLLFSYAIILITLRTHFCQGQNKVFSTCASHLTVVSLIFVPCVFI 258


>L05147-1|AAA35777.1|  185|Homo sapiens phosphatase tyrosine/serine
           protein.
          Length = 185

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +2

Query: 83  TNENLYLDSGTRYLTVRNFQTSNANLKVTFE 175
           TN N Y DSG  YL ++   T   NL   FE
Sbjct: 73  TNANFYKDSGITYLGIKANDTQEFNLSAYFE 103


>BT019522-1|AAV38329.1|  185|Homo sapiens dual specificity
           phosphatase 3 (vaccinia virus phosphatase VH1-related)
           protein.
          Length = 185

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +2

Query: 83  TNENLYLDSGTRYLTVRNFQTSNANLKVTFE 175
           TN N Y DSG  YL ++   T   NL   FE
Sbjct: 73  TNANFYKDSGITYLGIKANDTQEFNLSAYFE 103


>BC035701-1|AAH35701.1|  144|Homo sapiens DUSP3 protein protein.
          Length = 144

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +2

Query: 83  TNENLYLDSGTRYLTVRNFQTSNANLKVTFE 175
           TN N Y DSG  YL ++   T   NL   FE
Sbjct: 32  TNANFYKDSGITYLGIKANDTQEFNLSAYFE 62


>BC002682-1|AAH02682.1|  185|Homo sapiens dual specificity
           phosphatase 3 (vaccinia virus phosphatase VH1-related)
           protein.
          Length = 185

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +2

Query: 83  TNENLYLDSGTRYLTVRNFQTSNANLKVTFE 175
           TN N Y DSG  YL ++   T   NL   FE
Sbjct: 73  TNANFYKDSGITYLGIKANDTQEFNLSAYFE 103


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,779,880
Number of Sequences: 237096
Number of extensions: 2141670
Number of successful extensions: 6576
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6576
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)