Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt18j02
         (801 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC042151-1|AAH42151.1|  523|Homo sapiens glycerate kinase protein.     76   1e-13
BC021896-1|AAH21896.1|  457|Homo sapiens GLYCTK protein protein.       76   1e-13
AY189286-1|AAO86730.1|  187|Homo sapiens LP5910 protein protein.       76   1e-13
AY134474-1|AAM95456.1|  457|Homo sapiens HBeAg-binding protein 4...    76   1e-13
AF448855-1|AAP41923.1|  523|Homo sapiens glycerate kinase 1 prot...    76   1e-13
AK124016-1|BAC85753.1|  144|Homo sapiens protein ( Homo sapiens ...    32   2.8  

>BC042151-1|AAH42151.1|  523|Homo sapiens glycerate kinase protein.
          Length = 523

 Score = 76.2 bits (179), Expect = 1e-13
 Identities = 37/78 (47%), Positives = 49/78 (62%)
 Frame = -3

Query: 793 LNDFDIFILSAGTDGIDGPTDAAGAIGYLNLISESTADGLDVDKYLANNDTYNFFKLFKN 614
           L   D+  LS GTDG DGPT+AAGA     L S++ A+GLD+  +LA+ND++ FF   + 
Sbjct: 439 LGPIDVLFLSGGTDGQDGPTEAAGAWVTPELASQAAAEGLDIATFLAHNDSHTFFCCLQG 498

Query: 613 DHLHVFTGHTNTNVMDIH 560
               + TG T TNVMD H
Sbjct: 499 GAHLLHTGMTGTNVMDTH 516


>BC021896-1|AAH21896.1|  457|Homo sapiens GLYCTK protein protein.
          Length = 457

 Score = 76.2 bits (179), Expect = 1e-13
 Identities = 37/78 (47%), Positives = 49/78 (62%)
 Frame = -3

Query: 793 LNDFDIFILSAGTDGIDGPTDAAGAIGYLNLISESTADGLDVDKYLANNDTYNFFKLFKN 614
           L   D+  LS GTDG DGPT+AAGA     L S++ A+GLD+  +LA+ND++ FF   + 
Sbjct: 373 LGPIDVLFLSGGTDGQDGPTEAAGAWVTPELASQAAAEGLDIATFLAHNDSHTFFCCLQG 432

Query: 613 DHLHVFTGHTNTNVMDIH 560
               + TG T TNVMD H
Sbjct: 433 GAHLLHTGMTGTNVMDTH 450


>AY189286-1|AAO86730.1|  187|Homo sapiens LP5910 protein protein.
          Length = 187

 Score = 76.2 bits (179), Expect = 1e-13
 Identities = 37/78 (47%), Positives = 49/78 (62%)
 Frame = -3

Query: 793 LNDFDIFILSAGTDGIDGPTDAAGAIGYLNLISESTADGLDVDKYLANNDTYNFFKLFKN 614
           L   D+  LS GTDG DGPT+AAGA     L S++ A+GLD+  +LA+ND++ FF   + 
Sbjct: 103 LGPIDVLFLSGGTDGQDGPTEAAGAWVTPELASQAAAEGLDIATFLAHNDSHTFFCCLQG 162

Query: 613 DHLHVFTGHTNTNVMDIH 560
               + TG T TNVMD H
Sbjct: 163 GAHLLHTGMTGTNVMDTH 180


>AY134474-1|AAM95456.1|  457|Homo sapiens HBeAg-binding protein 4
           protein.
          Length = 457

 Score = 76.2 bits (179), Expect = 1e-13
 Identities = 37/78 (47%), Positives = 49/78 (62%)
 Frame = -3

Query: 793 LNDFDIFILSAGTDGIDGPTDAAGAIGYLNLISESTADGLDVDKYLANNDTYNFFKLFKN 614
           L   D+  LS GTDG DGPT+AAGA     L S++ A+GLD+  +LA+ND++ FF   + 
Sbjct: 373 LGPIDVLFLSGGTDGQDGPTEAAGAWVTPELASQAAAEGLDIATFLAHNDSHTFFCCLQG 432

Query: 613 DHLHVFTGHTNTNVMDIH 560
               + TG T TNVMD H
Sbjct: 433 GAHLLHTGMTGTNVMDTH 450


>AF448855-1|AAP41923.1|  523|Homo sapiens glycerate kinase 1
           protein.
          Length = 523

 Score = 76.2 bits (179), Expect = 1e-13
 Identities = 37/78 (47%), Positives = 49/78 (62%)
 Frame = -3

Query: 793 LNDFDIFILSAGTDGIDGPTDAAGAIGYLNLISESTADGLDVDKYLANNDTYNFFKLFKN 614
           L   D+  LS GTDG DGPT+AAGA     L S++ A+GLD+  +LA+ND++ FF   + 
Sbjct: 439 LGPIDVLFLSGGTDGQDGPTEAAGAWVTPELASQAAAEGLDIATFLAHNDSHTFFCCLQG 498

Query: 613 DHLHVFTGHTNTNVMDIH 560
               + TG T TNVMD H
Sbjct: 499 GAHLLHTGMTGTNVMDTH 516


>AK124016-1|BAC85753.1|  144|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42022 fis, clone SPLEN2034678. ).
          Length = 144

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = +3

Query: 15  NHTGAIRFEIIVASFFFYYSVIKSKILNFMLSSLYKRVFYIFLQRILGSFHSTVGVTLTA 194
           +H G  R  +  A    +   + S IL+  L  + K +FY F  R+L  F   +   L++
Sbjct: 55  SHCGTARHSLCPARSGTFLDPVSSIILDCQLPEVRKLIFYFFSLRLLNLFQLHLSTELSS 114

Query: 195 KQCL 206
            Q L
Sbjct: 115 YQVL 118


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,598,334
Number of Sequences: 237096
Number of extensions: 1990226
Number of successful extensions: 3607
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3607
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)