Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt18h04
(822 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U52077-1|AAC52010.1| 343|Homo sapiens mariner transposase protein. 98 3e-20
DQ341316-1|ABC72087.1| 344|Homo sapiens SETMAR protein. 98 4e-20
BC008931-1|AAH08931.2| 429|Homo sapiens SETMAR protein protein. 98 4e-20
AY952295-1|AAY29570.1| 671|Homo sapiens metnase protein. 98 4e-20
AK222734-1|BAD96454.1| 671|Homo sapiens SET domain and mariner ... 98 4e-20
AF054989-1|AAC09350.1| 671|Homo sapiens unknown protein. 98 4e-20
U80776-1|AAC52012.1| 671|Homo sapiens unknown protein. 95 4e-19
U49974-1|AAC52011.1| 351|Homo sapiens mariner transposase protein. 42 0.002
BC040665-1|AAH40665.1| 254|Homo sapiens LOC387790 protein protein. 42 0.003
AK095089-1|BAC04485.1| 210|Homo sapiens protein ( Homo sapiens ... 42 0.003
BC010017-1|AAH10017.1| 292|Homo sapiens Unknown (protein for IM... 33 1.6
>U52077-1|AAC52010.1| 343|Homo sapiens mariner transposase protein.
Length = 343
Score = 98.3 bits (234), Expect = 3e-20
Identities = 54/139 (38%), Positives = 73/139 (52%)
Frame = +2
Query: 341 AIHLKILLQKR*KCNTSREKKNCHVNGPSAVSVRVAQIWFKLF*SGNFYVKDERRSGHPI 520
AI L R T+R N GP + R Q WFK F G+ ++DE RSG P
Sbjct: 12 AIFLFEFKMGRKAAETTRNINNAF--GPGTANERTVQWWFKKFCKGDESLEDEERSGRPS 69
Query: 521 TDKMDAIFEKVEQDRHVSSYDVAEQLGIDHKTVLAHLKKTGYTKKLDIWVPHELTERNLM 700
D + +E D ++ +VAE+L +DH TV+ HLK+ G KKLD WVPHEL+E
Sbjct: 70 EVDNDQLRAIIEADPLTTTREVAEELNVDHSTVVRHLKQIGKVKKLDKWVPHELSENQKN 129
Query: 701 NRVLICDFLLRRSETDPFL 757
R + L+ R+ +PFL
Sbjct: 130 RRFEVSSSLILRNNNEPFL 148
Score = 35.5 bits (78), Expect = 0.23
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 742 NRPIFEKLITGDEKWITYDKNVRKMSW 822
N P ++++T DEKWI YD R W
Sbjct: 144 NEPFLDRIVTCDEKWILYDNRRRPAQW 170
>DQ341316-1|ABC72087.1| 344|Homo sapiens SETMAR protein.
Length = 344
Score = 97.9 bits (233), Expect = 4e-20
Identities = 54/139 (38%), Positives = 73/139 (52%)
Frame = +2
Query: 341 AIHLKILLQKR*KCNTSREKKNCHVNGPSAVSVRVAQIWFKLF*SGNFYVKDERRSGHPI 520
AI L R T+R N GP + R Q WFK F G+ ++DE RSG P
Sbjct: 13 AIFLFEFKMGRKAAETTRNINNAF--GPGTANERTVQWWFKKFCKGDESLEDEERSGRPS 70
Query: 521 TDKMDAIFEKVEQDRHVSSYDVAEQLGIDHKTVLAHLKKTGYTKKLDIWVPHELTERNLM 700
D + +E D ++ +VAE+L ++H TV+ HLK+ G KKLD WVPHELTE
Sbjct: 71 EVDNDQLRAIIEADPLTTTREVAEELNVNHSTVVRHLKQIGKVKKLDKWVPHELTENQKN 130
Query: 701 NRVLICDFLLRRSETDPFL 757
R + L+ R+ +PFL
Sbjct: 131 RRFEVSSSLILRNHNEPFL 149
Score = 35.9 bits (79), Expect = 0.18
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 742 NRPIFEKLITGDEKWITYDKNVRKMSW 822
N P ++++T DEKWI YD R W
Sbjct: 145 NEPFLDRIVTCDEKWILYDNRRRSAQW 171
>BC008931-1|AAH08931.2| 429|Homo sapiens SETMAR protein protein.
Length = 429
Score = 97.9 bits (233), Expect = 4e-20
Identities = 54/139 (38%), Positives = 73/139 (52%)
Frame = +2
Query: 341 AIHLKILLQKR*KCNTSREKKNCHVNGPSAVSVRVAQIWFKLF*SGNFYVKDERRSGHPI 520
AI L R T+R N GP + R Q WFK F G+ ++DE RSG P
Sbjct: 98 AIFLFEFKMGRKAAETTRNINNAF--GPGTANERTVQWWFKKFCKGDESLEDEERSGRPS 155
Query: 521 TDKMDAIFEKVEQDRHVSSYDVAEQLGIDHKTVLAHLKKTGYTKKLDIWVPHELTERNLM 700
D + +E D ++ +VAE+L ++H TV+ HLK+ G KKLD WVPHELTE
Sbjct: 156 EVDNDQLRAIIEADPLTTTREVAEELNVNHSTVVRHLKQIGKVKKLDKWVPHELTENQKN 215
Query: 701 NRVLICDFLLRRSETDPFL 757
R + L+ R+ +PFL
Sbjct: 216 RRFEVSSSLILRNHNEPFL 234
Score = 35.9 bits (79), Expect = 0.18
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 742 NRPIFEKLITGDEKWITYDKNVRKMSW 822
N P ++++T DEKWI YD R W
Sbjct: 230 NEPFLDRIVTCDEKWILYDNRRRSAQW 256
>AY952295-1|AAY29570.1| 671|Homo sapiens metnase protein.
Length = 671
Score = 97.9 bits (233), Expect = 4e-20
Identities = 54/139 (38%), Positives = 73/139 (52%)
Frame = +2
Query: 341 AIHLKILLQKR*KCNTSREKKNCHVNGPSAVSVRVAQIWFKLF*SGNFYVKDERRSGHPI 520
AI L R T+R N GP + R Q WFK F G+ ++DE RSG P
Sbjct: 340 AIFLFEFKMGRKAAETTRNINNAF--GPGTANERTVQWWFKKFCKGDESLEDEERSGRPS 397
Query: 521 TDKMDAIFEKVEQDRHVSSYDVAEQLGIDHKTVLAHLKKTGYTKKLDIWVPHELTERNLM 700
D + +E D ++ +VAE+L ++H TV+ HLK+ G KKLD WVPHELTE
Sbjct: 398 EVDNDQLRAIIEADPLTTTREVAEELNVNHSTVVRHLKQIGKVKKLDKWVPHELTENQKN 457
Query: 701 NRVLICDFLLRRSETDPFL 757
R + L+ R+ +PFL
Sbjct: 458 RRFEVSSSLILRNHNEPFL 476
Score = 35.9 bits (79), Expect = 0.18
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 742 NRPIFEKLITGDEKWITYDKNVRKMSW 822
N P ++++T DEKWI YD R W
Sbjct: 472 NEPFLDRIVTCDEKWILYDNRRRSAQW 498
>AK222734-1|BAD96454.1| 671|Homo sapiens SET domain and mariner
transposase fusion gene variant protein.
Length = 671
Score = 97.9 bits (233), Expect = 4e-20
Identities = 54/139 (38%), Positives = 73/139 (52%)
Frame = +2
Query: 341 AIHLKILLQKR*KCNTSREKKNCHVNGPSAVSVRVAQIWFKLF*SGNFYVKDERRSGHPI 520
AI L R T+R N GP + R Q WFK F G+ ++DE RSG P
Sbjct: 340 AIFLFEFKMGRKAAETTRNINNAF--GPGTANERTVQWWFKKFCKGDESLEDEERSGRPS 397
Query: 521 TDKMDAIFEKVEQDRHVSSYDVAEQLGIDHKTVLAHLKKTGYTKKLDIWVPHELTERNLM 700
D + +E D ++ +VAE+L ++H TV+ HLK+ G KKLD WVPHELTE
Sbjct: 398 EVDNDQLRAIIEADPLTTTREVAEELNVNHSTVVRHLKQIGKVKKLDKWVPHELTENQKN 457
Query: 701 NRVLICDFLLRRSETDPFL 757
R + L+ R+ +PFL
Sbjct: 458 RRFEVSSSLILRNHNEPFL 476
Score = 35.9 bits (79), Expect = 0.18
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 742 NRPIFEKLITGDEKWITYDKNVRKMSW 822
N P ++++T DEKWI YD R W
Sbjct: 472 NEPFLDRIVTCDEKWILYDNRRRSAQW 498
>AF054989-1|AAC09350.1| 671|Homo sapiens unknown protein.
Length = 671
Score = 97.9 bits (233), Expect = 4e-20
Identities = 54/139 (38%), Positives = 73/139 (52%)
Frame = +2
Query: 341 AIHLKILLQKR*KCNTSREKKNCHVNGPSAVSVRVAQIWFKLF*SGNFYVKDERRSGHPI 520
AI L R T+R N GP + R Q WFK F G+ ++DE RSG P
Sbjct: 340 AIFLFEFKMGRKAAETTRNINNAF--GPGTANERTVQWWFKKFCKGDESLEDEERSGRPS 397
Query: 521 TDKMDAIFEKVEQDRHVSSYDVAEQLGIDHKTVLAHLKKTGYTKKLDIWVPHELTERNLM 700
D + +E D ++ +VAE+L ++H TV+ HLK+ G KKLD WVPHELTE
Sbjct: 398 EVDNDQLRAIIEADPLTTTREVAEELNVNHSTVVRHLKQIGKVKKLDKWVPHELTENQKN 457
Query: 701 NRVLICDFLLRRSETDPFL 757
R + L+ R+ +PFL
Sbjct: 458 RRFEVSSSLILRNHNEPFL 476
Score = 35.9 bits (79), Expect = 0.18
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 742 NRPIFEKLITGDEKWITYDKNVRKMSW 822
N P ++++T DEKWI YD R W
Sbjct: 472 NEPFLDRIVTCDEKWILYDNRRRSAQW 498
>U80776-1|AAC52012.1| 671|Homo sapiens unknown protein.
Length = 671
Score = 94.7 bits (225), Expect = 4e-19
Identities = 53/139 (38%), Positives = 72/139 (51%)
Frame = +2
Query: 341 AIHLKILLQKR*KCNTSREKKNCHVNGPSAVSVRVAQIWFKLF*SGNFYVKDERRSGHPI 520
AI L R T+R N GP + R Q WFK F G+ ++DE RSG P
Sbjct: 340 AIFLFEFKMGRKAAETTRNINNAF--GPGTANERTVQWWFKKFCKGDESLEDEERSGRPS 397
Query: 521 TDKMDAIFEKVEQDRHVSSYDVAEQLGIDHKTVLAHLKKTGYTKKLDIWVPHELTERNLM 700
D + +E D ++ +VAE+L ++H TV+ HLK+ KKLD WVPHELTE
Sbjct: 398 EVDNDQLRAIIEADPLTTTREVAEELNVNHSTVVRHLKQIEKVKKLDKWVPHELTENQKN 457
Query: 701 NRVLICDFLLRRSETDPFL 757
R + L+ R+ +PFL
Sbjct: 458 RRFEVSSSLILRNHNEPFL 476
Score = 35.9 bits (79), Expect = 0.18
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 742 NRPIFEKLITGDEKWITYDKNVRKMSW 822
N P ++++T DEKWI YD R W
Sbjct: 472 NEPFLDRIVTCDEKWILYDNRRRSAQW 498
>U49974-1|AAC52011.1| 351|Homo sapiens mariner transposase protein.
Length = 351
Score = 42.3 bits (95), Expect = 0.002
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 5/118 (4%)
Frame = +2
Query: 413 VNGPSAVSVRVAQIWFKLF*SGNFYVKDERRSGHPIT----DKMDAIFEKVEQDRHVSSY 580
V G +A W F G V+DE RSG P T +K++ + +E+DR +++
Sbjct: 32 VYGDNAPKKSAVYKWITRFKKGRDDVEDEARSGRPSTSICEEKINLVRALIEEDRRLTAE 91
Query: 581 DVAEQLGIDHKTVLAHL-KKTGYTKKLDIWVPHELTERNLMNRVLICDFLLRRSETDP 751
+A I + L +K +K WVP L L R + +L + + DP
Sbjct: 92 TIANTTDISIGSAYTILTEKLKLSKLSTRWVPKPLRPDQLQTRAELSMEILNKWDQDP 149
>BC040665-1|AAH40665.1| 254|Homo sapiens LOC387790 protein protein.
Length = 254
Score = 41.9 bits (94), Expect = 0.003
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Frame = +2
Query: 455 WFKLF*SGNFYVKDERRSGHPITDKMDAIFEKVE----QDRHVSSYDVAEQLGIDHKTVL 622
W K F G V+D+ RSG P+T + D +KV+ +R ++ +AE+L +D +TV
Sbjct: 46 WHKRFKEGREDVRDDARSGRPVTHRTDDNIQKVKDLVCSNRQLTVRMMAEELNLDKETVR 105
Query: 623 AHLKKTGYTKKL 658
LK+ +K+
Sbjct: 106 LILKENLNMRKI 117
>AK095089-1|BAC04485.1| 210|Homo sapiens protein ( Homo sapiens
cDNA FLJ37770 fis, clone BRHIP2025448. ).
Length = 210
Score = 41.9 bits (94), Expect = 0.003
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Frame = +2
Query: 455 WFKLF*SGNFYVKDERRSGHPITDKMDAIFEKVE----QDRHVSSYDVAEQLGIDHKTVL 622
W K F G V+D+ RSG P+T + D +KV+ +R ++ +AE+L +D +TV
Sbjct: 46 WHKRFKEGREDVRDDARSGRPVTHRTDDNIQKVKDLVCSNRQLTVRMMAEELNLDKETVR 105
Query: 623 AHLKKTGYTKKL 658
LK+ +K+
Sbjct: 106 LILKENLNMRKI 117
>BC010017-1|AAH10017.1| 292|Homo sapiens Unknown (protein for
IMAGE:2819902) protein.
Length = 292
Score = 32.7 bits (71), Expect = 1.6
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +2
Query: 419 GPSAVSVRVAQIWFKLF*SGNFYVKDERRSGHPITDKMDAIFEKVEQDRHVSSYDVAEQL 598
GP + + Q WFK F + ++DE+ S P D + +E D ++ +VA++L
Sbjct: 212 GPGTANEHIVQWWFKKFCKEDKSLEDEKHSVWPSEVDNDQLKALIEADPVKTTQEVAQEL 271
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,072,692
Number of Sequences: 237096
Number of extensions: 2200178
Number of successful extensions: 3362
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3361
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10259383312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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