Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt18g22
(453 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 25 0.51
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 24 0.67
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 1.2
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 1.2
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 1.2
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 1.2
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 1.2
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 1.2
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 1.2
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 1.2
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 4.7
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 8.3
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 8.3
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 8.3
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 8.3
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 24.6 bits (51), Expect = 0.51
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 344 NHRYL*NNFNILSKFYCNVRFI 409
N+ Y NN+N K Y N+ +I
Sbjct: 103 NYNYNNNNYNNYKKLYYNINYI 124
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 0.67
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 344 NHRYL*NNFNILSKFYCNVRFI 409
N+ Y NN+N K Y N+ +I
Sbjct: 93 NNNYNNNNYNNYKKLYYNINYI 114
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 338 NFNHRYL*NNFNILSKFYCNVRFI 409
N+N+ NN+N K Y N+ +I
Sbjct: 93 NYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.4 bits (48), Expect = 1.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 338 NFNHRYL*NNFNILSKFYCNVRFI 409
N+N+ NN+N K Y N+ +I
Sbjct: 93 NYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 338 NFNHRYL*NNFNILSKFYCNVRFI 409
N+N+ NN+N K Y N+ +I
Sbjct: 93 NYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 338 NFNHRYL*NNFNILSKFYCNVRFI 409
N+N+ NN+N K Y N+ +I
Sbjct: 93 NYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 338 NFNHRYL*NNFNILSKFYCNVRFI 409
N+N+ NN+N K Y N+ +I
Sbjct: 93 NYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 338 NFNHRYL*NNFNILSKFYCNVRFI 409
N+N+ NN+N K Y N+ +I
Sbjct: 93 NYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 338 NFNHRYL*NNFNILSKFYCNVRFI 409
N+N+ NN+N K Y N+ +I
Sbjct: 93 NYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 338 NFNHRYL*NNFNILSKFYCNVRFI 409
N+N+ NN+N K Y N+ +I
Sbjct: 93 NYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 4.7
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +2
Query: 326 SFALNFNHRYL*NNFNILSKFY 391
++ N+N++Y NN N K Y
Sbjct: 95 NYKYNYNNKYNYNNNNYNKKLY 116
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 338 NFNHRYL*NNFNILSKFYCNVRFI 409
N+N+ Y N + +K Y N+ +I
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 338 NFNHRYL*NNFNILSKFYCNVRFI 409
N+N+ Y N + +K Y N+ +I
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 338 NFNHRYL*NNFNILSKFYCNVRFI 409
N+N+ Y N + +K Y N+ +I
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 338 NFNHRYL*NNFNILSKFYCNVRFI 409
N+N+ Y N + +K Y N+ +I
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 338 NFNHRYL*NNFNILSKFYCNVRFI 409
N+N+ Y N + +K Y N+ +I
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 338 NFNHRYL*NNFNILSKFYCNVRFI 409
N+N+ Y N + +K Y N+ +I
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 338 NFNHRYL*NNFNILSKFYCNVRFI 409
N+N+ Y N + +K Y N+ +I
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 338 NFNHRYL*NNFNILSKFYCNVRFI 409
N+N+ Y N + +K Y N+ +I
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 338 NFNHRYL*NNFNILSKFYCNVRFI 409
N+N+ Y N + +K Y N+ +I
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYI 116
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 338 NFNHRYL*NNFNILSKFYCNVRFI 409
N+N+ Y N + +K Y N+ +I
Sbjct: 326 NYNNNYNNYNKHNYNKLYYNINYI 349
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 338 NFNHRYL*NNFNILSKFYCNVRFI 409
N+N+ Y N + +K Y N+ +I
Sbjct: 326 NYNNNYNNYNKHNYNKLYYNINYI 349
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 20.6 bits (41), Expect = 8.3
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +2
Query: 26 NLSHQSQMYKSSVFSKSFKLELFSTSIVW 112
+L H Q S++ +K L F S+ W
Sbjct: 187 DLKHMKQEAGSNLVAKGIDLSDFYLSVEW 215
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,767
Number of Sequences: 438
Number of extensions: 2459
Number of successful extensions: 23
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11943513
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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