Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt18f14
(842 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 27 0.29
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 27 0.29
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 25 1.2
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 24 1.5
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 8.1
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 8.1
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 8.1
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 8.1
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 8.1
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 8.1
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 8.1
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 8.1
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 8.1
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 26.6 bits (56), Expect = 0.29
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 459 QSFFTVVKHYNIFTNNFNSPFVKLIDPNDSTSI 557
++F V K N+F NNFNS +K I N+ +
Sbjct: 518 KAFNNVPKKLNMFYNNFNSD-IKSISNNEQVKV 549
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 26.6 bits (56), Expect = 0.29
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 459 QSFFTVVKHYNIFTNNFNSPFVKLIDPNDSTSI 557
++F V K N+F NNFNS +K I N+ +
Sbjct: 518 KAFNNVPKKLNMFYNNFNSD-IKSISNNEQVKV 549
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 24.6 bits (51), Expect = 1.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -3
Query: 408 GDSCLWLKGQCEDSNIHVH 352
GD+C W+ QCE+ +VH
Sbjct: 463 GDTCCWVCDQCEEYE-YVH 480
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 24.2 bits (50), Expect = 1.5
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 408 GDSCLWLKGQCED 370
GD+C W+ QCE+
Sbjct: 553 GDTCCWVCDQCEE 565
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.1
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +3
Query: 483 HYNIFTNNFNSPFVKL 530
+YN + NN+N+ + KL
Sbjct: 93 NYNNYNNNYNTNYKKL 108
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.1
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +3
Query: 483 HYNIFTNNFNSPFVKL 530
+YN + NN+N+ + KL
Sbjct: 93 NYNNYNNNYNTNYKKL 108
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.1
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +3
Query: 483 HYNIFTNNFNSPFVKL 530
+YN + NN+N+ + KL
Sbjct: 93 NYNNYNNNYNTNYKKL 108
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.1
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +3
Query: 483 HYNIFTNNFNSPFVKL 530
+YN + NN+N+ + KL
Sbjct: 93 NYNNYNNNYNTNYKKL 108
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.1
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +3
Query: 483 HYNIFTNNFNSPFVKL 530
+YN + NN+N+ + KL
Sbjct: 93 NYNNYNNNYNTNYKKL 108
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.1
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +3
Query: 483 HYNIFTNNFNSPFVKL 530
+YN + NN+N+ + KL
Sbjct: 93 NYNNYNNNYNTNYKKL 108
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.1
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +3
Query: 483 HYNIFTNNFNSPFVKL 530
+YN + NN+N+ + KL
Sbjct: 97 NYNNYNNNYNTNYKKL 112
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.1
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +3
Query: 483 HYNIFTNNFNSPFVKL 530
+YN + NN+N+ + KL
Sbjct: 93 NYNNYNNNYNTNYKKL 108
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 8.1
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +3
Query: 483 HYNIFTNNFNSPFVKL 530
+YN + NN+N+ + KL
Sbjct: 336 NYNNYNNNYNNNYKKL 351
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,948
Number of Sequences: 438
Number of extensions: 5767
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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