Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt18f11
(808 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ006778-1|CAA07243.1| 2785|Homo sapiens DRIM protein protein. 34 0.53
AF174498-1|AAF36539.1| 1381|Homo sapiens GR AF-1 specific protei... 32 2.1
AB014514-1|BAA31589.3| 3006|Homo sapiens KIAA0614 protein protein. 32 2.1
Y08614-1|CAA69905.2| 1071|Homo sapiens CRM1 protein. 31 3.7
D89729-1|BAA23415.1| 1071|Homo sapiens CRM1 protein protein. 31 3.7
BC032847-1|AAH32847.1| 1071|Homo sapiens XPO1 protein protein. 31 3.7
AC016727-1|AAY14949.1| 1071|Homo sapiens unknown protein. 31 3.7
AC073275-1|AAQ93366.1| 111|Homo sapiens unknown protein. 31 6.5
L42572-1|AAA85336.1| 758|Homo sapiens transmembrane protein pro... 30 8.6
D21094-1|BAA04656.1| 758|Homo sapiens motor protein protein. 30 8.6
D21092-1|BAA04654.1| 721|Homo sapiens motor protein protein. 30 8.6
CR456793-1|CAG33074.1| 758|Homo sapiens IMMT protein. 30 8.6
BX537369-1|CAD97612.1| 747|Homo sapiens hypothetical protein pr... 30 8.6
BC002412-1|AAH02412.1| 758|Homo sapiens inner membrane protein,... 30 8.6
AY232292-1|AAP69987.1| 757|Homo sapiens proliferation-inducing ... 30 8.6
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 30 8.6
AF264781-1|AAG36936.1| 449|Homo sapiens DM4E3 protein. 30 8.6
>AJ006778-1|CAA07243.1| 2785|Homo sapiens DRIM protein protein.
Length = 2785
Score = 34.3 bits (75), Expect = 0.53
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = -3
Query: 587 QKMQESVTNAVENMSNRFTDS-GYGVRDCVTSHSNDVSALFHEAITKATSCVSDRLKEAN 411
+ ++++ T+A + + N TD G + DV AL+HE + T C +RL N
Sbjct: 761 EHLEKAATHAEKELQNDMTDEKSVGDESWEQTQEGDVGALYHEQLALKTDC-QERLDHTN 819
Query: 410 DQILGFTAI 384
+ L + A+
Sbjct: 820 FRFLLWRAL 828
>AF174498-1|AAF36539.1| 1381|Homo sapiens GR AF-1 specific protein
phosphatase protein.
Length = 1381
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = -3
Query: 287 SVALNAETKLVSFTAQSAITTARISLGIASLPASLEVCAATSLVEAGIATSRILMEIGGC 108
S++ +A T S + I+ L + LPA LE+ L+E +S+ ++I C
Sbjct: 445 SISASASTSQASICSSQGISQTVSDLSVDPLPAGLELPIPPGLLEPHAVSSQESLDISLC 504
Query: 107 SANSV 93
S S+
Sbjct: 505 STGSL 509
>AB014514-1|BAA31589.3| 3006|Homo sapiens KIAA0614 protein protein.
Length = 3006
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = -3
Query: 287 SVALNAETKLVSFTAQSAITTARISLGIASLPASLEVCAATSLVEAGIATSRILMEIGGC 108
S++ +A T S + I+ L + LPA LE+ L+E +S+ ++I C
Sbjct: 2070 SISASASTSQASICSSQGISQTVSDLSVDPLPAGLELPIPPGLLEPHAVSSQESLDISLC 2129
Query: 107 SANSV 93
S S+
Sbjct: 2130 STGSL 2134
>Y08614-1|CAA69905.2| 1071|Homo sapiens CRM1 protein.
Length = 1071
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = -1
Query: 766 ILQFSDSVNLTYMG--ILGN*LKTSWKICRKQQ 674
IL+FS ++N Y G IL N +KT WKI + Q
Sbjct: 66 ILEFSQNMNTKYYGLQILENVIKTRWKILPRNQ 98
>D89729-1|BAA23415.1| 1071|Homo sapiens CRM1 protein protein.
Length = 1071
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = -1
Query: 766 ILQFSDSVNLTYMG--ILGN*LKTSWKICRKQQ 674
IL+FS ++N Y G IL N +KT WKI + Q
Sbjct: 66 ILEFSQNMNTKYYGLQILENVIKTRWKILPRNQ 98
>BC032847-1|AAH32847.1| 1071|Homo sapiens XPO1 protein protein.
Length = 1071
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = -1
Query: 766 ILQFSDSVNLTYMG--ILGN*LKTSWKICRKQQ 674
IL+FS ++N Y G IL N +KT WKI + Q
Sbjct: 66 ILEFSQNMNTKYYGLQILENVIKTRWKILPRNQ 98
>AC016727-1|AAY14949.1| 1071|Homo sapiens unknown protein.
Length = 1071
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = -1
Query: 766 ILQFSDSVNLTYMG--ILGN*LKTSWKICRKQQ 674
IL+FS ++N Y G IL N +KT WKI + Q
Sbjct: 66 ILEFSQNMNTKYYGLQILENVIKTRWKILPRNQ 98
>AC073275-1|AAQ93366.1| 111|Homo sapiens unknown protein.
Length = 111
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +3
Query: 447 CFCYCLVKQGTNVVT--VRCYTIPNTISRI-CKSIRHIFYSVCDAFLHFLYIV 596
C C + K+ T + ++C +PNT + I +F +CD F HF++ +
Sbjct: 39 CVCIYIYKRKTYIYFNYLKCKNLPNTNGKSDVYYIILLFVHLCDLFTHFMFFI 91
>L42572-1|AAA85336.1| 758|Homo sapiens transmembrane protein
protein.
Length = 758
Score = 30.3 bits (65), Expect = 8.6
Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 1/107 (0%)
Frame = -3
Query: 716 KLIEDFVENLQKATDEARDAINGFTSGLQDEAKQIRDKISNDIQKMQESVTNAVENMSNR 537
+ +E ++ +KA DEA DA+ L+ I + ++ + +T A + N
Sbjct: 275 RTVEGALKERRKAVDEAADALLKAKEELEKMKSVIENAKKKEVAGAKPHITAAEGKLHNM 334
Query: 536 FTDSGYGVRDCVTSHSN-DVSALFHEAITKATSCVSDRLKEANDQIL 399
D V+ + S V + +HE + +A L ++L
Sbjct: 335 IVDLDNVVKKVQAAQSEAKVVSQYHELVVQARDDFKRELDSITPEVL 381
>D21094-1|BAA04656.1| 758|Homo sapiens motor protein protein.
Length = 758
Score = 30.3 bits (65), Expect = 8.6
Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 1/107 (0%)
Frame = -3
Query: 716 KLIEDFVENLQKATDEARDAINGFTSGLQDEAKQIRDKISNDIQKMQESVTNAVENMSNR 537
+ +E ++ +KA DEA DA+ L+ I + ++ + +T A + N
Sbjct: 275 RTVEGALKERRKAVDEAADALLKAKEELEKMKSVIENAKKKEVAGAKPHITAAEGKLHNM 334
Query: 536 FTDSGYGVRDCVTSHSN-DVSALFHEAITKATSCVSDRLKEANDQIL 399
D V+ + S V + +HE + +A L ++L
Sbjct: 335 IVDLDNVVKKVQAAQSEAKVVSQYHELVVQARDDFKRELDSITPEVL 381
>D21092-1|BAA04654.1| 721|Homo sapiens motor protein protein.
Length = 721
Score = 30.3 bits (65), Expect = 8.6
Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 1/107 (0%)
Frame = -3
Query: 716 KLIEDFVENLQKATDEARDAINGFTSGLQDEAKQIRDKISNDIQKMQESVTNAVENMSNR 537
+ +E ++ +KA DEA DA+ L+ I + ++ + +T A + N
Sbjct: 238 RTVEGALKERRKAVDEAADALLKAKEELEKMKSVIENAKKKEVAGAKPHITAAEGKLHNM 297
Query: 536 FTDSGYGVRDCVTSHSN-DVSALFHEAITKATSCVSDRLKEANDQIL 399
D V+ + S V + +HE + +A L ++L
Sbjct: 298 IVDLDNVVKKVQAAQSEAKVVSQYHELVVQARDDFKRELDSITPEVL 344
>CR456793-1|CAG33074.1| 758|Homo sapiens IMMT protein.
Length = 758
Score = 30.3 bits (65), Expect = 8.6
Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 1/107 (0%)
Frame = -3
Query: 716 KLIEDFVENLQKATDEARDAINGFTSGLQDEAKQIRDKISNDIQKMQESVTNAVENMSNR 537
+ +E ++ +KA DEA DA+ L+ I + ++ + +T A + N
Sbjct: 275 RTVEGALKERRKAVDEAADALLKAKEELEKMKSVIENAKKKEVAGAKPHITAAEGKLHNM 334
Query: 536 FTDSGYGVRDCVTSHSN-DVSALFHEAITKATSCVSDRLKEANDQIL 399
D V+ + S V + +HE + +A L ++L
Sbjct: 335 IVDLDNVVKKVQAAQSEAKVVSQYHELVVQARDDFKRELDSITPEVL 381
>BX537369-1|CAD97612.1| 747|Homo sapiens hypothetical protein
protein.
Length = 747
Score = 30.3 bits (65), Expect = 8.6
Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 1/107 (0%)
Frame = -3
Query: 716 KLIEDFVENLQKATDEARDAINGFTSGLQDEAKQIRDKISNDIQKMQESVTNAVENMSNR 537
+ +E ++ +KA DEA DA+ L+ I + ++ + +T A + N
Sbjct: 264 RTVEGALKERRKAVDEAADALLKAKEELEKMKSVIENAKKKEVAGAKPHITAAEGKLHNM 323
Query: 536 FTDSGYGVRDCVTSHSN-DVSALFHEAITKATSCVSDRLKEANDQIL 399
D V+ + S V + +HE + +A L ++L
Sbjct: 324 IVDLDNVVKKVQAAQSEAKVVSQYHELVVQARDDFKRELDSITPEVL 370
>BC002412-1|AAH02412.1| 758|Homo sapiens inner membrane protein,
mitochondrial (mitofilin) protein.
Length = 758
Score = 30.3 bits (65), Expect = 8.6
Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 1/107 (0%)
Frame = -3
Query: 716 KLIEDFVENLQKATDEARDAINGFTSGLQDEAKQIRDKISNDIQKMQESVTNAVENMSNR 537
+ +E ++ +KA DEA DA+ L+ I + ++ + +T A + N
Sbjct: 275 RTVEGALKERRKAVDEAADALLKAKEELEKMKSVIENAKKKEVAGAKPHITAAEGKLHNM 334
Query: 536 FTDSGYGVRDCVTSHSN-DVSALFHEAITKATSCVSDRLKEANDQIL 399
D V+ + S V + +HE + +A L ++L
Sbjct: 335 IVDLDNVVKKVQAAQSEAKVVSQYHELVVQARDDFKRELDSITPEVL 381
>AY232292-1|AAP69987.1| 757|Homo sapiens proliferation-inducing
gene 4 protein.
Length = 757
Score = 30.3 bits (65), Expect = 8.6
Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 1/107 (0%)
Frame = -3
Query: 716 KLIEDFVENLQKATDEARDAINGFTSGLQDEAKQIRDKISNDIQKMQESVTNAVENMSNR 537
+ +E ++ +KA DEA DA+ L+ I + ++ + +T A + N
Sbjct: 274 RTVEGALKERRKAVDEAADALLKAKEELEKMKSVIENAKKKEVAGAKPHITAAEGKLHNM 333
Query: 536 FTDSGYGVRDCVTSHSN-DVSALFHEAITKATSCVSDRLKEANDQIL 399
D V+ + S V + +HE + +A L ++L
Sbjct: 334 IVDLDNVVKKVQAAQSEAKVVSQYHELVVQARDDFKRELDSITPEVL 380
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 30.3 bits (65), Expect = 8.6
Identities = 38/161 (23%), Positives = 66/161 (40%)
Frame = -3
Query: 566 TNAVENMSNRFTDSGYGVRDCVTSHSNDVSALFHEAITKATSCVSDRLKEANDQILGFTA 387
T A+E M + + V + H + S L TKAT+ + +G T
Sbjct: 6876 TTAIEAMHPSTSTAATNVETTCSGHGSQSSVLTDSEKTKATAPMD------TTSTMGHTT 6929
Query: 386 IVNNAVQSSSKALDDMRKCTQEGSFLTTGSCLGSVALNAETKLVSFTAQSAITTARISLG 207
V+ ++ SS+ R+ T LT G S++ NA SF+ ++I + + G
Sbjct: 6930 -VSTSMSVSSETTKIKRESTYS---LTPGLRETSISQNA-----SFSTDTSIVLSEVPTG 6980
Query: 206 IASLPASLEVCAATSLVEAGIATSRILMEIGGCSANSVFTS 84
+ + EV ++ G + S +L EI + +F S
Sbjct: 6981 TTAEVSRTEVTSSGRTSIPGPSQSTVLPEISTRTMTRLFAS 7021
>AF264781-1|AAG36936.1| 449|Homo sapiens DM4E3 protein.
Length = 449
Score = 30.3 bits (65), Expect = 8.6
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = -3
Query: 308 TTGSCLGSVALNAETKLVSFTAQSAITTARISLGIASLPASLEVCAATSLVEAGIATSRI 129
T+G V A T + S T ++ITTA S+ +AS S AA+S A IA +
Sbjct: 94 TSGGAADGVTSIAPTAVASSTTAASITTAASSMTVAS---SAPTTAASSTTVASIAPTTA 150
Query: 128 LMEIGGCSANSVFTSL 81
+ S+ + +L
Sbjct: 151 ASSMTAASSTPMTLAL 166
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,523,638
Number of Sequences: 237096
Number of extensions: 2265891
Number of successful extensions: 5906
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5906
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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