Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt18f06
(826 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 23 2.6
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 23 2.6
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 23 2.6
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 23 2.6
DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2 pr... 23 3.4
DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1 pr... 23 3.4
AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-ri... 23 3.4
AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein. 23 3.4
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 4.5
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 7.9
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 7.9
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 7.9
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 7.9
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 7.9
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 7.9
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 2.6
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = -1
Query: 157 NKYKHHEMKNIRIKSSSEKN--QMSYYNYNY 71
N YK+ N + + N ++ YYN NY
Sbjct: 87 NNYKYSNYNNYNNNNYNNNNYKKLQYYNINY 117
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 2.6
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = -1
Query: 157 NKYKHHEMKNIRIKSSSEKN--QMSYYNYNY 71
N YK+ N + + N ++ YYN NY
Sbjct: 87 NNYKYSNYNNYNNNNYNNNNYKKLQYYNINY 117
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 2.6
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = -1
Query: 157 NKYKHHEMKNIRIKSSSEKN--QMSYYNYNY 71
N YK+ N + + N ++ YYN NY
Sbjct: 87 NNYKYSNYNNYNNNNYNNNNYKKLQYYNINY 117
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 2.6
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = -1
Query: 157 NKYKHHEMKNIRIKSSSEKN--QMSYYNYNY 71
N YK+ N + + N ++ YYN NY
Sbjct: 87 NNYKYSNYNNYNNNNYNNNNYKKLQYYNINY 117
>DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2
precursor protein.
Length = 175
Score = 23.0 bits (47), Expect = 3.4
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 312 WNWWEILRPN 341
WNW +LRPN
Sbjct: 26 WNWNTLLRPN 35
>DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1
precursor protein.
Length = 223
Score = 23.0 bits (47), Expect = 3.4
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 312 WNWWEILRPN 341
WNW +LRPN
Sbjct: 70 WNWNTLLRPN 79
>AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-rich
protein precursor protein.
Length = 223
Score = 23.0 bits (47), Expect = 3.4
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 312 WNWWEILRPN 341
WNW +LRPN
Sbjct: 70 WNWNTLLRPN 79
>AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein.
Length = 223
Score = 23.0 bits (47), Expect = 3.4
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 312 WNWWEILRPN 341
WNW +LRPN
Sbjct: 70 WNWNTLLRPN 79
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 4.5
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +1
Query: 70 NNYNCNNSFGSFLN 111
NNYN NN++ ++ N
Sbjct: 90 NNYNYNNNYNNYNN 103
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 7.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 124 RIKSSSEKNQMSYYNYNYSVSLQN**CSFHLYSEINYL 11
+I SS N + NY Y+ + N + LY INY+
Sbjct: 80 KIISSLSNNTIHNNNYKYNYNNNN--YNKKLYYNINYI 115
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 7.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 124 RIKSSSEKNQMSYYNYNYSVSLQN**CSFHLYSEINYL 11
+I SS N + NY Y+ + N + LY INY+
Sbjct: 80 KIISSLSNNTIHNNNYKYNYNNNN--YNKKLYYNINYI 115
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 7.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 124 RIKSSSEKNQMSYYNYNYSVSLQN**CSFHLYSEINYL 11
+I SS N + NY Y+ + N + LY INY+
Sbjct: 80 KIISSLSNNTIHNNNYKYNYNNNN--YNKKLYYNINYI 115
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 7.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 124 RIKSSSEKNQMSYYNYNYSVSLQN**CSFHLYSEINYL 11
+I SS N + NY Y+ + N + LY INY+
Sbjct: 80 KIISSLSNNTIHNNNYKYNYNNNN--YNKKLYYNINYI 115
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.8 bits (44), Expect = 7.9
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = -3
Query: 476 IGKKLVELGFAKASFPK--ELK-KNTIESQIAPALLSAEAQAKSLRNGIWSEN 327
IG L + F P E+K KN + PA+L EAQ + +W+ N
Sbjct: 761 IGAGLSAVIFISVQAPPHFEIKLKNQTARRGEPAVLQCEAQGEKPIGILWNMN 813
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 7.9
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = -1
Query: 157 NKYKHHEMKNIRIKSSSEKNQMSYYNYNY 71
N YK+ N ++ N + YN NY
Sbjct: 320 NNYKYSNYNNYNNNYNNYNNYNNNYNNNY 348
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,325
Number of Sequences: 438
Number of extensions: 5462
Number of successful extensions: 61
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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