Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt18e21
(857 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical ... 59 5e-09
AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical ... 59 5e-09
AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical ... 58 1e-08
Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical pr... 56 2e-08
U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical pr... 52 4e-07
AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical ... 51 1e-06
U28735-4|AAF99953.1| 488|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical ... 50 2e-06
Z66522-7|CAA91409.2| 472|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z66520-13|CAA91392.2| 472|Caenorhabditis elegans Hypothetical p... 50 2e-06
Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical pr... 50 3e-06
Z70683-6|CAA94591.2| 512|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z73899-7|CAA98077.1| 492|Caenorhabditis elegans Hypothetical pr... 40 0.003
AL110487-4|CAB54427.1| 505|Caenorhabditis elegans Hypothetical ... 39 0.004
Z79602-1|CAB01888.3| 508|Caenorhabditis elegans Hypothetical pr... 36 0.028
AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical ... 36 0.028
Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical p... 35 0.085
Z83113-3|CAB05545.1| 479|Caenorhabditis elegans Hypothetical pr... 35 0.085
Z82288-7|CAB05326.1| 390|Caenorhabditis elegans Hypothetical pr... 34 0.15
AL161712-10|CAC35900.1| 533|Caenorhabditis elegans Hypothetical... 33 0.34
Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical pr... 31 0.79
Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical pr... 31 0.79
AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical ... 31 0.79
AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical ... 31 0.79
U40952-1|AAK68681.3| 436|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81587-3|CAB04700.1| 362|Caenorhabditis elegans Hypothetical pr... 30 2.4
AC090999-20|AAP46262.1| 132|Caenorhabditis elegans Hypothetical... 29 3.2
AC090999-19|AAK26156.1| 575|Caenorhabditis elegans Hypothetical... 29 3.2
Z83217-7|CAL69737.1| 223|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z77652-11|CAI70405.1| 310|Caenorhabditis elegans Hypothetical p... 28 9.8
>AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical
protein H17B01.1b protein.
Length = 510
Score = 58.8 bits (136), Expect = 5e-09
Identities = 42/165 (25%), Positives = 89/165 (53%), Gaps = 4/165 (2%)
Frame = -3
Query: 705 VTVDAQRIIMNAAAIYFMT--KFRRRVILIS-TTMLCVAVLLLISAYSYAKTSNLLPFDH 535
+ + A +IM +++ + KF RR +L++ T + V+ LLL+ A + + +
Sbjct: 346 IGMGAVNVIMTLISVWLVDHPKFGRRSLLLAGLTGMFVSTLLLVGALTIQNSGGDKWASY 405
Query: 534 PSIGAILLHVHMFTIATGSVPLPMTISGEIFPLQFRSVSGALSA-VFFSFHLFITVKTYR 358
+IG +LL V F ATG +P EIF R + +++ V ++ +L + + T+
Sbjct: 406 SAIGFVLLFVISF--ATGPGAIPWFFVSEIFDSSARGNANSIAVMVNWAANLLVGL-TFL 462
Query: 357 YLRNSLGLHGTYLIYAAIVTYCLVVSWIFLPETKDRTLQEIEDEF 223
+ N + + ++ I++ + + + +W F+PETK +++++I+ EF
Sbjct: 463 PINNLMQQY-SFFIFSGFLAFFIFYTWKFVPETKGKSIEQIQAEF 506
>AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical
protein H17B01.1a protein.
Length = 492
Score = 58.8 bits (136), Expect = 5e-09
Identities = 42/165 (25%), Positives = 89/165 (53%), Gaps = 4/165 (2%)
Frame = -3
Query: 705 VTVDAQRIIMNAAAIYFMT--KFRRRVILIS-TTMLCVAVLLLISAYSYAKTSNLLPFDH 535
+ + A +IM +++ + KF RR +L++ T + V+ LLL+ A + + +
Sbjct: 328 IGMGAVNVIMTLISVWLVDHPKFGRRSLLLAGLTGMFVSTLLLVGALTIQNSGGDKWASY 387
Query: 534 PSIGAILLHVHMFTIATGSVPLPMTISGEIFPLQFRSVSGALSA-VFFSFHLFITVKTYR 358
+IG +LL V F ATG +P EIF R + +++ V ++ +L + + T+
Sbjct: 388 SAIGFVLLFVISF--ATGPGAIPWFFVSEIFDSSARGNANSIAVMVNWAANLLVGL-TFL 444
Query: 357 YLRNSLGLHGTYLIYAAIVTYCLVVSWIFLPETKDRTLQEIEDEF 223
+ N + + ++ I++ + + + +W F+PETK +++++I+ EF
Sbjct: 445 PINNLMQQY-SFFIFSGFLAFFIFYTWKFVPETKGKSIEQIQAEF 488
>AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical
protein Y51A2D.4 protein.
Length = 606
Score = 57.6 bits (133), Expect = 1e-08
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Frame = -3
Query: 507 VHMFTIATGSVPLPMTISGEIFPLQFRSVSGALSAVF-FSFHLFITVKTYRYLRNSLGLH 331
V++ T ++G LP ++ E +P+ RS A+S + F+L I + TY L +G +
Sbjct: 473 VYLLTFSSGFTSLPWVLNSEFYPMWARSTCVAISTTSNWVFNLIIAL-TYLSLTQVIGKY 531
Query: 330 GTYLIYAAIVTYCLVVSWIFLPETKDRTLQEIEDEFRGGPPTRDRDENTAEILME 166
G + +YA + + +PETK +++E+E F R+ + E + E
Sbjct: 532 GAFWLYAGLTVIAFIFILFLVPETKGYSIEEVEMLFMNKKQRREAESRRRETVTE 586
>Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical
protein M01F1.5 protein.
Length = 604
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/97 (29%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Frame = -3
Query: 519 ILLHVHMFTIATGSVPLPMTISGEIFPLQFRSVSGALS-AVFFSFHLFITVKTYRYLRNS 343
I++ ++ + + G PLP ++ E +PL RS + ++S A + F+L +++ T+ L +
Sbjct: 473 IIMVFYLLSFSAGYAPLPWVLNAEFYPLWARSTAVSVSTACNWIFNLIVSL-TFLSLSQA 531
Query: 342 LGLHGTYLIYAAIVTYCLVVSWIFLPETKDRTLQEIE 232
+GT+ IY LV + F+PETK ++ E+E
Sbjct: 532 ATKYGTFFIYCGCTMVALVFVFFFVPETKGYSIDEVE 568
>U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical
protein F53H8.3 protein.
Length = 569
Score = 52.4 bits (120), Expect = 4e-07
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 1/146 (0%)
Frame = -3
Query: 660 YFMTKFRRRVILISTTMLCVAVLLLISAYSYAKTSNLLPFDHPSIGAIL-LHVHMFTIAT 484
+ + K RR + + C+ L+L+S +++ + N + G I L +M
Sbjct: 380 FLIHKVGRRWLSLFQLASCMVALMLLSLFTFLQ--NYENIEWARYGTIFSLVFYMCVYGV 437
Query: 483 GSVPLPMTISGEIFPLQFRSVSGALSAVFFSFHLFITVKTYRYLRNSLGLHGTYLIYAAI 304
GS P+P I+ E+F QFR+ + +S FI +Y + +G+ +Y +
Sbjct: 438 GS-PIPWIIASELFTQQFRATAVTVSVFVAWTFAFIVSTSYLPFQQLVGITFSYFPFIIG 496
Query: 303 VTYCLVVSWIFLPETKDRTLQEIEDE 226
+ + ++ LPET+DR + EI E
Sbjct: 497 LAVFGIFIYVLLPETRDRPMVEIVTE 522
>AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical
protein Y51A2D.5 protein.
Length = 613
Score = 50.8 bits (116), Expect = 1e-06
Identities = 34/140 (24%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Frame = -3
Query: 633 VILISTTMLCVAVL-----LLISAYSYAKTSNLLPFDHPSIGAILLHVHMFTIATGSVPL 469
V L S+T LC L +A SY + + + +++ V++ T + G L
Sbjct: 434 VTLYSSTGLCTNGLDKSNSSFPNATSYVWQKHHCTTSYTILPIVMMGVYLLTFSCGFTSL 493
Query: 468 PMTISGEIFPLQFRSVSGALSAVF-FSFHLFITVKTYRYLRNSLGLHGTYLIYAAIVTYC 292
P ++ E +P+ RS ++S + + F+L I + TY L +++ +G + +YA
Sbjct: 494 PWVLNSEFYPMWARSTCVSISTLSNWVFNLIIAL-TYLSLTHAITKYGAFWLYAIFTIIA 552
Query: 291 LVVSWIFLPETKDRTLQEIE 232
+ + +PET ++ E+E
Sbjct: 553 FIFIYFLVPETTGYSIDEVE 572
>U28735-4|AAF99953.1| 488|Caenorhabditis elegans Hypothetical
protein F48E3.2 protein.
Length = 488
Score = 50.4 bits (115), Expect = 2e-06
Identities = 36/149 (24%), Positives = 76/149 (51%), Gaps = 1/149 (0%)
Frame = -3
Query: 663 IYFMTKFRRRVILISTTMLCVAVLLLISAYSYAKTSNLLPFDHPSIGAILLHVHMFTIAT 484
++ + K+ R+ +LI T + +A +L+ S S + + I ++LH +++A
Sbjct: 321 MFIVEKYSRKWLLIGTASVNIAAILVFSL-SAILSHYWTWIGYGCIICLILHGISYSVAM 379
Query: 483 GSVPLPMTISGEIFPLQFRSVSGALS-AVFFSFHLFITVKTYRYLRNSLGLHGTYLIYAA 307
G P+ I+ E+ P+ FR+ S +L A+ + L + T+ L ++G + +
Sbjct: 380 G--PIAWFITSELVPINFRAASQSLVLALNHTVALVLAFLTFP-LYKTIGPITLVIFFVI 436
Query: 306 IVTYCLVVSWIFLPETKDRTLQEIEDEFR 220
C+++ ++LPETKD+ + I ++ R
Sbjct: 437 PGILCIIMLILYLPETKDKHINVIVEQLR 465
>AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical
protein C35A11.4 protein.
Length = 515
Score = 50.4 bits (115), Expect = 2e-06
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 4/157 (2%)
Frame = -3
Query: 669 AAIYFMTKFRRRVILISTTMLCVAVLLLISAYSYAKTSNLLPFDHPSIGAILLH---VHM 499
AA+ RR ++LIS + V L++ +A F++ +G IL+ +
Sbjct: 323 AAVIVDRNGRRPLLLISFAGILVCNLII-----FALMFTFYKFENHVLGFILICFICIFT 377
Query: 498 FTIATGSVPLPMTISGEIFPLQFRSVSGALSAVFFSFHLFITVKTYRYLRNSLGLHGTYL 319
F A G PL I+ E+ RS + + ++V F+ V + ++N LG +YL
Sbjct: 378 FFFALGPGPLCYFINAELVGQAARSAAQSWASVIQMLSRFVIVTAFLPMKNQLGEAWSYL 437
Query: 318 I-YAAIVTYCLVVSWIFLPETKDRTLQEIEDEFRGGP 211
I + A V LV + LPETK++ E+E+ P
Sbjct: 438 ILFVAPVAASLVYLYFSLPETKNKNPFEVEEAIEDLP 474
>Z66522-7|CAA91409.2| 472|Caenorhabditis elegans Hypothetical
protein F14E5.1 protein.
Length = 472
Score = 50.0 bits (114), Expect = 2e-06
Identities = 35/142 (24%), Positives = 77/142 (54%), Gaps = 1/142 (0%)
Frame = -3
Query: 642 RRRVILISTTMLCVAVLLLISAYSYAKTSNLL-PFDHPSIGAILLHVHMFTIATGSVPLP 466
RR+++L+ T + +A LI+ +AK L+ P + + A++ ++ +T TG P+
Sbjct: 334 RRKLLLLFTFLNNLA---LIAFVFFAKIRILIDPMKYGCLVALI--IYGYTYGTGVGPIS 388
Query: 465 MTISGEIFPLQFRSVSGALSAVFFSFHLFITVKTYRYLRNSLGLHGTYLIYAAIVTYCLV 286
IS E+ P + RS++ +++ + + I+ T L + +G + ++Y+ ++
Sbjct: 389 WFISSELVPQKHRSIAQSVAYSMNTVMVVISTFTVLPLYSVIGSYAFLILYSIPSFISML 448
Query: 285 VSWIFLPETKDRTLQEIEDEFR 220
+ + +LPETK R + +I +E +
Sbjct: 449 ILFRYLPETKGREIHDIVNELK 470
>Z66520-13|CAA91392.2| 472|Caenorhabditis elegans Hypothetical
protein F14E5.1 protein.
Length = 472
Score = 50.0 bits (114), Expect = 2e-06
Identities = 35/142 (24%), Positives = 77/142 (54%), Gaps = 1/142 (0%)
Frame = -3
Query: 642 RRRVILISTTMLCVAVLLLISAYSYAKTSNLL-PFDHPSIGAILLHVHMFTIATGSVPLP 466
RR+++L+ T + +A LI+ +AK L+ P + + A++ ++ +T TG P+
Sbjct: 334 RRKLLLLFTFLNNLA---LIAFVFFAKIRILIDPMKYGCLVALI--IYGYTYGTGVGPIS 388
Query: 465 MTISGEIFPLQFRSVSGALSAVFFSFHLFITVKTYRYLRNSLGLHGTYLIYAAIVTYCLV 286
IS E+ P + RS++ +++ + + I+ T L + +G + ++Y+ ++
Sbjct: 389 WFISSELVPQKHRSIAQSVAYSMNTVMVVISTFTVLPLYSVIGSYAFLILYSIPSFISML 448
Query: 285 VSWIFLPETKDRTLQEIEDEFR 220
+ + +LPETK R + +I +E +
Sbjct: 449 ILFRYLPETKGREIHDIVNELK 470
>Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical
protein K08F9.1 protein.
Length = 490
Score = 49.6 bits (113), Expect = 3e-06
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 4/156 (2%)
Frame = -3
Query: 684 IIMNAAAIYFMTKFRRRVILISTTMLCVAVLLLISAYSYAKTSNLLPFDHPSIGAILLH- 508
+I + AI + K RR +L+ + +A +L+ + + F + +G IL+
Sbjct: 317 VISSVLAIAIIDKNGRRPLLL----ISLAGILICNLIIFGLMFTFDKFGNQVLGFILIFF 372
Query: 507 --VHMFTIATGSVPLPMTISGEIFPLQFRSVSGALSAVFFSFHLFITVKTYRYLRNSLGL 334
+ F A G PL I+ E+ RS + + ++V F + + ++N LG
Sbjct: 373 ICIFQFFFALGPGPLSYFINAELVGQDARSAAQSWASVVQMISQFSIITAFLPMKNQLGE 432
Query: 333 HGTYLI-YAAIVTYCLVVSWIFLPETKDRTLQEIED 229
+YLI + A V LV + LPETK+++ E+E+
Sbjct: 433 AWSYLILFVAPVAVSLVFLYFSLPETKNKSPIEVEE 468
>Z70683-6|CAA94591.2| 512|Caenorhabditis elegans Hypothetical
protein F13B12.2 protein.
Length = 512
Score = 39.9 bits (89), Expect = 0.002
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 3/181 (1%)
Frame = -3
Query: 789 GSISFPPYIVEVAEALVDKDKMNVPLLVVTVDAQRIIMNAAAIYFMTKFRRRVILISTTM 610
GS+ Y E+ EA+ D + VP L I++ A+ ++ RR +L+ T M
Sbjct: 304 GSMVTISYSTEMFEAVSFIDIL-VPFLPALGSILSILLTIPALRWVETRGRRPLLLKTLM 362
Query: 609 LCVA--VLLLISAYSYAKTSNLLPFDHPSIGAILLHVHMFTIATGSVPLPMTISGEIFPL 436
C+ V LLI + +S + + A ++ + + G P+ + E+ P
Sbjct: 363 FCIIANVFLLIFTLISSDSSGWASWGFAA--AFFMYGIGYNLGVG--PVAYFLPAELVPP 418
Query: 435 QFRSVSGALSAVFFSFHLFITVKTYRY-LRNSLGLHGTYLIYAAIVTYCLVVSWIFLPET 259
+ S S +AV ++ IT + Y L ++G +YLI+ + ++ W LPET
Sbjct: 419 EAASASLG-AAVAVNWICTITTTLFYYPLSKTVG-GWSYLIFIIPTSIFSMILWRLLPET 476
Query: 258 K 256
K
Sbjct: 477 K 477
>Z73899-7|CAA98077.1| 492|Caenorhabditis elegans Hypothetical
protein ZK829.9 protein.
Length = 492
Score = 39.5 bits (88), Expect = 0.003
Identities = 40/155 (25%), Positives = 66/155 (42%)
Frame = -3
Query: 681 IMNAAAIYFMTKFRRRVILISTTMLCVAVLLLISAYSYAKTSNLLPFDHPSIGAILLHVH 502
I + + + K RR++L+ T C + L I A S + ++GA +
Sbjct: 330 ISSICSTLIIDKLPRRILLL-TCGSCTVLFLTIFAVSEQMHQKSI-----AMGACFGFIM 383
Query: 501 MFTIATGSVPLPMTISGEIFPLQFRSVSGALSAVFFSFHLFITVKTYRYLRNSLGLHGTY 322
+ I G P+ +I E+ PL RS+ L S + +T L S+G
Sbjct: 384 SYGIGVG--PVIWSIPPELSPLADRSMMFCLVYSIHSCLVVVTNFATIPLFMSIGAFSFV 441
Query: 321 LIYAAIVTYCLVVSWIFLPETKDRTLQEIEDEFRG 217
L++A + LV + LPET R + I +E +G
Sbjct: 442 LLFAIPSAFALVYLLVCLPETSGREIHVIINELKG 476
>AL110487-4|CAB54427.1| 505|Caenorhabditis elegans Hypothetical
protein Y39E4B.5 protein.
Length = 505
Score = 39.1 bits (87), Expect = 0.004
Identities = 40/194 (20%), Positives = 88/194 (45%), Gaps = 7/194 (3%)
Frame = -3
Query: 786 SISFPPYIVEVAEALVDKDKMNVPLLVVTVDAQRIIMNAAAIY---FMTKFRRRVILIST 616
++SF P + L++ ++V + + ++++ ++I + +F RR +LI+
Sbjct: 277 TLSFYPILQSSTYFLLESG-VSVDMAQICSTMAQVVLTLSSICGASIIDRFSRRKLLITF 335
Query: 615 TMLCVAVLLLISAYSYAKTSNLLPFDHPSIGAILLHVHMFTIATGSV--PLPMTISGEIF 442
+L +L+ S +S+ + + P+ P A L + + I+ G V PL ++ E+
Sbjct: 336 GILSNVLLVAFSFFSHLSATVVSPYSWPKY-ACLASLLAYCISFGMVLGPLSWFVAPELV 394
Query: 441 PLQFRSVSGALSAVFFSFHLFITVKTYRYLRNSLGLHGTYLIYAAIVT--YCLVVSWIFL 268
+ R SA F +L I + + + ++ +V +CL ++F+
Sbjct: 395 SQRHRCT--IFSACFAIHNLLIALTDFATIPLFRIFGSMCFVFLFVVPSFFCLCYIYLFM 452
Query: 267 PETKDRTLQEIEDE 226
PET ++ +I E
Sbjct: 453 PETLGKSTLDIIHE 466
>Z79602-1|CAB01888.3| 508|Caenorhabditis elegans Hypothetical
protein K09E9.1 protein.
Length = 508
Score = 36.3 bits (80), Expect = 0.028
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 4/149 (2%)
Frame = -3
Query: 660 YFMTKF-RRRVILISTTMLCVAVLLLISAYSYAKTSNLLPFDHPSIGAILLHVHMFTIAT 484
+F+ +F +R I IS+ LC L+I Y +D + +++ + + IA
Sbjct: 371 FFLNRFLTKRAIAISSVGLCCLAALMILPIQY--------YDIQCMRWVIIMLSLM-IAA 421
Query: 483 GSVP---LPMTISGEIFPLQFRSVSGALSAVFFSFHLFITVKTYRYLRNSLGLHGTYLIY 313
G P + S E+FP RS++ + + YLR + G I+
Sbjct: 422 GIDPTWKINHLYSAELFPTSVRSMARGVCNAGGRLGS-VMAPMIVYLR-TFGFFIPNAIF 479
Query: 312 AAIVTYCLVVSWIFLPETKDRTLQEIEDE 226
A ++ LVV IFLP+ D+ E+ DE
Sbjct: 480 AVLLFIQLVVIVIFLPDDSDKDANEMNDE 508
>AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical
protein R09B5.11 protein.
Length = 516
Score = 36.3 bits (80), Expect = 0.028
Identities = 28/139 (20%), Positives = 62/139 (44%)
Frame = -3
Query: 642 RRRVILISTTMLCVAVLLLISAYSYAKTSNLLPFDHPSIGAILLHVHMFTIATGSVPLPM 463
R+R+ + + +C++ +L++ + SN + + + + T A G P+P
Sbjct: 372 RKRLHIAGLSGMCISSILIVITLTL---SNAGYHWASYMNVLFILSFVVTFAFGPGPIPW 428
Query: 462 TISGEIFPLQFRSVSGALSAVFFSFHLFITVKTYRYLRNSLGLHGTYLIYAAIVTYCLVV 283
+ E+F R + A+SA ++ T+ + N + + +L++ +
Sbjct: 429 FFTSELFDSATRGRAAAVSATSNWVANWMVGLTFLPINNIIHQYA-FLMFTFFTFTFAIF 487
Query: 282 SWIFLPETKDRTLQEIEDE 226
+W F+PETK ++ I E
Sbjct: 488 TWKFVPETKGKSPSAIRKE 506
>Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical
protein Y57G11C.23 protein.
Length = 532
Score = 34.7 bits (76), Expect = 0.085
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = -3
Query: 450 EIFPLQFRSVSGALSAVFFSFHLFI--TVKTYRYLRNSLGLHGTYLIYAAIVTYCLVVSW 277
E+ P R++SGAL + + T K ++ L ++I I T L++ W
Sbjct: 412 ELMPTDVRTISGALMNILMKIGTILASTTKPIKFWYEPL----LFIINTIICTGGLIIVW 467
Query: 276 IFLPETKDRTLQEI-EDEFRGGPPTRDRDENTAE 178
+LPE+K+ +Q + +D+ D D N E
Sbjct: 468 KYLPESKNMNMQLVGQDDI---DEDEDDDSNKTE 498
>Z83113-3|CAB05545.1| 479|Caenorhabditis elegans Hypothetical
protein K08H10.6 protein.
Length = 479
Score = 34.7 bits (76), Expect = 0.085
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 1/151 (0%)
Frame = -3
Query: 684 IIMNAAAIYFMTKFRRRVILISTTMLCVAVLLLISAYSYAKTSNLLPF-DHPSIGAILLH 508
I+ A M K RR +LI++ ++ + + + + + S F P + +L
Sbjct: 327 IVSALLAAIAMDKIGRRPLLITSLLVLALINIFMMSLVFLYDSTKDSFLAWPFLALFVLF 386
Query: 507 VHMFTIATGSVPLPMTISGEIFPLQFRSVSGALSAVFFSFHLFITVKTYRYLRNSLGLHG 328
+F+I G P + I E+ P S + S FI Y L S+G
Sbjct: 387 TFVFSIGIG--PAAVFIGAELAPPGTISKMQSYSTSVQFAGSFICPIIYLQLVESIGGFA 444
Query: 327 TYLIYAAIVTYCLVVSWIFLPETKDRTLQEI 235
++++ +T +++LPETK ++ EI
Sbjct: 445 -FMLFIVPLTITAAYFYMYLPETKGKSPVEI 474
>Z82288-7|CAB05326.1| 390|Caenorhabditis elegans Hypothetical
protein ZK896.9 protein.
Length = 390
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -3
Query: 684 IIMNAAAIYFMTKFRRRVILISTTMLCVAVLLLISAYSYAKTSNLLPFDHP 532
I++N A YF+ FR ++ + +A + S Y Y + LP D P
Sbjct: 326 IVLNCIAAYFLFNFRPSILFLVGASGVIAAVFAYSMYPYKASHQALPTDAP 376
>AL161712-10|CAC35900.1| 533|Caenorhabditis elegans Hypothetical
protein Y66D12A.13 protein.
Length = 533
Score = 32.7 bits (71), Expect = 0.34
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Frame = -3
Query: 465 MTISGEIFPLQFRSVSGALSAVFFSFHLFITVKTYRYLRNSLGLHGT-YLIYAAIVTYCL 289
+ I+ E+FP R+++ A V + Y LG G+ YLI I +
Sbjct: 433 LLITAEMFPTGIRNIASAHINVCGRLGNVFGPMVFSY---KLGFAGSGYLILGVICLLDV 489
Query: 288 VVSWIFLPETKDRTLQEIEDEFRGGPPTRDRDENTAEI 175
+V IF+PETK++ L + G P+R + E+
Sbjct: 490 IVFHIFIPETKNQPLPQ-------GMPSRKKQRKDPEV 520
>Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 31.5 bits (68), Expect = 0.79
Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Frame = -3
Query: 507 VHMFTIATGSVPLPMTI----SGEIFPLQFRSVSGALSAVFFSFHLFITVKTYRYLRNSL 340
V M +A G+V + T+ + E+FP R+ + + F +L +
Sbjct: 435 VIMLMVAKGAVSVAYTVMYTYTSELFPTVIRNTAVGCCSTIARFGAISASFIAFFLVDRF 494
Query: 339 GLHGTYLIYAAIVTYCLVVSWIFLPETKDRTLQEIEDEFRG 217
G + + + +VSW LPET ++ L + E G
Sbjct: 495 GRIVMIIPFTILALCASIVSWTMLPETVNQQLPDSISEVEG 535
>Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 31.5 bits (68), Expect = 0.79
Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Frame = -3
Query: 507 VHMFTIATGSVPLPMTI----SGEIFPLQFRSVSGALSAVFFSFHLFITVKTYRYLRNSL 340
V M +A G+V + T+ + E+FP R+ + + F +L +
Sbjct: 401 VIMLMVAKGAVSVAYTVMYTYTSELFPTVIRNTAVGCCSTIARFGAISASFIAFFLVDRF 460
Query: 339 GLHGTYLIYAAIVTYCLVVSWIFLPETKDRTLQEIEDEFRG 217
G + + + +VSW LPET ++ L + E G
Sbjct: 461 GRIVMIIPFTILALCASIVSWTMLPETVNQQLPDSISEVEG 501
>AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 31.5 bits (68), Expect = 0.79
Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Frame = -3
Query: 507 VHMFTIATGSVPLPMTI----SGEIFPLQFRSVSGALSAVFFSFHLFITVKTYRYLRNSL 340
V M +A G+V + T+ + E+FP R+ + + F +L +
Sbjct: 435 VIMLMVAKGAVSVAYTVMYTYTSELFPTVIRNTAVGCCSTIARFGAISASFIAFFLVDRF 494
Query: 339 GLHGTYLIYAAIVTYCLVVSWIFLPETKDRTLQEIEDEFRG 217
G + + + +VSW LPET ++ L + E G
Sbjct: 495 GRIVMIIPFTILALCASIVSWTMLPETVNQQLPDSISEVEG 535
>AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 31.5 bits (68), Expect = 0.79
Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Frame = -3
Query: 507 VHMFTIATGSVPLPMTI----SGEIFPLQFRSVSGALSAVFFSFHLFITVKTYRYLRNSL 340
V M +A G+V + T+ + E+FP R+ + + F +L +
Sbjct: 401 VIMLMVAKGAVSVAYTVMYTYTSELFPTVIRNTAVGCCSTIARFGAISASFIAFFLVDRF 460
Query: 339 GLHGTYLIYAAIVTYCLVVSWIFLPETKDRTLQEIEDEFRG 217
G + + + +VSW LPET ++ L + E G
Sbjct: 461 GRIVMIIPFTILALCASIVSWTMLPETVNQQLPDSISEVEG 501
>U40952-1|AAK68681.3| 436|Caenorhabditis elegans Hypothetical
protein C03B1.13 protein.
Length = 436
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/50 (28%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = -3
Query: 372 VKTYRYLR--NSLGLHGTYLIYAAIVTYCLVVSWIFLPETKDRTLQEIED 229
++T+ YL N +G + ++ A ++ +++LPETK R+ +EI++
Sbjct: 358 IETFFYLTVDNLVGGYSLLILAAGPALVAAILIYLYLPETKGRSSEEIQN 407
>Z81587-3|CAB04700.1| 362|Caenorhabditis elegans Hypothetical
protein T06G6.4 protein.
Length = 362
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -3
Query: 372 VKTYRYLRNSLGLHGTYLIYAAIVTYCLVVSWIFLPETKDRTLQ 241
++T RY+RN H IY +V+ CL S F E R+ Q
Sbjct: 1 METNRYVRNIFSAHSQNPIYILVVSTCLFGSISFKIEKMQRSQQ 44
>AC090999-20|AAP46262.1| 132|Caenorhabditis elegans Hypothetical
protein Y82E9BR.16b protein.
Length = 132
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/99 (21%), Positives = 35/99 (35%)
Frame = -3
Query: 486 TGSVPLPMTISGEIFPLQFRSVSGALSAVFFSFHLFITVKTYRYLRNSLGLHGTYLIYAA 307
TG T S E+FP R+ + + ++ G + +
Sbjct: 22 TGVYAAIYTYSPELFPTVIRNTAMGFCSTIARVGAIAASYISMWIAEQFGKVFMIIPFGC 81
Query: 306 IVTYCLVVSWIFLPETKDRTLQEIEDEFRGGPPTRDRDE 190
+ V++ +FLPET + L E +E G R E
Sbjct: 82 MAVLAAVMTLLFLPETMGKPLPESIEEIEEGDSYRSSHE 120
>AC090999-19|AAK26156.1| 575|Caenorhabditis elegans Hypothetical
protein Y82E9BR.16a protein.
Length = 575
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/99 (21%), Positives = 35/99 (35%)
Frame = -3
Query: 486 TGSVPLPMTISGEIFPLQFRSVSGALSAVFFSFHLFITVKTYRYLRNSLGLHGTYLIYAA 307
TG T S E+FP R+ + + ++ G + +
Sbjct: 465 TGVYAAIYTYSPELFPTVIRNTAMGFCSTIARVGAIAASYISMWIAEQFGKVFMIIPFGC 524
Query: 306 IVTYCLVVSWIFLPETKDRTLQEIEDEFRGGPPTRDRDE 190
+ V++ +FLPET + L E +E G R E
Sbjct: 525 MAVLAAVMTLLFLPETMGKPLPESIEEIEEGDSYRSSHE 563
>Z83217-7|CAL69737.1| 223|Caenorhabditis elegans Hypothetical
protein C10C6.7b protein.
Length = 223
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = -3
Query: 510 HVHMFTIATGSVPLPMTISGEIFPLQFRSVSGALSAVFFSFHLFITVKTYRYLRNSLGLH 331
++ M + + S PLP T + + +GAL +FF +++++ VK +R G
Sbjct: 148 YIQMVSKCSSSAPLPTTSPIILIVIPILVYAGAL--MFFIYNMYMVVKCITVIRGDSGRG 205
Query: 330 G 328
G
Sbjct: 206 G 206
>Z77652-11|CAI70405.1| 310|Caenorhabditis elegans Hypothetical
protein C06B3.13 protein.
Length = 310
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -3
Query: 627 LISTTMLCVAVLLLISAYSYAKTSNL 550
L+ T LC++++L+IS Y+Y + L
Sbjct: 11 LMMFTALCISLILMISVYTYKRKDQL 36
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,360,939
Number of Sequences: 27780
Number of extensions: 415512
Number of successful extensions: 1075
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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