Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt18e19
(747 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT025921-1|ABG02165.1| 158|Drosophila melanogaster IP11020p pro... 208 8e-54
AY070680-1|AAL48151.1| 183|Drosophila melanogaster RH17496p pro... 208 8e-54
AE014298-2846|AAN09490.1| 183|Drosophila melanogaster CG12203-P... 208 8e-54
BT001482-1|AAN71237.1| 187|Drosophila melanogaster LD22171p pro... 32 0.72
AY119609-1|AAM50263.1| 349|Drosophila melanogaster LD34464p pro... 30 3.9
AE013599-54|AAF57347.2| 281|Drosophila melanogaster CG2944-PF, ... 30 3.9
AE013599-53|AAM68374.1| 343|Drosophila melanogaster CG2944-PC, ... 30 3.9
AE013599-52|AAM68373.1| 363|Drosophila melanogaster CG2944-PD, ... 30 3.9
AE013599-51|AAM68372.1| 351|Drosophila melanogaster CG2944-PE, ... 30 3.9
AE013599-50|AAF57346.1| 349|Drosophila melanogaster CG2944-PA, ... 30 3.9
AE013599-49|AAG22337.2| 343|Drosophila melanogaster CG2944-PB, ... 30 3.9
AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC... 29 8.9
>BT025921-1|ABG02165.1| 158|Drosophila melanogaster IP11020p
protein.
Length = 158
Score = 208 bits (507), Expect = 8e-54
Identities = 89/146 (60%), Positives = 112/146 (76%)
Frame = -1
Query: 540 IENESVLALPEEARHQKALDSTIVVPTKADLSPILGVPEEHIKTRRVRIYQPAKNAMQSG 361
++ ++ LA PEE + L I VPT +LSPI GVPEEHI+ RRVRI+ P KNAMQSG
Sbjct: 13 LDPKTALARPEELEQRNKLSGKITVPTAVNLSPISGVPEEHIRERRVRIHIPPKNAMQSG 72
Query: 360 TNNIHHWEMEFDTRQRWENPLMGWTSSGDPLSNVKIQFRSPDEAIEHCEKNGWMWYIDVP 181
T+N++ W++EFD R+RWENPLMGW SSGDPLSN+ +QF SP+EAI CE+NGW WY+D
Sbjct: 73 TDNVNTWQIEFDNRERWENPLMGWASSGDPLSNMNVQFGSPEEAITFCERNGWRWYVDGA 132
Query: 180 KTEKDFKPKSYGLNFAWNRRTRVSTK 103
K + K+YG+NFAWN+RTRVSTK
Sbjct: 133 AKPKKERVKNYGINFAWNKRTRVSTK 158
>AY070680-1|AAL48151.1| 183|Drosophila melanogaster RH17496p
protein.
Length = 183
Score = 208 bits (507), Expect = 8e-54
Identities = 89/146 (60%), Positives = 112/146 (76%)
Frame = -1
Query: 540 IENESVLALPEEARHQKALDSTIVVPTKADLSPILGVPEEHIKTRRVRIYQPAKNAMQSG 361
++ ++ LA PEE + L I VPT +LSPI GVPEEHI+ RRVRI+ P KNAMQSG
Sbjct: 38 LDPKTALARPEELEQRNKLSGKITVPTAVNLSPISGVPEEHIRERRVRIHIPPKNAMQSG 97
Query: 360 TNNIHHWEMEFDTRQRWENPLMGWTSSGDPLSNVKIQFRSPDEAIEHCEKNGWMWYIDVP 181
T+N++ W++EFD R+RWENPLMGW SSGDPLSN+ +QF SP+EAI CE+NGW WY+D
Sbjct: 98 TDNVNTWQIEFDNRERWENPLMGWASSGDPLSNMNVQFGSPEEAITFCERNGWRWYVDGA 157
Query: 180 KTEKDFKPKSYGLNFAWNRRTRVSTK 103
K + K+YG+NFAWN+RTRVSTK
Sbjct: 158 AKPKKERVKNYGINFAWNKRTRVSTK 183
>AE014298-2846|AAN09490.1| 183|Drosophila melanogaster CG12203-PA
protein.
Length = 183
Score = 208 bits (507), Expect = 8e-54
Identities = 89/146 (60%), Positives = 112/146 (76%)
Frame = -1
Query: 540 IENESVLALPEEARHQKALDSTIVVPTKADLSPILGVPEEHIKTRRVRIYQPAKNAMQSG 361
++ ++ LA PEE + L I VPT +LSPI GVPEEHI+ RRVRI+ P KNAMQSG
Sbjct: 38 LDPKTALARPEELEQRNKLSGKITVPTAVNLSPISGVPEEHIRERRVRIHIPPKNAMQSG 97
Query: 360 TNNIHHWEMEFDTRQRWENPLMGWTSSGDPLSNVKIQFRSPDEAIEHCEKNGWMWYIDVP 181
T+N++ W++EFD R+RWENPLMGW SSGDPLSN+ +QF SP+EAI CE+NGW WY+D
Sbjct: 98 TDNVNTWQIEFDNRERWENPLMGWASSGDPLSNMNVQFGSPEEAITFCERNGWRWYVDGA 157
Query: 180 KTEKDFKPKSYGLNFAWNRRTRVSTK 103
K + K+YG+NFAWN+RTRVSTK
Sbjct: 158 AKPKKERVKNYGINFAWNKRTRVSTK 183
>BT001482-1|AAN71237.1| 187|Drosophila melanogaster LD22171p
protein.
Length = 187
Score = 32.3 bits (70), Expect = 0.72
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -1
Query: 549 APKIENESVLALPEEARHQKALDSTIVVPTKADLSPILGVPEEHIKTRRVRIYQPAK 379
AP N SV +P+ + A VP+ + +P+ + +KT RVR + P +
Sbjct: 94 APVRPNVSVTPVPDRGPSRSASPVPAHVPSPSTATPVHAIDPHRLKTSRVRAHAPVR 150
>AY119609-1|AAM50263.1| 349|Drosophila melanogaster LD34464p
protein.
Length = 349
Score = 29.9 bits (64), Expect = 3.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -1
Query: 360 TNNIHHWEMEFDTRQRWENPLMGWTSSGDPLSNVKIQ 250
T +H WE+ + TRQR + ++G ++ PL +V Q
Sbjct: 166 TKGLHIWEIYWPTRQRGTHAVVGVCTADAPLHSVGYQ 202
>AE013599-54|AAF57347.2| 281|Drosophila melanogaster CG2944-PF,
isoform F protein.
Length = 281
Score = 29.9 bits (64), Expect = 3.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -1
Query: 360 TNNIHHWEMEFDTRQRWENPLMGWTSSGDPLSNVKIQ 250
T +H WE+ + TRQR + ++G ++ PL +V Q
Sbjct: 98 TKGLHIWEIYWPTRQRGTHAVVGVCTADAPLHSVGYQ 134
>AE013599-53|AAM68374.1| 343|Drosophila melanogaster CG2944-PC,
isoform C protein.
Length = 343
Score = 29.9 bits (64), Expect = 3.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -1
Query: 360 TNNIHHWEMEFDTRQRWENPLMGWTSSGDPLSNVKIQ 250
T +H WE+ + TRQR + ++G ++ PL +V Q
Sbjct: 160 TKGLHIWEIYWPTRQRGTHAVVGVCTADAPLHSVGYQ 196
>AE013599-52|AAM68373.1| 363|Drosophila melanogaster CG2944-PD,
isoform D protein.
Length = 363
Score = 29.9 bits (64), Expect = 3.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -1
Query: 360 TNNIHHWEMEFDTRQRWENPLMGWTSSGDPLSNVKIQ 250
T +H WE+ + TRQR + ++G ++ PL +V Q
Sbjct: 180 TKGLHIWEIYWPTRQRGTHAVVGVCTADAPLHSVGYQ 216
>AE013599-51|AAM68372.1| 351|Drosophila melanogaster CG2944-PE,
isoform E protein.
Length = 351
Score = 29.9 bits (64), Expect = 3.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -1
Query: 360 TNNIHHWEMEFDTRQRWENPLMGWTSSGDPLSNVKIQ 250
T +H WE+ + TRQR + ++G ++ PL +V Q
Sbjct: 168 TKGLHIWEIYWPTRQRGTHAVVGVCTADAPLHSVGYQ 204
>AE013599-50|AAF57346.1| 349|Drosophila melanogaster CG2944-PA,
isoform A protein.
Length = 349
Score = 29.9 bits (64), Expect = 3.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -1
Query: 360 TNNIHHWEMEFDTRQRWENPLMGWTSSGDPLSNVKIQ 250
T +H WE+ + TRQR + ++G ++ PL +V Q
Sbjct: 166 TKGLHIWEIYWPTRQRGTHAVVGVCTADAPLHSVGYQ 202
>AE013599-49|AAG22337.2| 343|Drosophila melanogaster CG2944-PB,
isoform B protein.
Length = 343
Score = 29.9 bits (64), Expect = 3.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -1
Query: 360 TNNIHHWEMEFDTRQRWENPLMGWTSSGDPLSNVKIQ 250
T +H WE+ + TRQR + ++G ++ PL +V Q
Sbjct: 160 TKGLHIWEIYWPTRQRGTHAVVGVCTADAPLHSVGYQ 196
>AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC
protein.
Length = 4699
Score = 28.7 bits (61), Expect = 8.9
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 391 INTYTA-SLNMFFWDS*NGAEICLRWHYNSGIQ 486
+NT + S+ MF+ D+ G+ C W Y G Q
Sbjct: 1874 VNTKSIQSMKMFYADAQTGSNTCAEWAYRGGCQ 1906
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,598,121
Number of Sequences: 53049
Number of extensions: 769478
Number of successful extensions: 1767
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1765
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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