Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt18e08
(827 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1118 + 27756288-27756337,27756505-27756619,27756883-277570... 186 1e-47
01_06_0663 - 30991390-30992340 102 4e-22
06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,831... 86 3e-17
05_07_0134 - 27911920-27912762 79 4e-15
01_05_0431 - 22084474-22084635,22084740-22084844,22084931-220850... 77 1e-14
02_04_0261 + 21363787-21363891,21364185-21364286,21365854-213659... 77 2e-14
06_01_0080 + 644021-645463 40 0.002
06_03_0219 - 18227559-18227858,18227864-18228340 35 0.091
02_01_0384 - 2781362-2782299,2782320-2782428 33 0.28
12_02_0842 - 23588826-23589198,23589548-23590203 32 0.48
07_01_0885 + 7353926-7354770,7354845-7355487 30 2.0
03_02_0386 + 8009884-8010133,8010274-8010338,8010545-8010658,801... 30 2.0
04_01_0035 - 433848-434372,434905-435381 30 2.6
02_02_0184 - 7581345-7581769,7581880-7582296,7582891-7583661,758... 29 3.4
07_03_1086 + 23858419-23859423,23859527-23859610 29 4.5
11_06_0689 - 26294961-26294976,26295271-26295414,26295506-262959... 29 6.0
06_02_0014 + 10585888-10586422,10586621-10586652,10587127-10587216 29 6.0
06_03_1344 - 29472139-29473292,29474478-29475386,29475504-294756... 28 7.9
02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530 28 7.9
>06_03_1118 +
27756288-27756337,27756505-27756619,27756883-27757033,
27757219-27757301,27757424-27757519,27757615-27757757,
27757858-27757942,27758158-27758237,27758335-27758422
Length = 296
Score = 186 bits (454), Expect = 1e-47
Identities = 106/270 (39%), Positives = 156/270 (57%), Gaps = 12/270 (4%)
Frame = -3
Query: 780 MAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXVSILTSNKVVLDVY 601
MA NLV G+ V +D +++ + + +G+ S +++L S+ VLDVY
Sbjct: 1 MARNLVMAGYKVTVHDVNENTMKKFSDDGIPTKLSPLEVSKSSDVVITMLPSSAHVLDVY 60
Query: 600 LGKDGVVAHAK-KGS-LLIDSSTIDPNVPKQIFP----IALEKGLGFT------DAPVSG 457
G++G++A+ G L IDSST+DP ++I L++ + DAPVSG
Sbjct: 61 NGRNGLLANGGCLGPWLYIDSSTVDPQTSRKISMDISRCTLKEKKAYAEKPMMLDAPVSG 120
Query: 456 GVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGM 277
GV A+ L FM GG +E + + PLL MG K +CG G+G VAK+ NNM M I+ +
Sbjct: 121 GVPAAEAGKLTFMVGGSEEAYLAAKPLLLSMGKKTIYCGGAGNGSVAKICNNMAMAISML 180
Query: 276 ATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNEL 97
+E +G +G++ VL D+ N SSAR WS++ Y PVPG++ PSSRNYDGGF ++L
Sbjct: 181 GVSEAFALGQNLGIKASVLTDIFNCSSARCWSSDTYNPVPGVMMDVPSSRNYDGGFTSKL 240
Query: 96 MVKDLELASGMALGIRSPIPLGAVATQLYR 7
M KDL+LA A G+ P G+ A ++YR
Sbjct: 241 MTKDLDLAMASASGVGFNCPFGSQALEIYR 270
>01_06_0663 - 30991390-30992340
Length = 316
Score = 102 bits (244), Expect = 4e-22
Identities = 82/270 (30%), Positives = 118/270 (43%), Gaps = 1/270 (0%)
Frame = -3
Query: 816 VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXVS 637
VA++G G MG MA +L+ G+ + Y+ + G T A S
Sbjct: 22 VAWVGTGVMGQSMAGHLLAAGYALTVYNRTASKAEGLVSRGATLAESPRAAAAAADVIFL 81
Query: 636 ILTSNKVVLDVYLGKD-GVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVS 460
++ V L G +A G LL+D +T DP + +I A K DAPVS
Sbjct: 82 MVGFPSDVRSTSLDPSTGALAGLAPGGLLVDMTTSDPTLAAEIAEAAAAKSCAAVDAPVS 141
Query: 459 GGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITG 280
GG GA++ATL+ AGG R PL K+MG + G G+GQ AKL N + + T
Sbjct: 142 GGDRGARSATLSIFAGGDAAVVARLAPLFKLMG-NALYMGGPGAGQRAKLGNQIAIASTM 200
Query: 279 MATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNE 100
+ E M K GL+ L+ ++ +A S S ++Y R+ GF
Sbjct: 201 VGLVEGMVYAHKAGLDVAKWLEAISTGAAGSKSLDLY-------GKRMLERDMAAGFYVR 253
Query: 99 LMVKDLELASGMALGIRSPIPLGAVATQLY 10
VKDL + + +P A+A QLY
Sbjct: 254 HFVKDLGICLSECQAMGLALPGLALAHQLY 283
>06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,
8313443-8313523,8313706-8313779,8313865-8313919,
8314031-8314079,8314222-8314359,8314455-8314536,
8315131-8315209,8315357-8315400,8315479-8315673,
8316110-8316185,8317427-8317507,8317623-8317703,
8318128-8318204,8318402-8318499,8318672-8318809,
8319397-8319478,8319564-8319642,8319885-8319931,
8320014-8320228,8320330-8320450,8320529-8320648,
8320731-8320849,8320964-8321036,8321112-8321231,
8321538-8321606,8321756-8321926,8322004-8322051,
8322192-8322333,8323244-8323341,8323684-8323828,
8323928-8324013,8324112-8324222,8324456-8324530,
8324836-8324901,8325036-8325224,8325315-8325425,
8326616-8326696,8327192-8327371
Length = 1385
Score = 86.2 bits (204), Expect = 3e-17
Identities = 77/275 (28%), Positives = 127/275 (46%), Gaps = 4/275 (1%)
Frame = -3
Query: 822 KNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXX 643
K + F+GLG MG MA++L+K GF+V YD K L G +S
Sbjct: 324 KTIGFIGLGAMGFGMASHLLKSGFSVIAYDVYKPTLARFTDLGGLTKDS-PEEVSKDVEI 382
Query: 642 VSILTSNKVVLD-VYLGKDGVVAHAKKGSLLIDSSTIDPN-VPKQIFPIALE-KGLGFTD 472
+ I+ +N+V + V G G V+ G+ +I SST+ P V K + E + + D
Sbjct: 383 LVIMVANEVQAENVLYGNAGAVSVMAAGTSIILSSTVSPGFVIKLKERLEAECRDIKLVD 442
Query: 471 APVSGGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHC-GQIGSGQVAKLTNNML 295
APVSGGV A TL +K + S+ + + K + G G+ K+ N +L
Sbjct: 443 APVSGGVKRAAEGTLT--TNMQKLVHDCSIFYVTALSEKLYVIKGGCGAASSVKMVNQLL 500
Query: 294 MGITGMATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDG 115
G+ + AE M G ++ L + L +++ ++ SW VP ++ +Y
Sbjct: 501 AGVHIASAAEAMAFGARLNLRTRRLFEIIQHARGYSWM--FGNRVPHML-----DNDYTP 553
Query: 114 GFKNELMVKDLELASGMALGIRSPIPLGAVATQLY 10
++ VKDL + S + R P+ + ++A QL+
Sbjct: 554 YSAVDIFVKDLGIVSHESSNARIPLHVSSIAHQLF 588
>05_07_0134 - 27911920-27912762
Length = 280
Score = 79.0 bits (186), Expect = 4e-15
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 1/205 (0%)
Frame = -3
Query: 780 MAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXVSILTSNKVVLDVY 601
MAA L+ GF V Y + A G + A S +++ + V V
Sbjct: 1 MAARLLAAGFAVTAYARTPAKAEALVAAGASLAGSPAAVAAACDVVFTMVGNPGDVRAVV 60
Query: 600 L-GKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNATLA 424
L GV+A + G +L+D ++ P++ +++ A G D+PVSGG +GA++ LA
Sbjct: 61 LDAASGVLAGLRPGGVLVDCTSSSPSLAREVAAAARAAGCYAVDSPVSGGDVGARDGALA 120
Query: 423 FMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNMGIK 244
+AGG + PL +G + + G GSGQ +K+ N + + + +E +
Sbjct: 121 LLAGGDEAVVSWLAPLFAHLG-RPTYMGPPGSGQSSKIANQIAVAGAVVGASEALAFANA 179
Query: 243 MGLEPKVLLDVLNNSSARSWSTEVY 169
GL+ + LD ++ +A S +++
Sbjct: 180 AGLDAPLFLDAVSKGAAGSRVMDIF 204
>01_05_0431 -
22084474-22084635,22084740-22084844,22084931-22085003,
22085109-22085179,22085429-22085548,22085631-22085715,
22085812-22085867,22085978-22086053,22086546-22086611,
22086843-22087060
Length = 343
Score = 77.4 bits (182), Expect = 1e-14
Identities = 65/273 (23%), Positives = 112/273 (41%), Gaps = 2/273 (0%)
Frame = -3
Query: 816 VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXVS 637
V FLGLG MG MA+NL+ G V ++ ++ + G S +
Sbjct: 53 VGFLGLGIMGAPMASNLINAGCDVTVWNRTRSKCDPLLSLGAKYEPSPADVASSCDVTFA 112
Query: 636 ILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTD-APVS 460
+L + ++V G +G G +D ST+D K I G F + S
Sbjct: 113 MLADPESAVEVACGANGAAQGMAPGKGYVDVSTVDAATSKLIGKHITSTGASFLERCDFS 172
Query: 459 GGVMGAQNATLAFMA-GGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGIT 283
+G F + + ++ + + +F G +G G KL NM+MG
Sbjct: 173 SCTVGPMLTRYLFSRLQFQAQKSQQKMGCSSFLPQSRFFLGDVGKGADMKLVVNMVMGSM 232
Query: 282 GMATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKN 103
++ +E + + K+GL+P L++V++ + + P+ L + Y F
Sbjct: 233 MVSFSEGLLLSEKVGLDPNTLVEVISQGA-------ISAPMFSLKGPSMVKAAYPTAFPL 285
Query: 102 ELMVKDLELASGMALGIRSPIPLGAVATQLYRI 4
+ KDL LA +A + IP A A +LY++
Sbjct: 286 KHQQKDLRLALALAESVSQSIPTVAAANELYKV 318
>02_04_0261 +
21363787-21363891,21364185-21364286,21365854-21365964,
21366233-21366334,21366901-21367016,21367180-21367258,
21367347-21367517,21367617-21367712
Length = 293
Score = 76.6 bits (180), Expect = 2e-14
Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 2/165 (1%)
Frame = -3
Query: 495 EKGLGFTDAPVSGGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVA 316
+KG F +APVSG A++ L +A G K ++ +P V+G K F G+IG+G
Sbjct: 110 QKGGAFVEAPVSGSKKPAEDGQLVILAAGDKVLYDDMVPAFDVLGKKSFFLGEIGNGAKM 169
Query: 315 KLTNNMLMGITGMATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAP 136
KL NM+MG A +E +++ GL P+ LLDVL+ + + P+ L +
Sbjct: 170 KLVVNMIMGSMMNALSEGLSLADNSGLSPQTLLDVLDLGAIAN-------PMFKLKGPSM 222
Query: 135 SSRNYDGGFKNELMVKDLELASGMALGIRSPI--PLGAVATQLYR 7
+Y+ F + KD+ LA +ALG + + P+ A + + ++
Sbjct: 223 LQGSYNPAFPLKHQQKDMRLA--LALGDENAVSMPVAAASNEAFK 265
Score = 33.9 bits (74), Expect(2) = 0.002
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = -3
Query: 816 VAFLGLGNMGGFMAANLVKKGFTV 745
V FLGLG MG MAANL++ GF V
Sbjct: 3 VGFLGLGIMGKAMAANLLRHGFRV 26
Score = 25.8 bits (54), Expect(2) = 0.002
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 624 NKVVLDVYLGKDGVVAHAKKGSLLIDSSTID 532
N+ + V KDGV+ +G +D ST+D
Sbjct: 30 NRTLSKVVFDKDGVLEQIGEGKGYVDMSTVD 60
>06_01_0080 + 644021-645463
Length = 480
Score = 39.9 bits (89), Expect = 0.002
Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 14/186 (7%)
Frame = -3
Query: 816 VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPAN-SIXXXXXXXXXXV 640
+ GL MG +A N+ +KGF + Y+ + ++ + N +
Sbjct: 6 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVQRAKVEGNLPVYGFHDPASFVN 65
Query: 639 SILTSNKVVLDVYLGKD------GVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGF 478
SI V++ V G + AH ++G +ID ++ E+GL +
Sbjct: 66 SIQKPRVVIMLVKAGAPVDQTIATLAAHLEQGDCIIDGGNEWYENTERREKAMEERGLLY 125
Query: 477 TDAPVSGGVMGAQNATLAFMAGGRKEDFERSLP-LLKV------MGAKQFHCGQIGSGQV 319
VSGG GA+N + M GG E ++ LLKV G + G+ GSG
Sbjct: 126 LGMGVSGGEEGARNGP-SLMPGGSFEAYKYIEDILLKVAAQVPDSGPCVTYIGKGGSGNF 184
Query: 318 AKLTNN 301
K+ +N
Sbjct: 185 VKMVHN 190
>06_03_0219 - 18227559-18227858,18227864-18228340
Length = 258
Score = 34.7 bits (76), Expect = 0.091
Identities = 26/74 (35%), Positives = 35/74 (47%)
Frame = +2
Query: 275 AIPVMPINMLLVSLATCPEPICPQWNCLAPITLRRGRDLSKSSLRPPAMKARVAF*APMT 454
++PV+PI+ L V+L + P P C A T+RR S PP R+A P
Sbjct: 56 SLPVVPIH-LPVALLSLPRCRPPPAACAAS-TVRRPAAPSPPPASPPPPPPRLALRFPRR 113
Query: 455 PPDTGASVNPSPFS 496
PP+ PS FS
Sbjct: 114 PPELPPRRRPSRFS 127
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 33.1 bits (72), Expect = 0.28
Identities = 23/74 (31%), Positives = 30/74 (40%)
Frame = +2
Query: 311 SLATCPEPICPQWNCLAPITLRRGRDLSKSSLRPPAMKARVAF*APMTPPDTGASVNPSP 490
S A P P++ +T R LS ++ PA +R P +PP GAS P
Sbjct: 180 SSAIPPPATAPRFPPPRAMTARTALALSPTTSASPASPSRTRLAPPRSPPAGGASGAPRR 239
Query: 491 FSRAIGKICLGTFG 532
S A C G G
Sbjct: 240 SSSAASPSCAGVEG 253
>12_02_0842 - 23588826-23589198,23589548-23590203
Length = 342
Score = 32.3 bits (70), Expect = 0.48
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +2
Query: 131 LDGAVGTSPGTGQYTSVDQERADELFSTSNRTFGSSPILMPMFMHSAVAIPVMPINMLLV 310
LDG G G+Y + ++ AD+L + +R ++PIL P S + + + L
Sbjct: 128 LDGDERGCAG-GRYDWLLEDFADKLVNDHHRRMMAAPILPPWMSSSPSSSSSPSVTLSLA 186
Query: 311 SLATCPEPICP 343
S A P P P
Sbjct: 187 SAAVAPAPAAP 197
>07_01_0885 + 7353926-7354770,7354845-7355487
Length = 495
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -3
Query: 201 SSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLE 79
S+ R W E+YCPV ++ P+ + D + L + LE
Sbjct: 216 SAIRLWKVELYCPVVAMIMEHPAHQTKDEKLQFSLNYQHLE 256
>03_02_0386 +
8009884-8010133,8010274-8010338,8010545-8010658,
8010736-8010895,8010975-8011093,8011209-8011635,
8011834-8012057,8012863-8012973,8013056-8013188,
8013259-8013365,8013430-8013444,8013482-8013571,
8013855-8013917,8013973-8014053,8014136-8014208,
8014312-8014367,8014460-8014554,8014649-8014683,
8015449-8015525
Length = 764
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = -3
Query: 267 ECMNMGIKMGLEPKVLLDV-LNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMV 91
+C++MG++ G PK+ +DV L + R +V + L+ R+YDG + E M
Sbjct: 484 KCIDMGMEFGTLPKMDVDVPLTSLHIRRTLLDVPKKIDILIVIMADDRSYDG--EIEEMC 541
Query: 90 KDLELASGMALGIRSPIPLGAVATQL 13
+ L + L S L VA Q+
Sbjct: 542 ESLRIVYVFCLPCLSKRNLKRVARQI 567
>04_01_0035 - 433848-434372,434905-435381
Length = 333
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Frame = -3
Query: 822 KNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXX 643
K+V +GLG++G +A L G T+ Y+ S+ ++ + N +
Sbjct: 163 KHVGIIGLGSIGSLIAKRLQAFGCTI-SYN-SRRPKDSVSYNYFPDVTDLAAASDVLIVA 220
Query: 642 VSILTSNKVVLDVY----LGKDGVVAHAKKGSLLIDSSTI 535
++ + ++D LGKDGVV + +G ++ ++ I
Sbjct: 221 CALNDETRHIVDSSVLEALGKDGVVVNIARGGIVDEAELI 260
>02_02_0184 -
7581345-7581769,7581880-7582296,7582891-7583661,
7583894-7584437,7584794-7584961,7585019-7585101,
7585190-7585631
Length = 949
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 780 MAANLVKKGFTVRGYDPSKDALN 712
+A L+K+G RGYD SKD+ N
Sbjct: 251 VARRLLKQGLPFRGYDESKDSYN 273
>07_03_1086 + 23858419-23859423,23859527-23859610
Length = 362
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = -2
Query: 592 RWRCGSCEKRIASDRFEYNRSECSQTDLPYSPRERAGIHR 473
R R SC SEC DL ++P AGIHR
Sbjct: 10 RRRSTSCYSDSGDSSCSEPFSECGSDDLSFTPAAAAGIHR 49
>11_06_0689 -
26294961-26294976,26295271-26295414,26295506-26295909,
26296112-26296261,26296334-26296497,26296526-26296836,
26296948-26297084,26297276-26297416,26297821-26297867,
26297977-26298072,26298168-26298249,26298332-26298472,
26298607-26298702,26298809-26298877,26298959-26299030,
26299201-26299368,26299577-26299711,26299792-26299958,
26301213-26301369
Length = 898
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 445 THDSSRYRCICESQPFL*GYREDLFGNIRIYC 540
+H +S Y + E L +DL GNIR+YC
Sbjct: 370 SHAASGYHKVLEENRKLYNQIQDLRGNIRVYC 401
>06_02_0014 + 10585888-10586422,10586621-10586652,10587127-10587216
Length = 218
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +3
Query: 567 FSHEPQRHLCPGTRRARLYCWSIWKRPRRLHQRLQQWSWL 686
F E + G A L WS W R R +H R Q W WL
Sbjct: 68 FMQEEGGKVFTGRMCATLPWWSTW-RGRWIHLRDQPWLWL 106
>06_03_1344 -
29472139-29473292,29474478-29475386,29475504-29475618,
29476017-29476218,29477177-29477296,29477431-29477582,
29478177-29478461
Length = 978
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -3
Query: 816 VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVT 688
+A +G GN G F+A ++G T+ + S D + AA G +
Sbjct: 704 IAIVGFGNFGQFLARTFARQGHTLLAHSRS-DYSSLAASVGAS 745
>02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530
Length = 519
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +2
Query: 344 QWNCLAPITLRRG-RDLSKSSLRPPAMKARVAF*APMTPPDTGASVNPSPFSRA 502
+W+ AP+ G R+ + L PP A P PP A PSPF A
Sbjct: 236 RWSRAAPLPPHNGERERPRLVLDPPKRDASAT---PTPPPAEAARSRPSPFGAA 286
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,687,899
Number of Sequences: 37544
Number of extensions: 687385
Number of successful extensions: 2214
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2202
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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