Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt18e07
         (252 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    27   2.6  
BT022499-1|AAY54915.1|  246|Drosophila melanogaster IP07925p pro...    27   3.5  
BT001281-1|AAN71037.1|  397|Drosophila melanogaster AT07872p pro...    27   3.5  
AE014297-3231|AAF56061.2|  397|Drosophila melanogaster CG31139-P...    27   3.5  
AE014297-2909|AAF55835.1|  229|Drosophila melanogaster CG12278-P...    27   3.5  
BT016070-1|AAV36955.1|  940|Drosophila melanogaster LP07754p pro...    26   6.0  
AE014297-3032|AAN13881.1|  940|Drosophila melanogaster CG31198-P...    26   6.0  
AE014134-2567|AAS64744.1| 1259|Drosophila melanogaster CG15270-P...    26   8.0  
AE014134-2566|AAF53439.1| 1338|Drosophila melanogaster CG15270-P...    26   8.0  

>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
            protein.
          Length = 23015

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = -3

Query: 205  VCIQKLQK*GPKSNLTAGVSYFRFPSNHVCRMDLDCR 95
            +C+Q + +   KSN  +    F+F SN++C  +L+CR
Sbjct: 2593 LCLQGVCQGTCKSN--SSCPQFQFCSNNICTKELECR 2627


>BT022499-1|AAY54915.1|  246|Drosophila melanogaster IP07925p
           protein.
          Length = 246

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 230 CQPVSQYRSVYSKVAKIRPEKQFN 159
           C  V QYR ++ K  K +P+K F+
Sbjct: 103 CSVVDQYRGMWKKPKKPKPKKHFH 126


>BT001281-1|AAN71037.1|  397|Drosophila melanogaster AT07872p
           protein.
          Length = 397

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -2

Query: 110 GSRLSPEKQEMTFISQLRTPLIDTGHLCL 24
           GSR SPE+  +  +SQ R  L+D  +  L
Sbjct: 219 GSRSSPERDSLVRLSQRRPDLVDAQYTIL 247


>AE014297-3231|AAF56061.2|  397|Drosophila melanogaster CG31139-PA
           protein.
          Length = 397

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -2

Query: 110 GSRLSPEKQEMTFISQLRTPLIDTGHLCL 24
           GSR SPE+  +  +SQ R  L+D  +  L
Sbjct: 219 GSRSSPERDSLVRLSQRRPDLVDAQYTIL 247


>AE014297-2909|AAF55835.1|  229|Drosophila melanogaster CG12278-PA
           protein.
          Length = 229

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 230 CQPVSQYRSVYSKVAKIRPEKQFN 159
           C  V QYR ++ K  K +P+K F+
Sbjct: 86  CSVVDQYRGMWKKPKKPKPKKHFH 109


>BT016070-1|AAV36955.1|  940|Drosophila melanogaster LP07754p
           protein.
          Length = 940

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 111 WISIVARETRDDFYKPAKNSAY 46
           WI +++ +T +D Y  +KN  Y
Sbjct: 76  WIEVISNQTTNDIYLHSKNLTY 97


>AE014297-3032|AAN13881.1|  940|Drosophila melanogaster CG31198-PA
           protein.
          Length = 940

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 111 WISIVARETRDDFYKPAKNSAY 46
           WI +++ +T +D Y  +KN  Y
Sbjct: 76  WIEVISNQTTNDIYLHSKNLTY 97


>AE014134-2567|AAS64744.1| 1259|Drosophila melanogaster CG15270-PB,
           isoform B protein.
          Length = 1259

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +2

Query: 74  KSSLVSLATIEIHSAHVIARKAKVRYSGR*IAFRALFLQLLNTHCGIV 217
           K  ++S A   I +A    R+ KV Y+G  +  R L+L  + T C +V
Sbjct: 65  KGKIISCAKETIENASRQLRR-KVPYAGHLMTPRRLWLNKIPTQCDVV 111


>AE014134-2566|AAF53439.1| 1338|Drosophila melanogaster CG15270-PA,
           isoform A protein.
          Length = 1338

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +2

Query: 74  KSSLVSLATIEIHSAHVIARKAKVRYSGR*IAFRALFLQLLNTHCGIV 217
           K  ++S A   I +A    R+ KV Y+G  +  R L+L  + T C +V
Sbjct: 65  KGKIISCAKETIENASRQLRR-KVPYAGHLMTPRRLWLNKIPTQCDVV 111


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,887,115
Number of Sequences: 53049
Number of extensions: 185118
Number of successful extensions: 343
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 343
length of database: 24,988,368
effective HSP length: 63
effective length of database: 21,646,281
effective search space used: 432925620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)