Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt18d16
(688 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001450-1|AAN71205.1| 719|Drosophila melanogaster GH27257p pro... 33 0.28
AF145594-1|AAD38569.1| 721|Drosophila melanogaster BcDNA.GH0191... 33 0.28
AE014296-654|AAN11564.1| 710|Drosophila melanogaster CG12076-PB... 33 0.28
AE014296-653|AAF47768.2| 721|Drosophila melanogaster CG12076-PA... 33 0.28
AY122261-1|AAM52773.1| 344|Drosophila melanogaster SD09607p pro... 30 3.4
AE014297-2728|AAF55714.1| 324|Drosophila melanogaster CG4510-PA... 30 3.4
BT025079-1|ABE73250.1| 812|Drosophila melanogaster IP14914p pro... 29 4.5
BT010097-1|AAQ22566.1| 903|Drosophila melanogaster GH22187p pro... 29 4.5
AY058483-1|AAL13712.1| 944|Drosophila melanogaster GM13116p pro... 29 4.5
AE013599-2834|AAX52698.1| 903|Drosophila melanogaster CG10737-P... 29 4.5
AE013599-2833|AAF57597.2| 870|Drosophila melanogaster CG10737-P... 29 4.5
AE013599-2832|AAM68441.1| 944|Drosophila melanogaster CG10737-P... 29 4.5
AE013599-2831|AAM68440.1| 944|Drosophila melanogaster CG10737-P... 29 4.5
AE013599-2830|AAF57596.2| 870|Drosophila melanogaster CG10737-P... 29 4.5
AY070973-1|AAL48595.1| 349|Drosophila melanogaster RE07395p pro... 29 7.9
AE014297-1913|AAF55108.2| 349|Drosophila melanogaster CG33332-P... 29 7.9
>BT001450-1|AAN71205.1| 719|Drosophila melanogaster GH27257p
protein.
Length = 719
Score = 33.5 bits (73), Expect = 0.28
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 10/53 (18%)
Frame = -1
Query: 307 MRSMHHQLPPLPYVAP----------PGFSGALTPYDGIXXXXXXXXXPRYYD 179
MR+MH QLPPLP+V P G +GAL P RYYD
Sbjct: 526 MRNMHGQLPPLPFVPPFAQLPIPGAGAGAAGALPPGAAAAMYEQLPPPVRYYD 578
>AF145594-1|AAD38569.1| 721|Drosophila melanogaster BcDNA.GH01918
protein.
Length = 721
Score = 33.5 bits (73), Expect = 0.28
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 10/53 (18%)
Frame = -1
Query: 307 MRSMHHQLPPLPYVAP----------PGFSGALTPYDGIXXXXXXXXXPRYYD 179
MR+MH QLPPLP+V P G +GAL P RYYD
Sbjct: 528 MRNMHGQLPPLPFVPPFAQLPIPGAGAGAAGALPPGAAAAMYEQLPPPVRYYD 580
>AE014296-654|AAN11564.1| 710|Drosophila melanogaster CG12076-PB,
isoform B protein.
Length = 710
Score = 33.5 bits (73), Expect = 0.28
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 10/53 (18%)
Frame = -1
Query: 307 MRSMHHQLPPLPYVAP----------PGFSGALTPYDGIXXXXXXXXXPRYYD 179
MR+MH QLPPLP+V P G +GAL P RYYD
Sbjct: 517 MRNMHGQLPPLPFVPPFAQLPIPGAGAGAAGALPPGAAAAMYEQLPPPVRYYD 569
>AE014296-653|AAF47768.2| 721|Drosophila melanogaster CG12076-PA,
isoform A protein.
Length = 721
Score = 33.5 bits (73), Expect = 0.28
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 10/53 (18%)
Frame = -1
Query: 307 MRSMHHQLPPLPYVAP----------PGFSGALTPYDGIXXXXXXXXXPRYYD 179
MR+MH QLPPLP+V P G +GAL P RYYD
Sbjct: 528 MRNMHGQLPPLPFVPPFAQLPIPGAGAGAAGALPPGAAAAMYEQLPPPVRYYD 580
>AY122261-1|AAM52773.1| 344|Drosophila melanogaster SD09607p
protein.
Length = 344
Score = 29.9 bits (64), Expect = 3.4
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 25 KKLSVDHDKTCLNHVHDFAPEIDQQFAIKI-HLLTVHKIFYHKEEQNEDIQQ 177
++ ++H+K D P I ++F ++ LLT+HK+ Y K+E E ++
Sbjct: 32 EEYEIEHNKDQKPEKEDL-PAITKKFYQRVLELLTIHKVPYSKQEDEETYEE 82
>AE014297-2728|AAF55714.1| 324|Drosophila melanogaster CG4510-PA
protein.
Length = 324
Score = 29.9 bits (64), Expect = 3.4
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 25 KKLSVDHDKTCLNHVHDFAPEIDQQFAIKI-HLLTVHKIFYHKEEQNEDIQQ 177
++ ++H+K D P I ++F ++ LLT+HK+ Y K+E E ++
Sbjct: 12 EEYEIEHNKDQKPEKEDL-PAITKKFYQRVLELLTIHKVPYSKQEDEETYEE 62
>BT025079-1|ABE73250.1| 812|Drosophila melanogaster IP14914p
protein.
Length = 812
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 484 GPRNRRKIYQPPRNRVTGP 428
GP NR+K Y PP + V GP
Sbjct: 143 GPENRKKRYVPPPSNVVGP 161
>BT010097-1|AAQ22566.1| 903|Drosophila melanogaster GH22187p
protein.
Length = 903
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 484 GPRNRRKIYQPPRNRVTGP 428
GP NR+K Y PP + V GP
Sbjct: 122 GPENRKKRYVPPPSNVVGP 140
>AY058483-1|AAL13712.1| 944|Drosophila melanogaster GM13116p
protein.
Length = 944
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 484 GPRNRRKIYQPPRNRVTGP 428
GP NR+K Y PP + V GP
Sbjct: 143 GPENRKKRYVPPPSNVVGP 161
>AE013599-2834|AAX52698.1| 903|Drosophila melanogaster CG10737-PE,
isoform E protein.
Length = 903
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 484 GPRNRRKIYQPPRNRVTGP 428
GP NR+K Y PP + V GP
Sbjct: 122 GPENRKKRYVPPPSNVVGP 140
>AE013599-2833|AAF57597.2| 870|Drosophila melanogaster CG10737-PA,
isoform A protein.
Length = 870
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 484 GPRNRRKIYQPPRNRVTGP 428
GP NR+K Y PP + V GP
Sbjct: 143 GPENRKKRYVPPPSNVVGP 161
>AE013599-2832|AAM68441.1| 944|Drosophila melanogaster CG10737-PD,
isoform D protein.
Length = 944
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 484 GPRNRRKIYQPPRNRVTGP 428
GP NR+K Y PP + V GP
Sbjct: 143 GPENRKKRYVPPPSNVVGP 161
>AE013599-2831|AAM68440.1| 944|Drosophila melanogaster CG10737-PC,
isoform C protein.
Length = 944
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 484 GPRNRRKIYQPPRNRVTGP 428
GP NR+K Y PP + V GP
Sbjct: 143 GPENRKKRYVPPPSNVVGP 161
>AE013599-2830|AAF57596.2| 870|Drosophila melanogaster CG10737-PB,
isoform B protein.
Length = 870
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 484 GPRNRRKIYQPPRNRVTGP 428
GP NR+K Y PP + V GP
Sbjct: 143 GPENRKKRYVPPPSNVVGP 161
>AY070973-1|AAL48595.1| 349|Drosophila melanogaster RE07395p
protein.
Length = 349
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 304 RSMHHQLPPLPYVAPPGFSGALTP 233
RS H + PP+PY PP A P
Sbjct: 53 RSKHEEEPPVPYTQPPHLINASPP 76
>AE014297-1913|AAF55108.2| 349|Drosophila melanogaster CG33332-PA
protein.
Length = 349
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 304 RSMHHQLPPLPYVAPPGFSGALTP 233
RS H + PP+PY PP A P
Sbjct: 53 RSKHEEEPPVPYTQPPHLINASPP 76
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,364,236
Number of Sequences: 53049
Number of extensions: 366706
Number of successful extensions: 1010
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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