Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt18d14
(804 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 23 3.3
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 23 3.3
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 5.8
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 5.8
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 5.8
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 5.8
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 5.8
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 5.8
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 5.8
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 5.8
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 5.8
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 23.0 bits (47), Expect = 3.3
Identities = 9/39 (23%), Positives = 20/39 (51%)
Frame = -1
Query: 204 YIIDGISGNQVTKQRYLITIAHYRIIIYPVSLINVFYAH 88
+++D +SG Q K++ + H I + + ++Y H
Sbjct: 236 HMLDVVSGTQKKKRKIYLFSGHESNIASVLHALQLYYPH 274
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 23.0 bits (47), Expect = 3.3
Identities = 9/39 (23%), Positives = 20/39 (51%)
Frame = -1
Query: 204 YIIDGISGNQVTKQRYLITIAHYRIIIYPVSLINVFYAH 88
+++D +SG Q K++ + H I + + ++Y H
Sbjct: 251 HMLDVVSGTQKKKRKIYLFSGHESNIASVLHALQLYYPH 289
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.8
Identities = 8/32 (25%), Positives = 17/32 (53%)
Frame = +1
Query: 643 NAEYKTHQRNCSRMSSLSLEVIYFELVVYCGS 738
N Y T+ + + +++E I + +YCG+
Sbjct: 98 NNNYNTNYKKLQYYNIINIEQIPVPVPIYCGN 129
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.8
Identities = 8/32 (25%), Positives = 17/32 (53%)
Frame = +1
Query: 643 NAEYKTHQRNCSRMSSLSLEVIYFELVVYCGS 738
N Y T+ + + +++E I + +YCG+
Sbjct: 98 NNNYNTNYKKLQYYNIINIEQIPVPVPIYCGN 129
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.8
Identities = 8/32 (25%), Positives = 17/32 (53%)
Frame = +1
Query: 643 NAEYKTHQRNCSRMSSLSLEVIYFELVVYCGS 738
N Y T+ + + +++E I + +YCG+
Sbjct: 98 NNNYNTNYKKLQYYNIINIEQIPVPVPIYCGN 129
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.8
Identities = 8/32 (25%), Positives = 17/32 (53%)
Frame = +1
Query: 643 NAEYKTHQRNCSRMSSLSLEVIYFELVVYCGS 738
N Y T+ + + +++E I + +YCG+
Sbjct: 98 NNNYNTNYKKLQYYNIINIEQIPVPVPIYCGN 129
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.8
Identities = 8/32 (25%), Positives = 17/32 (53%)
Frame = +1
Query: 643 NAEYKTHQRNCSRMSSLSLEVIYFELVVYCGS 738
N Y T+ + + +++E I + +YCG+
Sbjct: 98 NNNYNTNYKKLQYYNIINIEQIPVPVPIYCGN 129
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.8
Identities = 8/32 (25%), Positives = 17/32 (53%)
Frame = +1
Query: 643 NAEYKTHQRNCSRMSSLSLEVIYFELVVYCGS 738
N Y T+ + + +++E I + +YCG+
Sbjct: 98 NNNYNTNYKKLQYYNIINIEQIPVPVPIYCGN 129
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.8
Identities = 8/32 (25%), Positives = 17/32 (53%)
Frame = +1
Query: 643 NAEYKTHQRNCSRMSSLSLEVIYFELVVYCGS 738
N Y T+ + + +++E I + +YCG+
Sbjct: 102 NNNYNTNYKKLQYYNIINIEQIPVPVPIYCGN 133
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.8
Identities = 8/32 (25%), Positives = 17/32 (53%)
Frame = +1
Query: 643 NAEYKTHQRNCSRMSSLSLEVIYFELVVYCGS 738
N Y T+ + + +++E I + +YCG+
Sbjct: 98 NNNYNTNYKKLQYYNIINIEQIPVPVPIYCGN 129
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 5.8
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = -2
Query: 590 KLICHFTNTVFFLYSNHAMNYQCYRYNTSFPGTMPMQPVF 471
K+I +N + Y+N+ NY+ YN ++ +P+ F
Sbjct: 313 KIISSLSNN--YNYNNYNNNYKPLHYNINYIEQIPVPVPF 350
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,271
Number of Sequences: 438
Number of extensions: 4752
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25489170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -