Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt18d07
(791 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC009274-1|AAH09274.1| 422|Homo sapiens REX4, RNA exonuclease 4... 225 2e-58
AL158826-21|CAI12849.1| 422|Homo sapiens REX4, RNA exonuclease ... 225 2e-58
AK025493-1|BAB15152.1| 422|Homo sapiens protein ( Homo sapiens ... 225 2e-58
AF295774-1|AAG02123.1| 422|Homo sapiens XPMC2H protein. 225 2e-58
AF273304-1|AAF98162.1| 422|Homo sapiens XPMC2 protein protein. 225 2e-58
BC000575-1|AAH00575.1| 353|Homo sapiens ISG20L2 protein protein. 151 4e-36
AL590666-6|CAI16341.1| 353|Homo sapiens interferon stimulated e... 151 4e-36
AK022733-1|BAB14212.1| 353|Homo sapiens protein ( Homo sapiens ... 151 4e-36
BC020988-1|AAH20988.1| 325|Homo sapiens interferon stimulated e... 136 1e-31
BC005164-1|AAH05164.1| 327|Homo sapiens ISG20L1 protein protein. 136 1e-31
AF327352-1|AAL56012.1| 325|Homo sapiens hypothetical protein SB... 136 1e-31
AL158826-19|CAI12848.1| 374|Homo sapiens REX4, RNA exonuclease ... 133 6e-31
AL158826-20|CAI12847.1| 233|Homo sapiens REX4, RNA exonuclease ... 130 6e-30
BC014407-1|AAH14407.1| 209|Homo sapiens ISG20L1 protein protein. 123 9e-28
AK022546-1|BAB14091.1| 209|Homo sapiens protein ( Homo sapiens ... 123 9e-28
X89773-1|CAA61915.2| 181|Homo sapiens isg20 protein. 116 1e-25
U88964-1|AAB53416.1| 181|Homo sapiens HEM45 protein. 116 1e-25
CR456942-1|CAG33223.1| 181|Homo sapiens ISG20 protein. 116 1e-25
BT006952-1|AAP35598.1| 181|Homo sapiens interferon stimulated g... 116 1e-25
BC007922-1|AAH07922.1| 181|Homo sapiens interferon stimulated e... 116 1e-25
BC016341-1|AAH16341.1| 87|Homo sapiens ISG20 protein protein. 72 2e-12
BC068503-1|AAH68503.1| 774|Homo sapiens LOC81691 protein protein. 72 3e-12
BC007646-1|AAH07646.1| 774|Homo sapiens exonuclease NEF-sp prot... 72 3e-12
AK057254-1|BAB71397.1| 443|Homo sapiens protein ( Homo sapiens ... 72 3e-12
AF332193-1|AAK17192.1| 774|Homo sapiens exonuclease NEF-sp prot... 72 3e-12
AB209323-1|BAD92560.1| 188|Homo sapiens hypothetical protein FL... 71 6e-12
AL158826-18|CAI12845.1| 189|Homo sapiens REX4, RNA exonuclease ... 69 2e-11
AC004381-4|AAC31668.1| 547|Homo sapiens Unknown gene product pr... 69 2e-11
BC032244-1|AAH32244.1| 1221|Homo sapiens REX1, RNA exonuclease 1... 68 4e-11
AB032964-1|BAA86452.1| 1239|Homo sapiens KIAA1138 protein protein. 68 4e-11
BC113453-1|AAI13454.2| 318|Homo sapiens REXO1L1 protein protein. 66 1e-10
BC112074-1|AAI12075.1| 347|Homo sapiens REXO1L2P protein protein. 66 1e-10
AF495523-1|AAN77012.1| 318|Homo sapiens exonuclease GOR protein. 66 1e-10
BC024043-1|AAH24043.1| 1198|Homo sapiens ubiquitin specific pept... 58 3e-08
AB107585-1|BAD02263.1| 1198|Homo sapiens PABP1-DEPENDENT POLY(A)... 58 3e-08
AB014610-1|BAA31685.2| 1206|Homo sapiens KIAA0710 protein protein. 58 3e-08
BC094885-1|AAH94885.1| 1202|Homo sapiens USP52 protein protein. 58 4e-08
AB209639-1|BAD92876.1| 189|Homo sapiens interferon stimulated g... 51 6e-06
AF023669-1|AAC98149.1| 170|Homo sapiens GOR antigen protein. 31 3.6
>BC009274-1|AAH09274.1| 422|Homo sapiens REX4, RNA exonuclease 4
homolog (S. cerevisiae) protein.
Length = 422
Score = 225 bits (549), Expect = 2e-58
Identities = 104/199 (52%), Positives = 143/199 (71%), Gaps = 1/199 (0%)
Frame = -3
Query: 720 ETLNLEPDQADGHEDDIALN-DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNK 544
E + Q E ++L+ ++QA +T+ +A+DCEMVG+G G + M ARVS+VN+
Sbjct: 211 EAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSIVNQ 270
Query: 543 FGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKN 364
+G C+YDK+VKP E V DYRT VSGIR E+L GE+ +VQKEVA++++G+ILVGH+L N
Sbjct: 271 YGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQGEELEVVQKEVAEMLKGRILVGHALHN 330
Query: 363 DLNVLFLSHPKRNIRDTSKYKPFKKITKGSTPSLKRLAKEILSIDIQHGEHSSVEDARAA 184
DL VLFL HPK+ IRDT KYKPFK K PSL+ L+++IL + +Q EH S++DA+AA
Sbjct: 331 DLKVLFLDHPKKKIRDTQKYKPFKSQVKSGRPSLRLLSEKILGLQVQQAEHCSIQDAQAA 390
Query: 183 MQLYRTVSKKWEAGLSDRR 127
M+LY V K+WE+ DRR
Sbjct: 391 MRLYVMVKKEWESMARDRR 409
>AL158826-21|CAI12849.1| 422|Homo sapiens REX4, RNA exonuclease 4
homolog (S. cerevisiae) protein.
Length = 422
Score = 225 bits (549), Expect = 2e-58
Identities = 104/199 (52%), Positives = 143/199 (71%), Gaps = 1/199 (0%)
Frame = -3
Query: 720 ETLNLEPDQADGHEDDIALN-DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNK 544
E + Q E ++L+ ++QA +T+ +A+DCEMVG+G G + M ARVS+VN+
Sbjct: 211 EAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSIVNQ 270
Query: 543 FGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKN 364
+G C+YDK+VKP E V DYRT VSGIR E+L GE+ +VQKEVA++++G+ILVGH+L N
Sbjct: 271 YGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQGEELEVVQKEVAEMLKGRILVGHALHN 330
Query: 363 DLNVLFLSHPKRNIRDTSKYKPFKKITKGSTPSLKRLAKEILSIDIQHGEHSSVEDARAA 184
DL VLFL HPK+ IRDT KYKPFK K PSL+ L+++IL + +Q EH S++DA+AA
Sbjct: 331 DLKVLFLDHPKKKIRDTQKYKPFKSQVKSGRPSLRLLSEKILGLQVQQAEHCSIQDAQAA 390
Query: 183 MQLYRTVSKKWEAGLSDRR 127
M+LY V K+WE+ DRR
Sbjct: 391 MRLYVMVKKEWESMARDRR 409
>AK025493-1|BAB15152.1| 422|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21840 fis, clone HEP01804. ).
Length = 422
Score = 225 bits (549), Expect = 2e-58
Identities = 104/199 (52%), Positives = 143/199 (71%), Gaps = 1/199 (0%)
Frame = -3
Query: 720 ETLNLEPDQADGHEDDIALN-DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNK 544
E + Q E ++L+ ++QA +T+ +A+DCEMVG+G G + M ARVS+VN+
Sbjct: 211 EAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSIVNQ 270
Query: 543 FGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKN 364
+G C+YDK+VKP E V DYRT VSGIR E+L GE+ +VQKEVA++++G+ILVGH+L N
Sbjct: 271 YGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQGEELEVVQKEVAEMLKGRILVGHALHN 330
Query: 363 DLNVLFLSHPKRNIRDTSKYKPFKKITKGSTPSLKRLAKEILSIDIQHGEHSSVEDARAA 184
DL VLFL HPK+ IRDT KYKPFK K PSL+ L+++IL + +Q EH S++DA+AA
Sbjct: 331 DLKVLFLDHPKKKIRDTQKYKPFKSQVKSGRPSLRLLSEKILGLQVQQAEHCSIQDAQAA 390
Query: 183 MQLYRTVSKKWEAGLSDRR 127
M+LY V K+WE+ DRR
Sbjct: 391 MRLYVMVKKEWESMARDRR 409
>AF295774-1|AAG02123.1| 422|Homo sapiens XPMC2H protein.
Length = 422
Score = 225 bits (549), Expect = 2e-58
Identities = 104/199 (52%), Positives = 143/199 (71%), Gaps = 1/199 (0%)
Frame = -3
Query: 720 ETLNLEPDQADGHEDDIALN-DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNK 544
E + Q E ++L+ ++QA +T+ +A+DCEMVG+G G + M ARVS+VN+
Sbjct: 211 EAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSIVNQ 270
Query: 543 FGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKN 364
+G C+YDK+VKP E V DYRT VSGIR E+L GE+ +VQKEVA++++G+ILVGH+L N
Sbjct: 271 YGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQGEELEVVQKEVAEMLKGRILVGHALHN 330
Query: 363 DLNVLFLSHPKRNIRDTSKYKPFKKITKGSTPSLKRLAKEILSIDIQHGEHSSVEDARAA 184
DL VLFL HPK+ IRDT KYKPFK K PSL+ L+++IL + +Q EH S++DA+AA
Sbjct: 331 DLKVLFLDHPKKKIRDTQKYKPFKSQVKSGRPSLRLLSEKILGLQVQQAEHCSIQDAQAA 390
Query: 183 MQLYRTVSKKWEAGLSDRR 127
M+LY V K+WE+ DRR
Sbjct: 391 MRLYVMVKKEWESMARDRR 409
>AF273304-1|AAF98162.1| 422|Homo sapiens XPMC2 protein protein.
Length = 422
Score = 225 bits (549), Expect = 2e-58
Identities = 104/199 (52%), Positives = 143/199 (71%), Gaps = 1/199 (0%)
Frame = -3
Query: 720 ETLNLEPDQADGHEDDIALN-DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNK 544
E + Q E ++L+ ++QA +T+ +A+DCEMVG+G G + M ARVS+VN+
Sbjct: 211 EAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSIVNQ 270
Query: 543 FGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKN 364
+G C+YDK+VKP E V DYRT VSGIR E+L GE+ +VQKEVA++++G+ILVGH+L N
Sbjct: 271 YGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQGEELEVVQKEVAEMLKGRILVGHALHN 330
Query: 363 DLNVLFLSHPKRNIRDTSKYKPFKKITKGSTPSLKRLAKEILSIDIQHGEHSSVEDARAA 184
DL VLFL HPK+ IRDT KYKPFK K PSL+ L+++IL + +Q EH S++DA+AA
Sbjct: 331 DLKVLFLDHPKKKIRDTQKYKPFKSQVKSGRPSLRLLSEKILGLQVQQAEHCSIQDAQAA 390
Query: 183 MQLYRTVSKKWEAGLSDRR 127
M+LY V K+WE+ DRR
Sbjct: 391 MRLYVMVKKEWESMARDRR 409
>BC000575-1|AAH00575.1| 353|Homo sapiens ISG20L2 protein protein.
Length = 353
Score = 151 bits (365), Expect = 4e-36
Identities = 84/219 (38%), Positives = 123/219 (56%), Gaps = 6/219 (2%)
Frame = -3
Query: 774 PEQKITKSKDXQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKIT-KFIAMDCEMVG 598
P + KS + + + N + H + N A K+ K +A+DCEMVG
Sbjct: 133 PTRSQKKSSQKKSSKKNHPQKNAPQNSTQAHSE----NKCSGASQKLPRKMVAIDCEMVG 188
Query: 597 IGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQK 418
G G+ LAR S+VN GD +YD+++ P + DYRT SGIRK+ ++N F I +
Sbjct: 189 TGPKGHVSSLARCSIVNYNGDVLYDEYILPPCHIVDYRTRWSGIRKQHMVNATPFKIARG 248
Query: 417 EVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPFKK---ITKGSTPSLKRLAK 247
++ ++ GKI+VGH++ ND L HPK RDTS P + + +T SLK L K
Sbjct: 249 QILKILTGKIVVGHAIHNDFKALQYFHPKSLTRDTSHIPPLNRKADCPENATMSLKHLTK 308
Query: 246 EILSIDIQHGE--HSSVEDARAAMQLYRTVSKKWEAGLS 136
++L+ DIQ G+ HSSVEDA+A M+LY+ V +WE L+
Sbjct: 309 KLLNRDIQVGKSGHSSVEDAQATMELYKLVEVEWEEHLA 347
>AL590666-6|CAI16341.1| 353|Homo sapiens interferon stimulated
exonuclease gene 20kDa-liker), member 1 (antiporter,
Na+/ protein.
Length = 353
Score = 151 bits (365), Expect = 4e-36
Identities = 84/219 (38%), Positives = 123/219 (56%), Gaps = 6/219 (2%)
Frame = -3
Query: 774 PEQKITKSKDXQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKIT-KFIAMDCEMVG 598
P + KS + + + N + H + N A K+ K +A+DCEMVG
Sbjct: 133 PTRSQKKSSQKKSSKKNHPQKNAPQNSTQAHSE----NKCSGASQKLPRKMVAIDCEMVG 188
Query: 597 IGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQK 418
G G+ LAR S+VN GD +YD+++ P + DYRT SGIRK+ ++N F I +
Sbjct: 189 TGPKGHVSSLARCSIVNYNGDVLYDEYILPPCHIVDYRTRWSGIRKQHMVNATPFKIARG 248
Query: 417 EVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPFKK---ITKGSTPSLKRLAK 247
++ ++ GKI+VGH++ ND L HPK RDTS P + + +T SLK L K
Sbjct: 249 QILKILTGKIVVGHAIHNDFKALQYFHPKSLTRDTSHIPPLNRKADCPENATMSLKHLTK 308
Query: 246 EILSIDIQHGE--HSSVEDARAAMQLYRTVSKKWEAGLS 136
++L+ DIQ G+ HSSVEDA+A M+LY+ V +WE L+
Sbjct: 309 KLLNRDIQVGKSGHSSVEDAQATMELYKLVEVEWEEHLA 347
>AK022733-1|BAB14212.1| 353|Homo sapiens protein ( Homo sapiens
cDNA FLJ12671 fis, clone NT2RM4002323, weakly similar to
ANTIGEN GOR. ).
Length = 353
Score = 151 bits (365), Expect = 4e-36
Identities = 84/219 (38%), Positives = 123/219 (56%), Gaps = 6/219 (2%)
Frame = -3
Query: 774 PEQKITKSKDXQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKIT-KFIAMDCEMVG 598
P + KS + + + N + H + N A K+ K +A+DCEMVG
Sbjct: 133 PTRSQKKSSQKKSSKKNHPQKNAPQNSTQAHSE----NKCSGASQKLPRKMVAIDCEMVG 188
Query: 597 IGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQK 418
G G+ LAR S+VN GD +YD+++ P + DYRT SGIRK+ ++N F I +
Sbjct: 189 TGPKGHVSSLARCSIVNYNGDVLYDEYILPPCHIVDYRTRWSGIRKQHMVNATPFKIARG 248
Query: 417 EVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPFKK---ITKGSTPSLKRLAK 247
++ ++ GKI+VGH++ ND L HPK RDTS P + + +T SLK L K
Sbjct: 249 QILKILTGKIVVGHAIHNDFKALQYFHPKSLTRDTSHIPPLNRKADCPENATMSLKHLTK 308
Query: 246 EILSIDIQHGE--HSSVEDARAAMQLYRTVSKKWEAGLS 136
++L+ DIQ G+ HSSVEDA+A M+LY+ V +WE L+
Sbjct: 309 KLLNRDIQVGKSGHSSVEDAQATMELYKLVEVEWEEHLA 347
>BC020988-1|AAH20988.1| 325|Homo sapiens interferon stimulated
exonuclease gene 20kDa-like 1 protein.
Length = 325
Score = 136 bits (328), Expect = 1e-31
Identities = 71/167 (42%), Positives = 101/167 (60%), Gaps = 5/167 (2%)
Frame = -3
Query: 633 TKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKED 454
+K +A+DCEMVG G G LAR S+V+ GD +YDK+++P + DYRT SGI ++
Sbjct: 108 SKCVAIDCEMVGTGPRGRVSELARCSIVSYHGDVLYDKYIRPEMPIADYRTRWSGITRQH 167
Query: 453 LINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPFKK---IT 283
+ F + QKE+ +++GK++VGH+L ND L HP+ RDT+ F +
Sbjct: 168 MRKAVPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPRSQTRDTTYVPNFLSEPGLH 227
Query: 282 KGSTPSLKRLAKEILSIDIQHGE--HSSVEDARAAMQLYRTVSKKWE 148
+ SLK LA ++L IQ G+ HSSVEDA AM+LYR V +WE
Sbjct: 228 TRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLVEVQWE 274
>BC005164-1|AAH05164.1| 327|Homo sapiens ISG20L1 protein protein.
Length = 327
Score = 136 bits (328), Expect = 1e-31
Identities = 71/167 (42%), Positives = 101/167 (60%), Gaps = 5/167 (2%)
Frame = -3
Query: 633 TKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKED 454
+K +A+DCEMVG G G LAR S+V+ GD +YDK+++P + DYRT SGI ++
Sbjct: 108 SKCVAIDCEMVGTGPRGRVSELARCSIVSYHGDVLYDKYIRPEMPIADYRTRWSGITRQH 167
Query: 453 LINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPFKK---IT 283
+ F + QKE+ +++GK++VGH+L ND L HP+ RDT+ F +
Sbjct: 168 MRKAVPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPRSQTRDTTYVPNFLSEPGLH 227
Query: 282 KGSTPSLKRLAKEILSIDIQHGE--HSSVEDARAAMQLYRTVSKKWE 148
+ SLK LA ++L IQ G+ HSSVEDA AM+LYR V +WE
Sbjct: 228 TRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLVEVQWE 274
>AF327352-1|AAL56012.1| 325|Homo sapiens hypothetical protein
SBBI58 protein.
Length = 325
Score = 136 bits (328), Expect = 1e-31
Identities = 71/167 (42%), Positives = 101/167 (60%), Gaps = 5/167 (2%)
Frame = -3
Query: 633 TKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKED 454
+K +A+DCEMVG G G LAR S+V+ GD +YDK+++P + DYRT SGI ++
Sbjct: 108 SKCVAIDCEMVGTGPRGRVSELARCSIVSYHGDVLYDKYIRPEMPIADYRTRWSGITRQH 167
Query: 453 LINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPFKK---IT 283
+ F + QKE+ +++GK++VGH+L ND L HP+ RDT+ F +
Sbjct: 168 MRKAVPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPRSQTRDTTYVPNFLSEPGLH 227
Query: 282 KGSTPSLKRLAKEILSIDIQHGE--HSSVEDARAAMQLYRTVSKKWE 148
+ SLK LA ++L IQ G+ HSSVEDA AM+LYR V +WE
Sbjct: 228 TRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLVEVQWE 274
>AL158826-19|CAI12848.1| 374|Homo sapiens REX4, RNA exonuclease 4
homolog (S. cerevisiae) protein.
Length = 374
Score = 133 bits (322), Expect = 6e-31
Identities = 62/122 (50%), Positives = 88/122 (72%), Gaps = 1/122 (0%)
Frame = -3
Query: 720 ETLNLEPDQADGHEDDIALN-DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNK 544
E + Q E ++L+ ++QA +T+ +A+DCEMVG+G G + M ARVS+VN+
Sbjct: 196 EAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSIVNQ 255
Query: 543 FGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKN 364
+G C+YDK+VKP E V DYRT VSGIR E+L GE+ +VQKEVA++++G+ILVGH+L N
Sbjct: 256 YGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQGEELEVVQKEVAEMLKGRILVGHALHN 315
Query: 363 DL 358
DL
Sbjct: 316 DL 317
>AL158826-20|CAI12847.1| 233|Homo sapiens REX4, RNA exonuclease 4
homolog (S. cerevisiae) protein.
Length = 233
Score = 130 bits (314), Expect = 6e-30
Identities = 56/99 (56%), Positives = 77/99 (77%)
Frame = -3
Query: 441 EDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPFKKITKGSTPSL 262
E+ +VQKEVA++++G+ILVGH+L NDL VLFL HPK+ IRDT KYKPFK K PSL
Sbjct: 133 EELEVVQKEVAEMLKGRILVGHALHNDLKVLFLDHPKKKIRDTQKYKPFKSQVKSGRPSL 192
Query: 261 KRLAKEILSIDIQHGEHSSVEDARAAMQLYRTVSKKWEA 145
+ L+++IL + +Q EH S++DA+AAM+LY V K+WE+
Sbjct: 193 RLLSEKILGLQVQQAEHCSIQDAQAAMRLYVMVKKEWES 231
>BC014407-1|AAH14407.1| 209|Homo sapiens ISG20L1 protein protein.
Length = 209
Score = 123 bits (296), Expect = 9e-28
Identities = 66/158 (41%), Positives = 93/158 (58%), Gaps = 5/158 (3%)
Frame = -3
Query: 606 MVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSI 427
MVG G G LAR S+V+ GD +YDK+++P + DYRT SGI ++ + F +
Sbjct: 1 MVGTGPRGRVSELARCSIVSYHGDVLYDKYIRPEMPIADYRTRWSGITRQHMRKAVPFQV 60
Query: 426 VQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPFKK---ITKGSTPSLKR 256
QKE+ +++GK++VGH+L ND L HP+ RDT+ F + + SLK
Sbjct: 61 AQKEILKLLKGKVVVGHALHNDFQALKYVHPRSQTRDTTYVPNFLSEPGLHTRARVSLKD 120
Query: 255 LAKEILSIDIQHGE--HSSVEDARAAMQLYRTVSKKWE 148
LA ++L IQ G+ HSSVEDA AM+LYR V +WE
Sbjct: 121 LALQLLHKKIQVGQHGHSSVEDATTAMELYRLVEVQWE 158
>AK022546-1|BAB14091.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ12484 fis, clone NT2RM1001102, weakly similar to
Human HEM45 mRNA. ).
Length = 209
Score = 123 bits (296), Expect = 9e-28
Identities = 66/158 (41%), Positives = 93/158 (58%), Gaps = 5/158 (3%)
Frame = -3
Query: 606 MVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSI 427
MVG G G LAR S+V+ GD +YDK+++P + DYRT SGI ++ + F +
Sbjct: 1 MVGTGPRGRVSELARCSIVSYHGDVLYDKYIRPEMPIADYRTRWSGITRQHMRKAVPFQV 60
Query: 426 VQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPFKK---ITKGSTPSLKR 256
QKE+ +++GK++VGH+L ND L HP+ RDT+ F + + SLK
Sbjct: 61 AQKEILKLLKGKVVVGHALHNDFQALKYVHPRSQTRDTTYVPNFLSEPGLHTRARVSLKD 120
Query: 255 LAKEILSIDIQHGE--HSSVEDARAAMQLYRTVSKKWE 148
LA ++L IQ G+ HSSVEDA AM+LYR V +WE
Sbjct: 121 LALQLLHKKIQVGQHGHSSVEDATTAMELYRLVEVQWE 158
>X89773-1|CAA61915.2| 181|Homo sapiens isg20 protein.
Length = 181
Score = 116 bits (279), Expect = 1e-25
Identities = 69/176 (39%), Positives = 104/176 (59%), Gaps = 5/176 (2%)
Frame = -3
Query: 624 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN 445
+AMDCEMVG+G + LAR SLVN G +YDKF++P E+ DYRT VSG+ + ++
Sbjct: 8 VAMDCEMVGLG-PHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVG 66
Query: 444 GEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPF---KKITKGS 274
F++ + E+ +++GK++VGH LK+D L I DTS + K+
Sbjct: 67 ATPFAVARLEILQLLKGKLVVGHDLKHDFQALKEDMSGYTIYDTSTDRLLWREAKLDHCR 126
Query: 273 TPSLKRLAKEILSIDIQHG--EHSSVEDARAAMQLYRTVSKKWEAGLSDRRGYKKI 112
SL+ L++ +L IQ+ HSSVEDARA M+LY+ +S++ A RRG ++
Sbjct: 127 RVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELYQ-ISQRIRA----RRGLPRL 177
>U88964-1|AAB53416.1| 181|Homo sapiens HEM45 protein.
Length = 181
Score = 116 bits (279), Expect = 1e-25
Identities = 69/176 (39%), Positives = 104/176 (59%), Gaps = 5/176 (2%)
Frame = -3
Query: 624 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN 445
+AMDCEMVG+G + LAR SLVN G +YDKF++P E+ DYRT VSG+ + ++
Sbjct: 8 VAMDCEMVGLG-PHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVG 66
Query: 444 GEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPF---KKITKGS 274
F++ + E+ +++GK++VGH LK+D L I DTS + K+
Sbjct: 67 ATPFAVARLEILQLLKGKLVVGHDLKHDFQALKEDMSGYTIYDTSTDRLLWREAKLDHCR 126
Query: 273 TPSLKRLAKEILSIDIQHG--EHSSVEDARAAMQLYRTVSKKWEAGLSDRRGYKKI 112
SL+ L++ +L IQ+ HSSVEDARA M+LY+ +S++ A RRG ++
Sbjct: 127 RVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELYQ-ISQRIRA----RRGLPRL 177
>CR456942-1|CAG33223.1| 181|Homo sapiens ISG20 protein.
Length = 181
Score = 116 bits (279), Expect = 1e-25
Identities = 69/176 (39%), Positives = 104/176 (59%), Gaps = 5/176 (2%)
Frame = -3
Query: 624 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN 445
+AMDCEMVG+G + LAR SLVN G +YDKF++P E+ DYRT VSG+ + ++
Sbjct: 8 VAMDCEMVGLG-PHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVG 66
Query: 444 GEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPF---KKITKGS 274
F++ + E+ +++GK++VGH LK+D L I DTS + K+
Sbjct: 67 ATPFAVARLEILQLLKGKLVVGHDLKHDFQALKEDMSGYTIYDTSTDRLLWREAKLDHCR 126
Query: 273 TPSLKRLAKEILSIDIQHG--EHSSVEDARAAMQLYRTVSKKWEAGLSDRRGYKKI 112
SL+ L++ +L IQ+ HSSVEDARA M+LY+ +S++ A RRG ++
Sbjct: 127 RVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELYQ-ISQRIRA----RRGLPRL 177
>BT006952-1|AAP35598.1| 181|Homo sapiens interferon stimulated gene
20kDa protein.
Length = 181
Score = 116 bits (279), Expect = 1e-25
Identities = 69/176 (39%), Positives = 104/176 (59%), Gaps = 5/176 (2%)
Frame = -3
Query: 624 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN 445
+AMDCEMVG+G + LAR SLVN G +YDKF++P E+ DYRT VSG+ + ++
Sbjct: 8 VAMDCEMVGLG-PHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVG 66
Query: 444 GEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPF---KKITKGS 274
F++ + E+ +++GK++VGH LK+D L I DTS + K+
Sbjct: 67 ATPFAVARLEILQLLKGKLVVGHDLKHDFQALKEDMSGYTIYDTSTDRLLWREAKLDHCR 126
Query: 273 TPSLKRLAKEILSIDIQHG--EHSSVEDARAAMQLYRTVSKKWEAGLSDRRGYKKI 112
SL+ L++ +L IQ+ HSSVEDARA M+LY+ +S++ A RRG ++
Sbjct: 127 RVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELYQ-ISQRIRA----RRGLPRL 177
>BC007922-1|AAH07922.1| 181|Homo sapiens interferon stimulated
exonuclease gene 20kDa protein.
Length = 181
Score = 116 bits (279), Expect = 1e-25
Identities = 69/176 (39%), Positives = 104/176 (59%), Gaps = 5/176 (2%)
Frame = -3
Query: 624 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN 445
+AMDCEMVG+G + LAR SLVN G +YDKF++P E+ DYRT VSG+ + ++
Sbjct: 8 VAMDCEMVGLG-PHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVG 66
Query: 444 GEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPF---KKITKGS 274
F++ + E+ +++GK++VGH LK+D L I DTS + K+
Sbjct: 67 ATPFAVARLEILQLLKGKLVVGHDLKHDFQALKEDMSGYTIYDTSTDRLLWREAKLDHCR 126
Query: 273 TPSLKRLAKEILSIDIQHG--EHSSVEDARAAMQLYRTVSKKWEAGLSDRRGYKKI 112
SL+ L++ +L IQ+ HSSVEDARA M+LY+ +S++ A RRG ++
Sbjct: 127 RVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELYQ-ISQRIRA----RRGLPRL 177
>BC016341-1|AAH16341.1| 87|Homo sapiens ISG20 protein protein.
Length = 87
Score = 72.1 bits (169), Expect = 2e-12
Identities = 33/71 (46%), Positives = 47/71 (66%)
Frame = -3
Query: 624 IAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLIN 445
+AMDCEMVG+G + LAR SLVN G +YDKF++P E+ DYRT VSG+ + ++
Sbjct: 8 VAMDCEMVGLG-PHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVG 66
Query: 444 GEDFSIVQKEV 412
F++ + EV
Sbjct: 67 ATPFAVARLEV 77
>BC068503-1|AAH68503.1| 774|Homo sapiens LOC81691 protein protein.
Length = 774
Score = 71.7 bits (168), Expect = 3e-12
Identities = 58/156 (37%), Positives = 85/156 (54%), Gaps = 6/156 (3%)
Frame = -3
Query: 618 MDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGE 439
+DCEM + G + L R+SLV + G C+ D+ VKP ++ DY T SGI K+ ++N
Sbjct: 231 LDCEMC-LTSKGRE--LTRISLVAEGGCCVMDELVKPENKILDYLTSFSGITKK-ILNPV 286
Query: 438 DFSI--VQKEVADVI-RGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPFKKITKGSTP 268
+ VQ+++ ++ +LVGHSL DL L + HP + DTS + +G
Sbjct: 287 TTKLKDVQRQLKALLPPDAVLVGHSLDLDLRALKMIHP--YVIDTSLLYVRE---QGRRF 341
Query: 267 SLKRLAKEILSIDIQHGE---HSSVEDARAAMQLYR 169
LK LAK IL DIQ + H + EDAR ++L R
Sbjct: 342 KLKFLAKVILGKDIQCPDRLGHDATEDARTILELAR 377
>BC007646-1|AAH07646.1| 774|Homo sapiens exonuclease NEF-sp
protein.
Length = 774
Score = 71.7 bits (168), Expect = 3e-12
Identities = 58/156 (37%), Positives = 85/156 (54%), Gaps = 6/156 (3%)
Frame = -3
Query: 618 MDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGE 439
+DCEM + G + L R+SLV + G C+ D+ VKP ++ DY T SGI K+ ++N
Sbjct: 231 LDCEMC-LTSKGRE--LTRISLVAEGGCCVMDELVKPENKILDYLTSFSGITKK-ILNPV 286
Query: 438 DFSI--VQKEVADVI-RGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPFKKITKGSTP 268
+ VQ+++ ++ +LVGHSL DL L + HP + DTS + +G
Sbjct: 287 TTKLKDVQRQLKALLPPDAVLVGHSLDLDLRALKMIHP--YVIDTSLLYVRE---QGRRF 341
Query: 267 SLKRLAKEILSIDIQHGE---HSSVEDARAAMQLYR 169
LK LAK IL DIQ + H + EDAR ++L R
Sbjct: 342 KLKFLAKVILGKDIQCPDRLGHDATEDARTILELAR 377
>AK057254-1|BAB71397.1| 443|Homo sapiens protein ( Homo sapiens
cDNA FLJ32692 fis, clone TESTI2000238. ).
Length = 443
Score = 71.7 bits (168), Expect = 3e-12
Identities = 58/156 (37%), Positives = 85/156 (54%), Gaps = 6/156 (3%)
Frame = -3
Query: 618 MDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGE 439
+DCEM + G + L R+SLV + G C+ D+ VKP ++ DY T SGI K+ ++N
Sbjct: 231 LDCEMC-LTSKGRE--LTRISLVAEGGCCVMDELVKPENKILDYLTSFSGITKK-ILNPV 286
Query: 438 DFSI--VQKEVADVI-RGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPFKKITKGSTP 268
+ VQ+++ ++ +LVGHSL DL L + HP + DTS + +G
Sbjct: 287 TTKLKDVQRQLKALLPPDAVLVGHSLDLDLRALKMIHP--YVIDTSLLYVRE---QGRRF 341
Query: 267 SLKRLAKEILSIDIQHGE---HSSVEDARAAMQLYR 169
LK LAK IL DIQ + H + EDAR ++L R
Sbjct: 342 KLKFLAKVILGKDIQCPDRLGHDATEDARTILELAR 377
>AF332193-1|AAK17192.1| 774|Homo sapiens exonuclease NEF-sp
protein.
Length = 774
Score = 71.7 bits (168), Expect = 3e-12
Identities = 58/156 (37%), Positives = 85/156 (54%), Gaps = 6/156 (3%)
Frame = -3
Query: 618 MDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGE 439
+DCEM + G + L R+SLV + G C+ D+ VKP ++ DY T SGI K+ ++N
Sbjct: 231 LDCEMC-LTSKGRE--LTRISLVAEGGCCVMDELVKPENKILDYLTSFSGITKK-ILNPV 286
Query: 438 DFSI--VQKEVADVI-RGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPFKKITKGSTP 268
+ VQ+++ ++ +LVGHSL DL L + HP + DTS + +G
Sbjct: 287 TTKLKDVQRQLKALLPPDAVLVGHSLDLDLRALKMIHP--YVIDTSLLYVRE---QGRRF 341
Query: 267 SLKRLAKEILSIDIQHGE---HSSVEDARAAMQLYR 169
LK LAK IL DIQ + H + EDAR ++L R
Sbjct: 342 KLKFLAKVILGKDIQCPDRLGHDATEDARTILELAR 377
>AB209323-1|BAD92560.1| 188|Homo sapiens hypothetical protein
FLJ12484 variant protein.
Length = 188
Score = 70.5 bits (165), Expect = 6e-12
Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Frame = -3
Query: 417 EVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPFKK---ITKGSTPSLKRLAK 247
++ +++GK++VGH+L ND L HP+ RDT+ F + + SLK LA
Sbjct: 43 QILKLLKGKVVVGHALHNDFQALKYVHPRSQTRDTTYVPNFLSEPGLHTRARVSLKDLAL 102
Query: 246 EILSIDIQHGE--HSSVEDARAAMQLYRTVSKKWE 148
++L IQ G+ HSSVEDA AM+LYR V +WE
Sbjct: 103 QLLHKKIQVGQHGHSSVEDATTAMELYRLVEVQWE 137
>AL158826-18|CAI12845.1| 189|Homo sapiens REX4, RNA exonuclease 4
homolog (S. cerevisiae) protein.
Length = 189
Score = 68.9 bits (161), Expect = 2e-11
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = -3
Query: 720 ETLNLEPDQADGHEDDIALN-DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNK 544
E + Q E ++L+ ++QA +T+ +A+DCEMVG+G G + M ARVS+VN+
Sbjct: 118 EAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSIVNQ 177
Query: 543 FGDCIYDKFVKP 508
+G C+YDK+VKP
Sbjct: 178 YGKCVYDKYVKP 189
>AC004381-4|AAC31668.1| 547|Homo sapiens Unknown gene product
protein.
Length = 547
Score = 68.9 bits (161), Expect = 2e-11
Identities = 53/140 (37%), Positives = 77/140 (55%), Gaps = 6/140 (4%)
Frame = -3
Query: 570 LARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSI--VQKEVADVI- 400
L R+SLV + G C+ D+ VKP ++ DY T SGI K+ ++N + VQ+++ ++
Sbjct: 155 LTRISLVAEGGCCVMDELVKPENKILDYLTSFSGITKK-ILNPVTTKLKDVQRQLKALLP 213
Query: 399 RGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPFKKITKGSTPSLKRLAKEILSIDIQH 220
+LVGHSL DL L + HP + DTS + +G LK LAK IL DIQ
Sbjct: 214 PDAVLVGHSLDLDLRALKMIHP--YVIDTSLLYVRE---QGRRFKLKFLAKVILGKDIQC 268
Query: 219 GE---HSSVEDARAAMQLYR 169
+ H + EDAR ++L R
Sbjct: 269 PDRLGHDATEDARTILELAR 288
>BC032244-1|AAH32244.1| 1221|Homo sapiens REX1, RNA exonuclease 1
homolog (S. cerevisiae) protein.
Length = 1221
Score = 67.7 bits (158), Expect = 4e-11
Identities = 57/156 (36%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Frame = -3
Query: 621 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 442
A+DCEM Y L RV++V+ +YD FVKP E+ DY T SG+ + DL
Sbjct: 1062 ALDCEM---SYTTYGLELTRVTVVDTDVHVVYDTFVKPDNEIVDYNTRFSGVTEADL--- 1115
Query: 441 EDFSIVQKEVADVI-----RGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPFKKITKG 277
D S+ ++V V+ IL+GHSL++DL L + H + DTS P ++
Sbjct: 1116 ADTSVTLRDVQAVLLSMFSADTILIGHSLESDLLALKVIH--STVVDTSVLFP-HRLGLP 1172
Query: 276 STPSLKRLAKEILSIDIQHG--EHSSVEDARAAMQL 175
SL+ L + L IQ HSS EDA A M L
Sbjct: 1173 YKRSLRNLMADYLRQIIQDNVDGHSSSEDAGACMHL 1208
>AB032964-1|BAA86452.1| 1239|Homo sapiens KIAA1138 protein protein.
Length = 1239
Score = 67.7 bits (158), Expect = 4e-11
Identities = 57/156 (36%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Frame = -3
Query: 621 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 442
A+DCEM Y L RV++V+ +YD FVKP E+ DY T SG+ + DL
Sbjct: 1080 ALDCEM---SYTTYGLELTRVTVVDTDVHVVYDTFVKPDNEIVDYNTRFSGVTEADL--- 1133
Query: 441 EDFSIVQKEVADVI-----RGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPFKKITKG 277
D S+ ++V V+ IL+GHSL++DL L + H + DTS P ++
Sbjct: 1134 ADTSVTLRDVQAVLLSMFSADTILIGHSLESDLLALKVIH--STVVDTSVLFP-HRLGLP 1190
Query: 276 STPSLKRLAKEILSIDIQHG--EHSSVEDARAAMQL 175
SL+ L + L IQ HSS EDA A M L
Sbjct: 1191 YKRSLRNLMADYLRQIIQDNVDGHSSSEDAGACMHL 1226
>BC113453-1|AAI13454.2| 318|Homo sapiens REXO1L1 protein protein.
Length = 318
Score = 66.5 bits (155), Expect = 1e-10
Identities = 54/153 (35%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Frame = -3
Query: 621 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 442
A+DCEM Y + L RV++V+ +YD FVKP E+ DY T SG+ + D+
Sbjct: 146 ALDCEMC---YTTHGLELTRVTVVDADMRVVYDTFVKPDNEIVDYNTRFSGVTEADVAKT 202
Query: 441 E-DFSIVQKEVADVIRGK-ILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPFKKITKGSTP 268
VQ + + IL+GHSL++DL L L H + DT+ P +
Sbjct: 203 SITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIH--STVVDTAVLFP-HYLGFPYKR 259
Query: 267 SLKRLAKEILSIDIQHGE--HSSVEDARAAMQL 175
SL+ LA + L+ IQ + H+S EDA A +QL
Sbjct: 260 SLRNLAADYLAQIIQDSQDGHNSSEDANACLQL 292
>BC112074-1|AAI12075.1| 347|Homo sapiens REXO1L2P protein protein.
Length = 347
Score = 66.5 bits (155), Expect = 1e-10
Identities = 54/153 (35%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Frame = -3
Query: 621 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 442
A+DCEM Y + L RV++V+ +YD FVKP E+ DY T SG+ + D+
Sbjct: 175 ALDCEMC---YTTHGLELTRVTVVDADMRVVYDTFVKPDNEIVDYNTRFSGVTEADVAKT 231
Query: 441 E-DFSIVQKEVADVIRGK-ILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPFKKITKGSTP 268
VQ + + IL+GHSL++DL L L H + DT+ P +
Sbjct: 232 SITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIH--STVVDTAVLFP-HYLGFPYKR 288
Query: 267 SLKRLAKEILSIDIQHGE--HSSVEDARAAMQL 175
SL+ LA + L+ IQ + H+S EDA A +QL
Sbjct: 289 SLRNLAADYLAQIIQDSQDGHNSSEDANACLQL 321
>AF495523-1|AAN77012.1| 318|Homo sapiens exonuclease GOR protein.
Length = 318
Score = 66.5 bits (155), Expect = 1e-10
Identities = 54/153 (35%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Frame = -3
Query: 621 AMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLING 442
A+DCEM Y + L RV++V+ +YD FVKP E+ DY T SG+ + D+
Sbjct: 146 ALDCEMC---YTTHGLELTRVTVVDADMRVVYDTFVKPDNEIVDYNTRFSGVTEADVAKT 202
Query: 441 E-DFSIVQKEVADVIRGK-ILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPFKKITKGSTP 268
VQ + + IL+GHSL++DL L L H + DT+ P +
Sbjct: 203 SITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIH--STVVDTAVLFP-HYLGFPYKR 259
Query: 267 SLKRLAKEILSIDIQHGE--HSSVEDARAAMQL 175
SL+ LA + L+ IQ + H+S EDA A +QL
Sbjct: 260 SLRNLAADYLAQIIQDSQNGHNSSEDANACLQL 292
>BC024043-1|AAH24043.1| 1198|Homo sapiens ubiquitin specific peptidase
52 protein.
Length = 1198
Score = 58.4 bits (135), Expect = 3e-08
Identities = 44/128 (34%), Positives = 65/128 (50%), Gaps = 9/128 (7%)
Frame = -3
Query: 525 DKFVKPREEVKDYRTIVSGIRKEDL---INGEDFSIVQKEVAD----VIRGKILVGHSLK 367
D ++ +E+V DY T SGI+ DL I+ + + ++ + G VGH L+
Sbjct: 1022 DDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQ 1081
Query: 366 NDLNVLFLSHPKRNIRDTSK--YKPFKKITKGSTPSLKRLAKEILSIDIQHGEHSSVEDA 193
D V+ L PK + DT + P K++ SL+ LA L + IQ H S+EDA
Sbjct: 1082 KDFRVINLMVPKDQVLDTVYLFHMPRKRMI-----SLRFLAWYFLDLKIQGETHDSIEDA 1136
Query: 192 RAAMQLYR 169
R A+QLYR
Sbjct: 1137 RTALQLYR 1144
>AB107585-1|BAD02263.1| 1198|Homo sapiens PABP1-DEPENDENT
POLY(A)-SPECIFIC RIBONUCLEASE SUBUNIT PAN2 protein.
Length = 1198
Score = 58.4 bits (135), Expect = 3e-08
Identities = 44/128 (34%), Positives = 65/128 (50%), Gaps = 9/128 (7%)
Frame = -3
Query: 525 DKFVKPREEVKDYRTIVSGIRKEDL---INGEDFSIVQKEVAD----VIRGKILVGHSLK 367
D ++ +E+V DY T SGI+ DL I+ + + ++ + G VGH L+
Sbjct: 1022 DDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQ 1081
Query: 366 NDLNVLFLSHPKRNIRDTSK--YKPFKKITKGSTPSLKRLAKEILSIDIQHGEHSSVEDA 193
D V+ L PK + DT + P K++ SL+ LA L + IQ H S+EDA
Sbjct: 1082 KDFRVINLMVPKDQVLDTVYLFHMPRKRMI-----SLRFLAWYFLDLKIQGETHDSIEDA 1136
Query: 192 RAAMQLYR 169
R A+QLYR
Sbjct: 1137 RTALQLYR 1144
>AB014610-1|BAA31685.2| 1206|Homo sapiens KIAA0710 protein protein.
Length = 1206
Score = 58.4 bits (135), Expect = 3e-08
Identities = 44/128 (34%), Positives = 65/128 (50%), Gaps = 9/128 (7%)
Frame = -3
Query: 525 DKFVKPREEVKDYRTIVSGIRKEDL---INGEDFSIVQKEVAD----VIRGKILVGHSLK 367
D ++ +E+V DY T SGI+ DL I+ + + ++ + G VGH L+
Sbjct: 1030 DDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQ 1089
Query: 366 NDLNVLFLSHPKRNIRDTSK--YKPFKKITKGSTPSLKRLAKEILSIDIQHGEHSSVEDA 193
D V+ L PK + DT + P K++ SL+ LA L + IQ H S+EDA
Sbjct: 1090 KDFRVINLMVPKDQVLDTVYLFHMPRKRMI-----SLRFLAWYFLDLKIQGETHDSIEDA 1144
Query: 192 RAAMQLYR 169
R A+QLYR
Sbjct: 1145 RTALQLYR 1152
>BC094885-1|AAH94885.1| 1202|Homo sapiens USP52 protein protein.
Length = 1202
Score = 58.0 bits (134), Expect = 4e-08
Identities = 44/128 (34%), Positives = 65/128 (50%), Gaps = 9/128 (7%)
Frame = -3
Query: 525 DKFVKPREEVKDYRTIVSGIRKEDL---INGEDFSIVQKEVAD----VIRGKILVGHSLK 367
D ++ +E+V DY T SGI+ DL I+ + + ++ + G VGH L+
Sbjct: 1026 DDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQ 1085
Query: 366 NDLNVLFLSHPKRNIRDTSK--YKPFKKITKGSTPSLKRLAKEILSIDIQHGEHSSVEDA 193
D V+ L PK + DT + P K++ SL+ LA L + IQ H S+EDA
Sbjct: 1086 KDFRVVNLMVPKDQVLDTVYLFHMPRKRMI-----SLRFLAWYFLDLKIQGETHDSIEDA 1140
Query: 192 RAAMQLYR 169
R A+QLYR
Sbjct: 1141 RTALQLYR 1148
>AB209639-1|BAD92876.1| 189|Homo sapiens interferon stimulated gene
20kDa variant protein.
Length = 189
Score = 50.8 bits (116), Expect = 6e-06
Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 5/107 (4%)
Frame = -3
Query: 417 EVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPF---KKITKGSTPSLKRLAK 247
++ +++GK++VGH LK+D L I DTS + K+ SL+ L++
Sbjct: 84 QILQLLKGKLVVGHDLKHDFQALKEDMSGYTIYDTSTDRLLWREAKLDHCRRVSLRVLSE 143
Query: 246 EILSIDIQHG--EHSSVEDARAAMQLYRTVSKKWEAGLSDRRGYKKI 112
+L IQ+ HSSVEDARA M+LY+ +S++ A RRG ++
Sbjct: 144 RLLHKSIQNSLLGHSSVEDARATMELYQ-ISQRIRA----RRGLPRL 185
>AF023669-1|AAC98149.1| 170|Homo sapiens GOR antigen protein.
Length = 170
Score = 31.5 bits (68), Expect = 3.6
Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 4/123 (3%)
Frame = -3
Query: 531 IYDKFVKPREEVKDYRTIVSGIRKEDLINGED-FSIVQKEVADVIRGK-ILVGHSLKNDL 358
+YD VKP E+ DY T + + D+ VQ + + I GHS++ DL
Sbjct: 42 VYDTXVKPDNEIVDYNTRFFXVTEADVAKXSXRLPQVQAIXLXFLSAQTIXXGHSVEXDL 101
Query: 357 NVLFLSHPKRNIRDTSKYKPFKKITKGSTPSLKRLAKEILSIDIQHGE--HSSVEDARAA 184
L L + DT+ P + + SL+ A + L+ Q + H S E A A
Sbjct: 102 MALKLI--XSTVVDTAVLFP-QYMGFPYKRSLRXXAADXLAQIXQDSQDGHXSSEXANAC 158
Query: 183 MQL 175
+Q+
Sbjct: 159 LQM 161
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,582,052
Number of Sequences: 237096
Number of extensions: 1999398
Number of successful extensions: 4309
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 4164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4266
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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