Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt18d06
         (784 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98091-1|CAA66717.1|  145|Homo sapiens vitamin D inducible prote...    32   2.0  
U62136-1|AAB04758.2|  145|Homo sapiens enterocyte differentiatio...    32   2.0  
DQ003720-1|AAY16979.1|  145|Homo sapiens ubiquitin-conjugating e...    32   2.0  
CR407628-1|CAG28556.1|  145|Homo sapiens UBE2V2 protein.               32   2.0  
BT006744-1|AAP35390.1|  145|Homo sapiens ubiquitin-conjugating e...    32   2.0  
BC062418-1|AAH62418.1|  145|Homo sapiens ubiquitin-conjugating e...    32   2.0  
BC028673-1|AAH28673.1|  145|Homo sapiens ubiquitin-conjugating e...    32   2.0  
BC016710-1|AAH16710.1|  145|Homo sapiens ubiquitin-conjugating e...    32   2.0  
BC016332-1|AAH16332.1|  145|Homo sapiens ubiquitin-conjugating e...    32   2.0  
BC007051-1|AAH07051.1|  145|Homo sapiens ubiquitin-conjugating e...    32   2.0  
AF049140-1|AAC05381.1|  145|Homo sapiens MMS2 protein.                 32   2.0  
AY705349-1|AAU11525.1|  508|Homo sapiens eyes absent homolog 2 p...    32   2.7  

>X98091-1|CAA66717.1|  145|Homo sapiens vitamin D inducible protein
           protein.
          Length = 145

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = -3

Query: 782 LMTLKDNMKLSQPPEGSTF 726
           LM  K+NMKL QPPEG T+
Sbjct: 125 LMMSKENMKLPQPPEGQTY 143


>U62136-1|AAB04758.2|  145|Homo sapiens enterocyte differentiation
           associated factor EDAF-1 protein.
          Length = 145

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = -3

Query: 782 LMTLKDNMKLSQPPEGSTF 726
           LM  K+NMKL QPPEG T+
Sbjct: 125 LMMSKENMKLPQPPEGQTY 143


>DQ003720-1|AAY16979.1|  145|Homo sapiens ubiquitin-conjugating
           enzyme E2 variant 2 protein.
          Length = 145

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = -3

Query: 782 LMTLKDNMKLSQPPEGSTF 726
           LM  K+NMKL QPPEG T+
Sbjct: 125 LMMSKENMKLPQPPEGQTY 143


>CR407628-1|CAG28556.1|  145|Homo sapiens UBE2V2 protein.
          Length = 145

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = -3

Query: 782 LMTLKDNMKLSQPPEGSTF 726
           LM  K+NMKL QPPEG T+
Sbjct: 125 LMMSKENMKLPQPPEGQTY 143


>BT006744-1|AAP35390.1|  145|Homo sapiens ubiquitin-conjugating
           enzyme E2 variant 2 protein.
          Length = 145

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = -3

Query: 782 LMTLKDNMKLSQPPEGSTF 726
           LM  K+NMKL QPPEG T+
Sbjct: 125 LMMSKENMKLPQPPEGQTY 143


>BC062418-1|AAH62418.1|  145|Homo sapiens ubiquitin-conjugating
           enzyme E2 variant 2 protein.
          Length = 145

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = -3

Query: 782 LMTLKDNMKLSQPPEGSTF 726
           LM  K+NMKL QPPEG T+
Sbjct: 125 LMMSKENMKLPQPPEGQTY 143


>BC028673-1|AAH28673.1|  145|Homo sapiens ubiquitin-conjugating
           enzyme E2 variant 2 protein.
          Length = 145

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = -3

Query: 782 LMTLKDNMKLSQPPEGSTF 726
           LM  K+NMKL QPPEG T+
Sbjct: 125 LMMSKENMKLPQPPEGQTY 143


>BC016710-1|AAH16710.1|  145|Homo sapiens ubiquitin-conjugating
           enzyme E2 variant 2 protein.
          Length = 145

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = -3

Query: 782 LMTLKDNMKLSQPPEGSTF 726
           LM  K+NMKL QPPEG T+
Sbjct: 125 LMMSKENMKLPQPPEGQTY 143


>BC016332-1|AAH16332.1|  145|Homo sapiens ubiquitin-conjugating
           enzyme E2 variant 2 protein.
          Length = 145

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = -3

Query: 782 LMTLKDNMKLSQPPEGSTF 726
           LM  K+NMKL QPPEG T+
Sbjct: 125 LMMSKENMKLPQPPEGQTY 143


>BC007051-1|AAH07051.1|  145|Homo sapiens ubiquitin-conjugating
           enzyme E2 variant 2 protein.
          Length = 145

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = -3

Query: 782 LMTLKDNMKLSQPPEGSTF 726
           LM  K+NMKL QPPEG T+
Sbjct: 125 LMMSKENMKLPQPPEGQTY 143


>AF049140-1|AAC05381.1|  145|Homo sapiens MMS2 protein.
          Length = 145

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = -3

Query: 782 LMTLKDNMKLSQPPEGSTF 726
           LM  K+NMKL QPPEG T+
Sbjct: 125 LMMSKENMKLPQPPEGQTY 143


>AY705349-1|AAU11525.1|  508|Homo sapiens eyes absent homolog 2
           protein.
          Length = 508

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +1

Query: 487 FYKGHNNFGNVIK*MGTRIRYDKHPTYISEQYLNYKGNN*SAVHAPA 627
           FY+G N  GN          Y  HP +   QY  Y G++ +  + PA
Sbjct: 143 FYQGGNGLGNAAGFGSVHQDYPSHPGFPQSQYPQYYGSSYNPPYVPA 189


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,779,607
Number of Sequences: 237096
Number of extensions: 1710386
Number of successful extensions: 1928
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1928
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)