Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt18d05
         (436 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060880-1|AAL28428.1|  254|Drosophila melanogaster GM04207p pro...    87   1e-17
AF005855-1|AAB81486.1|  274|Drosophila melanogaster anon2A5 prot...    87   1e-17
AE014297-2240|AAF55341.3|  278|Drosophila melanogaster CG10340-P...    87   1e-17
AF544244-1|AAQ11746.1|  478|Drosophila melanogaster G-protein co...    28   6.3  
AE014296-441|AAF47635.2|  478|Drosophila melanogaster CG8985-PA ...    28   6.3  

>AY060880-1|AAL28428.1|  254|Drosophila melanogaster GM04207p
           protein.
          Length = 254

 Score = 87.0 bits (206), Expect = 1e-17
 Identities = 40/85 (47%), Positives = 49/85 (57%)
 Frame = -3

Query: 434 IWEEYHQNKEVXSAXTXVDVYSXXKETXNHFPVFLFPXXRSQGYEFIMCQXSGHXVXLXP 255
           IW EYH+ KEV +A      Y          PVFL P  RS+G+EF+M Q + + V   P
Sbjct: 103 IWLEYHKTKEVLAATLSTSQYENLMARAKEHPVFLLPLPRSEGFEFVMLQFAANTVHFTP 162

Query: 254 LLXXQVHKENAPECLTMVXXTXLSD 180
           LL  QVH ENAPECLT+V  T + D
Sbjct: 163 LLAYQVHHENAPECLTLVHYTEVQD 187



 Score = 34.7 bits (76), Expect = 0.055
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -2

Query: 108 ANQFQMYYSGKDPERLKLXESXTXSPDTFKH 16
           AN+ QM+Y   D  +L+L  + T  PD FKH
Sbjct: 211 ANELQMFYLKPDEGKLRLLNTFTRKPDEFKH 241


>AF005855-1|AAB81486.1|  274|Drosophila melanogaster anon2A5
           protein.
          Length = 274

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 40/85 (47%), Positives = 49/85 (57%)
 Frame = -3

Query: 434 IWEEYHQNKEVXSAXTXVDVYSXXKETXNHFPVFLFPXXRSQGYEFIMCQXSGHXVXLXP 255
           IW EYH+ KEV +A      Y          PVFL P  RS+G+EF+M Q + + V   P
Sbjct: 123 IWLEYHKTKEVLAATLSTSQYENLMARAKEHPVFLLPLPRSEGFEFVMLQFAANTVHFTP 182

Query: 254 LLXXQVHKENAPECLTMVXXTXLSD 180
           LL  QVH ENAPECLT+V  T + D
Sbjct: 183 LLAYQVHHENAPECLTVVHYTEVQD 207



 Score = 35.9 bits (79), Expect = 0.024
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -2

Query: 108 ANQFQMYYSGKDPERLKLXESXTXSPDTFKH 16
           AN+ QM+Y   D  RL+L  + T  PD FKH
Sbjct: 231 ANELQMFYLKPDEGRLRLLNTFTRKPDEFKH 261


>AE014297-2240|AAF55341.3|  278|Drosophila melanogaster CG10340-PA
           protein.
          Length = 278

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 40/85 (47%), Positives = 49/85 (57%)
 Frame = -3

Query: 434 IWEEYHQNKEVXSAXTXVDVYSXXKETXNHFPVFLFPXXRSQGYEFIMCQXSGHXVXLXP 255
           IW EYH+ KEV +A      Y          PVFL P  RS+G+EF+M Q + + V   P
Sbjct: 127 IWLEYHKTKEVLAATLSTSQYENLMARAKEHPVFLLPLPRSEGFEFVMLQFAANTVHFTP 186

Query: 254 LLXXQVHKENAPECLTMVXXTXLSD 180
           LL  QVH ENAPECLT+V  T + D
Sbjct: 187 LLAYQVHHENAPECLTVVHYTEVQD 211



 Score = 34.7 bits (76), Expect = 0.055
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -2

Query: 108 ANQFQMYYSGKDPERLKLXESXTXSPDTFKH 16
           AN+ QM+Y   D  +L+L  + T  PD FKH
Sbjct: 235 ANELQMFYLKPDEGKLRLLNTFTRKPDEFKH 265


>AF544244-1|AAQ11746.1|  478|Drosophila melanogaster G-protein
           coupled receptor protein.
          Length = 478

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 84  YSTFGIDLHMHCASLPFXTFXXYSXLXXMIPVV 182
           Y  +  DL +H ASL   TF  YS +  +IP +
Sbjct: 254 YRLYHSDLALHNASLQNATFLIYSVVIKLIPCI 286


>AE014296-441|AAF47635.2|  478|Drosophila melanogaster CG8985-PA
           protein.
          Length = 478

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 84  YSTFGIDLHMHCASLPFXTFXXYSXLXXMIPVV 182
           Y  +  DL +H ASL   TF  YS +  +IP +
Sbjct: 254 YRLYHSDLALHNASLQNATFLIYSVVIKLIPCI 286


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,567,977
Number of Sequences: 53049
Number of extensions: 174849
Number of successful extensions: 146
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)