Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt18c14
         (817 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85033-1|CAA59404.1|  187|Homo sapiens phosphatidylethanolamine ...    56   2e-07
X75252-1|CAA53031.1|  187|Homo sapiens phosphatidylethanolamine ...    56   2e-07
S76773-1|AAD14234.1|  140|Homo sapiens neuropolypeptide h3 protein.    56   2e-07
D16111-1|BAA03684.1|  187|Homo sapiens rat phosphatidylethanolam...    56   2e-07
BC031102-1|AAH31102.1|  187|Homo sapiens phosphatidylethanolamin...    56   2e-07
BC017396-1|AAH17396.1|  187|Homo sapiens phosphatidylethanolamin...    56   2e-07
BC008714-1|AAH08714.1|  187|Homo sapiens phosphatidylethanolamin...    56   2e-07

>X85033-1|CAA59404.1|  187|Homo sapiens phosphatidylethanolamine
           binding protein protein.
          Length = 187

 Score = 55.6 bits (128), Expect = 2e-07
 Identities = 23/39 (58%), Positives = 29/39 (74%)
 Frame = -2

Query: 780 RANFKIAEFAKKYNLGDPIAGNFYEAQYDDYVPILYKQL 664
           R  FK+A F KKY L  P+AG  Y+A++DDYVP LY+QL
Sbjct: 146 RGKFKVASFRKKYELRAPVAGTCYQAEWDDYVPKLYEQL 184


>X75252-1|CAA53031.1|  187|Homo sapiens phosphatidylethanolamine
           binding protein protein.
          Length = 187

 Score = 55.6 bits (128), Expect = 2e-07
 Identities = 23/39 (58%), Positives = 29/39 (74%)
 Frame = -2

Query: 780 RANFKIAEFAKKYNLGDPIAGNFYEAQYDDYVPILYKQL 664
           R  FK+A F KKY L  P+AG  Y+A++DDYVP LY+QL
Sbjct: 146 RGKFKVASFRKKYELRAPVAGTCYQAEWDDYVPKLYEQL 184


>S76773-1|AAD14234.1|  140|Homo sapiens neuropolypeptide h3 protein.
          Length = 140

 Score = 55.6 bits (128), Expect = 2e-07
 Identities = 23/39 (58%), Positives = 29/39 (74%)
 Frame = -2

Query: 780 RANFKIAEFAKKYNLGDPIAGNFYEAQYDDYVPILYKQL 664
           R  FK+A F KKY L  P+AG  Y+A++DDYVP LY+QL
Sbjct: 99  RGKFKVASFRKKYELRAPVAGTCYQAEWDDYVPKLYEQL 137


>D16111-1|BAA03684.1|  187|Homo sapiens rat phosphatidylethanolamine
           binding protein homologue protein.
          Length = 187

 Score = 55.6 bits (128), Expect = 2e-07
 Identities = 23/39 (58%), Positives = 29/39 (74%)
 Frame = -2

Query: 780 RANFKIAEFAKKYNLGDPIAGNFYEAQYDDYVPILYKQL 664
           R  FK+A F KKY L  P+AG  Y+A++DDYVP LY+QL
Sbjct: 146 RGKFKVASFRKKYELRAPVAGTCYQAEWDDYVPKLYEQL 184


>BC031102-1|AAH31102.1|  187|Homo sapiens phosphatidylethanolamine
           binding protein 1 protein.
          Length = 187

 Score = 55.6 bits (128), Expect = 2e-07
 Identities = 23/39 (58%), Positives = 29/39 (74%)
 Frame = -2

Query: 780 RANFKIAEFAKKYNLGDPIAGNFYEAQYDDYVPILYKQL 664
           R  FK+A F KKY L  P+AG  Y+A++DDYVP LY+QL
Sbjct: 146 RGKFKVASFRKKYELRAPVAGTCYQAEWDDYVPKLYEQL 184


>BC017396-1|AAH17396.1|  187|Homo sapiens phosphatidylethanolamine
           binding protein 1 protein.
          Length = 187

 Score = 55.6 bits (128), Expect = 2e-07
 Identities = 23/39 (58%), Positives = 29/39 (74%)
 Frame = -2

Query: 780 RANFKIAEFAKKYNLGDPIAGNFYEAQYDDYVPILYKQL 664
           R  FK+A F KKY L  P+AG  Y+A++DDYVP LY+QL
Sbjct: 146 RGKFKVASFRKKYELRAPVAGTCYQAEWDDYVPKLYEQL 184


>BC008714-1|AAH08714.1|  187|Homo sapiens phosphatidylethanolamine
           binding protein 1 protein.
          Length = 187

 Score = 55.6 bits (128), Expect = 2e-07
 Identities = 23/39 (58%), Positives = 29/39 (74%)
 Frame = -2

Query: 780 RANFKIAEFAKKYNLGDPIAGNFYEAQYDDYVPILYKQL 664
           R  FK+A F KKY L  P+AG  Y+A++DDYVP LY+QL
Sbjct: 146 RGKFKVASFRKKYELRAPVAGTCYQAEWDDYVPKLYEQL 184


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,564,642
Number of Sequences: 237096
Number of extensions: 2249731
Number of successful extensions: 3535
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3535
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)