Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt18c06
(852 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006140-1|AAH06140.1| 217|Homo sapiens HYI protein protein. 167 3e-41
AL583862-5|CAI14890.1| 204|Homo sapiens hydroxypyruvate isomera... 167 4e-41
AF284750-1|AAG59852.1| 204|Homo sapiens HT036-ISO protein. 167 4e-41
AL583862-8|CAI14893.1| 247|Homo sapiens hydroxypyruvate isomera... 157 6e-38
BC019041-1|AAH19041.1| 174|Homo sapiens HYI protein protein. 146 9e-35
AF284751-1|AAG59853.1| 174|Homo sapiens HT036 protein. 146 9e-35
AL583862-6|CAI14891.1| 229|Homo sapiens hydroxypyruvate isomera... 142 1e-33
AL583862-7|CAI14892.1| 165|Homo sapiens hydroxypyruvate isomera... 126 8e-29
AY775560-1|AAV84474.1| 229|Homo sapiens endothelial cell apopto... 125 2e-28
AL583862-4|CAI14889.1| 180|Homo sapiens hydroxypyruvate isomera... 122 2e-27
>BC006140-1|AAH06140.1| 217|Homo sapiens HYI protein protein.
Length = 217
Score = 167 bits (407), Expect = 3e-41
Identities = 81/193 (41%), Positives = 125/193 (64%), Gaps = 7/193 (3%)
Frame = -3
Query: 829 VGVTSVPGKEDEFKTNLNTTIEYAKALDAKKIHIMAGKVENPTPK-----HWET-FEKNL 668
+G+ +VPG++ F+ L + YAKAL +IH+MAG+V + E F +NL
Sbjct: 1 MGLGAVPGRQAAFREGLEQAVRYAKALGCPRIHLMAGRVPQGADRIAVKAEMEAVFLENL 60
Query: 667 LYAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQI 491
+A VL E++ GL+EPIN + + P+YFL +A I++++ PNL+L +DIFH Q +
Sbjct: 61 RHAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKVGRPNLQLQMDIFHWQIM 120
Query: 490 AGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKAI 311
G++T NI + LP +GHVQ+AQVP R EP +PGE+N+ Y+ + L GY +VG EY+
Sbjct: 121 DGNLTGNIREFLPIVGHVQVAQVPGRGEPSSPGELNFPYLFQLLENEGYKGFVGCEYQPR 180
Query: 310 GNTKDGLTWINNY 272
G+T +GL+W+ +Y
Sbjct: 181 GDTVEGLSWLRSY 193
>AL583862-5|CAI14890.1| 204|Homo sapiens hydroxypyruvate isomerase
homolog (E. coli) protein.
Length = 204
Score = 167 bits (406), Expect = 4e-41
Identities = 81/193 (41%), Positives = 125/193 (64%), Gaps = 7/193 (3%)
Frame = -3
Query: 829 VGVTSVPGKEDEFKTNLNTTIEYAKALDAKKIHIMAGKVENPTPK-----HWET-FEKNL 668
+G+ +VPG++ F+ L + YAKAL +IH+MAG+V + E F +NL
Sbjct: 1 MGLGAVPGRQAAFREGLEQAVRYAKALGCPRIHLMAGRVPQGADRIAVKAEMEAVFLENL 60
Query: 667 LYAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQI 491
+A VL E++ GL+EPIN + + P+YFL +A I++++ PNL+L +DIFH Q +
Sbjct: 61 RHAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKVGRPNLQLQMDIFHWQIM 120
Query: 490 AGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKAI 311
G++T NI + LP +GHVQ+AQVP R EP +PGE+N+ Y+ + L GY +VG EY+
Sbjct: 121 DGNLTGNIREFLPIVGHVQVAQVPGRGEPSSPGELNFPYLFQLLEDEGYKGFVGCEYQPR 180
Query: 310 GNTKDGLTWINNY 272
G+T +GL+W+ +Y
Sbjct: 181 GDTVEGLSWLRSY 193
>AF284750-1|AAG59852.1| 204|Homo sapiens HT036-ISO protein.
Length = 204
Score = 167 bits (406), Expect = 4e-41
Identities = 81/193 (41%), Positives = 125/193 (64%), Gaps = 7/193 (3%)
Frame = -3
Query: 829 VGVTSVPGKEDEFKTNLNTTIEYAKALDAKKIHIMAGKVENPTPK-----HWET-FEKNL 668
+G+ +VPG++ F+ L + YAKAL +IH+MAG+V + E F +NL
Sbjct: 1 MGLGAVPGRQAAFREGLEQAVRYAKALGCPRIHLMAGRVPQGADRIAVKAEMEAVFLENL 60
Query: 667 LYAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQI 491
+A VL E++ GL+EPIN + + P+YFL +A I++++ PNL+L +DIFH Q +
Sbjct: 61 RHAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKVGRPNLQLQMDIFHWQIM 120
Query: 490 AGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKAI 311
G++T NI + LP +GHVQ+AQVP R EP +PGE+N+ Y+ + L GY +VG EY+
Sbjct: 121 DGNLTGNIREFLPIVGHVQVAQVPGRGEPSSPGELNFPYLFQLLEDEGYKGFVGCEYQPR 180
Query: 310 GNTKDGLTWINNY 272
G+T +GL+W+ +Y
Sbjct: 181 GDTVEGLSWLRSY 193
>AL583862-8|CAI14893.1| 247|Homo sapiens hydroxypyruvate isomerase
homolog (E. coli) protein.
Length = 247
Score = 157 bits (380), Expect = 6e-38
Identities = 78/181 (43%), Positives = 116/181 (64%), Gaps = 7/181 (3%)
Frame = -3
Query: 850 GDTTKGEVGVTSVPGKEDEFKTNLNTTIEYAKALDAKKIHIMAGKVENPTPK-----HWE 686
GD KGE+G+ +VPG++ F+ L + YAKAL +IH+MAG+V + E
Sbjct: 67 GDQEKGEMGLGAVPGRQAAFREGLEQAVRYAKALGCPRIHLMAGRVPQGADRIAVKAEME 126
Query: 685 T-FEKNLLYAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLD 512
F +NL +A VL E++ GL+EPIN + + P+YFL +A I++++ PNL+L +D
Sbjct: 127 AVFLENLRHAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKVGRPNLQLQMD 186
Query: 511 IFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWV 332
IFH Q + G++T NI + LP +GHVQ+AQVP R EP +PGE+N+ Y+ + L GY +V
Sbjct: 187 IFHWQIMDGNLTGNIREFLPIVGHVQVAQVPGRGEPSSPGELNFPYLFQLLEDEGYKGFV 246
Query: 331 G 329
G
Sbjct: 247 G 247
>BC019041-1|AAH19041.1| 174|Homo sapiens HYI protein protein.
Length = 174
Score = 146 bits (354), Expect = 9e-35
Identities = 73/174 (41%), Positives = 111/174 (63%), Gaps = 7/174 (4%)
Frame = -3
Query: 829 VGVTSVPGKEDEFKTNLNTTIEYAKALDAKKIHIMAGKVENPTPK-----HWET-FEKNL 668
+G+ +VPG++ F+ L + YAKAL +IH+MAG+V + E F +NL
Sbjct: 1 MGLGAVPGRQAAFREGLEQAVRYAKALGCPRIHLMAGRVPQGADRIAVKAEMEAVFLENL 60
Query: 667 LYAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQI 491
+A VL E++ GL+EPIN + + P+YFL +A I++++ PNL+L +DIFH Q +
Sbjct: 61 RHAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKVGRPNLQLQMDIFHWQIM 120
Query: 490 AGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVG 329
G++T NI + LP +GHVQ+AQVP R EP +PGE+N+ Y+ + L GY +VG
Sbjct: 121 DGNLTGNIREFLPIVGHVQVAQVPGRGEPSSPGELNFPYLFQLLEDEGYKGFVG 174
>AF284751-1|AAG59853.1| 174|Homo sapiens HT036 protein.
Length = 174
Score = 146 bits (354), Expect = 9e-35
Identities = 73/174 (41%), Positives = 111/174 (63%), Gaps = 7/174 (4%)
Frame = -3
Query: 829 VGVTSVPGKEDEFKTNLNTTIEYAKALDAKKIHIMAGKVENPTPK-----HWET-FEKNL 668
+G+ +VPG++ F+ L + YAKAL +IH+MAG+V + E F +NL
Sbjct: 1 MGLGAVPGRQAAFREGLEQAVRYAKALGCPRIHLMAGRVPQGADRIAVKAEMEAVFLENL 60
Query: 667 LYAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQI 491
+A VL E++ GL+EPIN + + P+YFL +A I++++ PNL+L +DIFH Q +
Sbjct: 61 RHAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKVGRPNLQLQMDIFHWQIM 120
Query: 490 AGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVG 329
G++T NI + LP +GHVQ+AQVP R EP +PGE+N+ Y+ + L GY +VG
Sbjct: 121 DGNLTGNIREFLPIVGHVQVAQVPGRGEPSSPGELNFPYLFQLLEDEGYKGFVG 174
>AL583862-6|CAI14891.1| 229|Homo sapiens hydroxypyruvate isomerase
homolog (E. coli) protein.
Length = 229
Score = 142 bits (344), Expect = 1e-33
Identities = 70/162 (43%), Positives = 106/162 (65%), Gaps = 7/162 (4%)
Frame = -3
Query: 736 IHIMAGKVENPTPK-----HWET-FEKNLLYAVDVLKGENIQGLIEPIN-QYSMPKYFLS 578
IH+MAG+V + E F +NL +A VL E++ GL+EPIN + + P+YFL
Sbjct: 57 IHLMAGRVPQGADRIAVKAEMEAVFLENLRHAAGVLAQEDLVGLLEPINTRITDPQYFLD 116
Query: 577 DYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPDT 398
+A I++++ PNL+L +DIFH Q + G++T NI + LP +GHVQ+AQVP R EP +
Sbjct: 117 TPQQAAAILQKVGRPNLQLQMDIFHWQIMDGNLTGNIREFLPIVGHVQVAQVPGRGEPSS 176
Query: 397 PGEINYKYVLEHLAKSGYDEWVGLEYKAIGNTKDGLTWINNY 272
PGE+N+ Y+ + L GY +VG EY+ G+T +GL+W+ +Y
Sbjct: 177 PGELNFPYLFQLLEDEGYKGFVGCEYQPRGDTVEGLSWLRSY 218
>AL583862-7|CAI14892.1| 165|Homo sapiens hydroxypyruvate isomerase
homolog (E. coli) protein.
Length = 165
Score = 126 bits (305), Expect = 8e-29
Identities = 68/174 (39%), Positives = 106/174 (60%), Gaps = 7/174 (4%)
Frame = -3
Query: 829 VGVTSVPGKEDEFKTNLNTTIEYAKALDAKKIHIMAGKVENPTPK-----HWET-FEKNL 668
+G+ +VPG++ F+ L + +IH+MAG+V + E F +NL
Sbjct: 1 MGLGAVPGRQAAFREGLEQAV---------RIHLMAGRVPQGADRIAVKAEMEAVFLENL 51
Query: 667 LYAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQI 491
+A VL E++ GL+EPIN + + P+YFL +A I++++ PNL+L +DIFH Q +
Sbjct: 52 RHAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKVGRPNLQLQMDIFHWQIM 111
Query: 490 AGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVG 329
G++T NI + LP +GHVQ+AQVP R EP +PGE+N+ Y+ + L GY +VG
Sbjct: 112 DGNLTGNIREFLPIVGHVQVAQVPGRGEPSSPGELNFPYLFQLLEDEGYKGFVG 165
>AY775560-1|AAV84474.1| 229|Homo sapiens endothelial cell apoptosis
protein E-CE1 protein.
Length = 229
Score = 125 bits (302), Expect = 2e-28
Identities = 67/161 (41%), Positives = 99/161 (61%), Gaps = 8/161 (4%)
Frame = -3
Query: 850 GDTTKGEVGVTSVPGKEDEFKTNLNTTIEYAKALDAKKIHIMAGKVENPTPK-----HWE 686
GD KGE+G+ +VPG++ F+ L + YAKAL +IH+MAG+V + E
Sbjct: 67 GDQEKGEMGLGAVPGRQAAFREGLEQAVRYAKALGCPRIHLMAGRVPQGADRIAVKAEME 126
Query: 685 T-FEKNLLYAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLD 512
F +NL +A VL E++ GL+EPIN + + P+YFL +A I++++ PNL+L +D
Sbjct: 127 AVFLENLRHAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKVGRPNLQLQMD 186
Query: 511 IFHLQQIAGDITHNITKLLPYIGHVQIAQVPN-RNEPDTPG 392
IFH Q + G++T NI + LP +GHVQ+AQ P R PG
Sbjct: 187 IFHWQIMDGNLTGNIREFLPIVGHVQVAQGPRPRGAQQAPG 227
>AL583862-4|CAI14889.1| 180|Homo sapiens hydroxypyruvate isomerase
homolog (E. coli) protein.
Length = 180
Score = 122 bits (294), Expect = 2e-27
Identities = 62/144 (43%), Positives = 93/144 (64%), Gaps = 7/144 (4%)
Frame = -3
Query: 739 KIHIMAGKVENPTPK-----HWET-FEKNLLYAVDVLKGENIQGLIEPIN-QYSMPKYFL 581
+IH+MAG+V + E F +NL +A VL E++ GL+EPIN + + P+YFL
Sbjct: 37 RIHLMAGRVPQGADRIAVKAEMEAVFLENLRHAAGVLAQEDLVGLLEPINTRITDPQYFL 96
Query: 580 SDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYIGHVQIAQVPNRNEPD 401
+A I++++ PNL+L +DIFH Q + G++T NI + LP +GHVQ+AQVP R EP
Sbjct: 97 DTPQQAAAILQKVGRPNLQLQMDIFHWQIMDGNLTGNIREFLPIVGHVQVAQVPGRGEPS 156
Query: 400 TPGEINYKYVLEHLAKSGYDEWVG 329
+PGE+N+ Y+ + L GY +VG
Sbjct: 157 SPGELNFPYLFQLLEDEGYKGFVG 180
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,133,912
Number of Sequences: 237096
Number of extensions: 2507665
Number of successful extensions: 4717
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4695
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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