Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt18b07
(848 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089683-1|AAL90421.1| 340|Drosophila melanogaster RH59033p pro... 118 1e-26
AE013599-937|AAF58893.2| 340|Drosophila melanogaster CG1665-PA ... 118 1e-26
AY118319-1|AAM48348.1| 781|Drosophila melanogaster HL08052p pro... 50 4e-06
AE014298-3026|AAF50901.1| 781|Drosophila melanogaster CG1692-PA... 50 4e-06
AF162681-1|AAD50777.1| 737|Drosophila melanogaster maroon-like ... 43 6e-04
AY058463-1|AAL13692.1| 391|Drosophila melanogaster GH26380p pro... 35 0.16
AE014134-2481|AAO41192.2| 948|Drosophila melanogaster CG33090-P... 35 0.16
AE014297-832|AAF54301.3| 2090|Drosophila melanogaster CG31349-PA... 33 0.65
AE013599-2147|AAF58087.2| 7210|Drosophila melanogaster CG18255-P... 30 3.5
AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-P... 30 3.5
X04754-2|CAA28451.1| 420|Drosophila melanogaster yolk polypepti... 29 8.1
M15898-1|AAA29024.1| 420|Drosophila melanogaster protein ( D.me... 29 8.1
AE014298-1957|AAF48314.2| 420|Drosophila melanogaster CG11129-P... 29 8.1
>AY089683-1|AAL90421.1| 340|Drosophila melanogaster RH59033p
protein.
Length = 340
Score = 118 bits (284), Expect = 1e-26
Identities = 76/221 (34%), Positives = 108/221 (48%), Gaps = 6/221 (2%)
Frame = -2
Query: 832 MEPLHVNLAEXAALQKSKTAYVWGVPVPVYDCGFEASEWFSRFLDSSAANYRLAYYASQS 653
M L ++ + K VWGV + V CG + WFS+ + + +L +Y
Sbjct: 131 MPDLELDFEKLDGPGKDVKTSVWGVSIDVMPCGDRINTWFSQAILKKESGLKLVHYPYPK 190
Query: 652 ---CREQRVTANKFYNFTPKDMGALPDELSFNMINEASVEDLNTRLNENCRVTTRNFRPN 482
C R+ + F +D G D SF ++N +SV DLNTRL V FR N
Sbjct: 191 PVRCTNPRLKSMPFIR--QEDSGTFNDATSFMLMNLSSVADLNTRLKNP--VDALQFRGN 246
Query: 481 FVV--EGAEPYAEDGWKFVKIGEN-VFEVIKPCTRCVMTTVDPETGVRNSASEPLNTLKK 311
F + + EPYAED W++V+IGE+ VF + PCTRC+ T ++ +T R+S EPL TL+
Sbjct: 247 FELKMDVDEPYAEDNWQWVRIGEDAVFRTVAPCTRCIFTNINAKTAERSSEGEPLKTLRS 306
Query: 310 YRQIXXXXXXXXXXXXXRMGVQLALRSKPGGTVSLNDPIYV 188
YR +GV + LR G V ND +YV
Sbjct: 307 YR--------LFNYSSPALGVHMGLRLP--GKVKANDVVYV 337
>AE013599-937|AAF58893.2| 340|Drosophila melanogaster CG1665-PA
protein.
Length = 340
Score = 118 bits (284), Expect = 1e-26
Identities = 76/221 (34%), Positives = 108/221 (48%), Gaps = 6/221 (2%)
Frame = -2
Query: 832 MEPLHVNLAEXAALQKSKTAYVWGVPVPVYDCGFEASEWFSRFLDSSAANYRLAYYASQS 653
M L ++ + K VWGV + V CG + WFS+ + + +L +Y
Sbjct: 131 MPDLELDFEKLDGPGKDVKTSVWGVSIDVMPCGDRINTWFSQAILKKESGLKLVHYPYPK 190
Query: 652 ---CREQRVTANKFYNFTPKDMGALPDELSFNMINEASVEDLNTRLNENCRVTTRNFRPN 482
C R+ + F +D G D SF ++N +SV DLNTRL V FR N
Sbjct: 191 PVRCTNPRLKSMPFIR--QEDSGTFNDATSFMLMNLSSVADLNTRLKNP--VDALQFRGN 246
Query: 481 FVV--EGAEPYAEDGWKFVKIGEN-VFEVIKPCTRCVMTTVDPETGVRNSASEPLNTLKK 311
F + + EPYAED W++V+IGE+ VF + PCTRC+ T ++ +T R+S EPL TL+
Sbjct: 247 FELKMDVDEPYAEDNWQWVRIGEDAVFRTVAPCTRCIFTNINAKTAERSSEGEPLKTLRS 306
Query: 310 YRQIXXXXXXXXXXXXXRMGVQLALRSKPGGTVSLNDPIYV 188
YR +GV + LR G V ND +YV
Sbjct: 307 YR--------LFNYSSPALGVHMGLRLP--GKVKANDVVYV 337
>AY118319-1|AAM48348.1| 781|Drosophila melanogaster HL08052p protein.
Length = 781
Score = 50.0 bits (114), Expect = 4e-06
Identities = 45/172 (26%), Positives = 74/172 (43%)
Frame = -2
Query: 817 VNLAEXAALQKSKTAYVWGVPVPVYDCGFEASEWFSRFLDSSAANYRLAYYASQSCREQR 638
++L + AA + V PV DCG ++W S L RL + Q R
Sbjct: 592 LSLDDQAADTAKCVSKVCRQPVEGLDCGDRVAQWLSENLGMEGL--RLLRQSGQ--RNSS 647
Query: 637 VTANKFYNFTPKDMGALPDELSFNMINEASVEDLNTRLNENCRVTTRNFRPNFVVEGAEP 458
K +L ++ F ++N++SV L + E T FR N +++
Sbjct: 648 KDQQKL---------SLVNQAQFLLLNKSSVRSL--QFEEPLDETVDRFRANIIIDTGSA 696
Query: 457 YAEDGWKFVKIGENVFEVIKPCTRCVMTTVDPETGVRNSASEPLNTLKKYRQ 302
+ E +K + IG F+V PC RC M ++ TG R + E L T+ + ++
Sbjct: 697 FEELTYKALSIGGIQFQVEGPCQRCDMICINQRTGER--SPETLTTISRLQK 746
>AE014298-3026|AAF50901.1| 781|Drosophila melanogaster CG1692-PA
protein.
Length = 781
Score = 50.0 bits (114), Expect = 4e-06
Identities = 45/172 (26%), Positives = 74/172 (43%)
Frame = -2
Query: 817 VNLAEXAALQKSKTAYVWGVPVPVYDCGFEASEWFSRFLDSSAANYRLAYYASQSCREQR 638
++L + AA + V PV DCG ++W S L RL + Q R
Sbjct: 592 LSLDDQAADTAKCVSKVCRQPVEGLDCGDRVAQWLSENLGMEGL--RLLRQSGQ--RNSS 647
Query: 637 VTANKFYNFTPKDMGALPDELSFNMINEASVEDLNTRLNENCRVTTRNFRPNFVVEGAEP 458
K +L ++ F ++N++SV L + E T FR N +++
Sbjct: 648 KDQQKL---------SLVNQAQFLLLNKSSVRSL--QFEEPLDETVDRFRANIIIDTGSA 696
Query: 457 YAEDGWKFVKIGENVFEVIKPCTRCVMTTVDPETGVRNSASEPLNTLKKYRQ 302
+ E +K + IG F+V PC RC M ++ TG R + E L T+ + ++
Sbjct: 697 FEELTYKALSIGGIQFQVEGPCQRCDMICINQRTGER--SPETLTTISRLQK 746
>AF162681-1|AAD50777.1| 737|Drosophila melanogaster maroon-like
protein protein.
Length = 737
Score = 42.7 bits (96), Expect = 6e-04
Identities = 39/151 (25%), Positives = 63/151 (41%)
Frame = -2
Query: 817 VNLAEXAALQKSKTAYVWGVPVPVYDCGFEASEWFSRFLDSSAANYRLAYYASQSCREQR 638
++L + AA + V PV DCG ++W S L RL + Q R
Sbjct: 592 LSLDDQAADTAKCVSKVCRQPVEGLDCGDRVAQWLSENLGMEGL--RLLRQSGQ--RNSS 647
Query: 637 VTANKFYNFTPKDMGALPDELSFNMINEASVEDLNTRLNENCRVTTRNFRPNFVVEGAEP 458
K +L ++ F ++N++SV L + E T FR N +++
Sbjct: 648 KDQQKL---------SLVNQAQFLLLNKSSVRSL--QFEEPLDETVDRFRANIIIDTGSA 696
Query: 457 YAEDGWKFVKIGENVFEVIKPCTRCVMTTVD 365
+ E +K + IG F+V PC RC M ++
Sbjct: 697 FEELTYKALSIGGIQFQVEGPCQRCDMICIN 727
>AY058463-1|AAL13692.1| 391|Drosophila melanogaster GH26380p
protein.
Length = 391
Score = 34.7 bits (76), Expect = 0.16
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = -2
Query: 640 RVTANKFYNFTPKDMGALPDELSFNMINEASVEDLNTRLNENCRVTTRNFRPNFVV-EGA 464
+V K N P D+G PDE F +IN ++ D+N + N + + +R +V+ E A
Sbjct: 49 KVMPRKVKNCVPHDLGD-PDEEPFTLINCYNIHDVNDWKDLNTKFVLQVYRDYYVLNELA 107
Query: 463 EPYAEDGWKFVKI 425
+ +++ KF I
Sbjct: 108 QAQSDNASKFSSI 120
>AE014134-2481|AAO41192.2| 948|Drosophila melanogaster CG33090-PB
protein.
Length = 948
Score = 34.7 bits (76), Expect = 0.16
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = -2
Query: 640 RVTANKFYNFTPKDMGALPDELSFNMINEASVEDLNTRLNENCRVTTRNFRPNFVV-EGA 464
+V K N P D+G PDE F +IN ++ D+N + N + + +R +V+ E A
Sbjct: 565 KVMPRKVKNCVPHDLGD-PDEEPFTLINCYNIHDVNDWKDLNTKFVLQVYRDYYVLNELA 623
Query: 463 EPYAEDGWKFVKI 425
+ +++ KF I
Sbjct: 624 QAQSDNASKFSSI 636
>AE014297-832|AAF54301.3| 2090|Drosophila melanogaster CG31349-PA,
isoform A protein.
Length = 2090
Score = 32.7 bits (71), Expect = 0.65
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 750 PFMTAASRPANGSLGS*IVRPRTIG-WPTTPRNPAANRELQQTNSTTLLQRIW 595
PF ++ S P G + + +P G +PT PR P+ +R +N TL ++W
Sbjct: 1926 PFSSSMSLPIAGPVNN---QPSANGRFPTLPREPSTSRGFFDSNGGTLADKLW 1975
>AE013599-2147|AAF58087.2| 7210|Drosophila melanogaster CG18255-PD,
isoform D protein.
Length = 7210
Score = 30.3 bits (65), Expect = 3.5
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Frame = -2
Query: 643 QRVTANKFYNFTPKDMGALPDELSFNMINEASVEDLNTRLNENCRVTTRNFRPNFVVE-- 470
Q + A K ++ T + M +PD +SF I+EA++ + L + C+ + VE
Sbjct: 1149 QELEAAKHFSETVEKMQEVPDSMSFATISEANLPSEASALKDICQPVAKIQEALERVEME 1208
Query: 469 -GAEPYAEDGWKFV--KIGENVFEVIKPCTRCVMTTVDPETGVRNSAS 335
E E +K V K+ E++ E IK + + D + S S
Sbjct: 1209 LSLEESEEQIYKKVHQKVLESIVEPIKQLQSTLQSIEDKTESLAGSES 1256
>AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-PA,
isoform A protein.
Length = 9270
Score = 30.3 bits (65), Expect = 3.5
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Frame = -2
Query: 643 QRVTANKFYNFTPKDMGALPDELSFNMINEASVEDLNTRLNENCRVTTRNFRPNFVVE-- 470
Q + A K ++ T + M +PD +SF I+EA++ + L + C+ + VE
Sbjct: 1149 QELEAAKHFSETVEKMQEVPDSMSFATISEANLPSEASALKDICQPVAKIQEALERVEME 1208
Query: 469 -GAEPYAEDGWKFV--KIGENVFEVIKPCTRCVMTTVDPETGVRNSAS 335
E E +K V K+ E++ E IK + + D + S S
Sbjct: 1209 LSLEESEEQIYKKVHQKVLESIVEPIKQLQSTLQSIEDKTESLAGSES 1256
>X04754-2|CAA28451.1| 420|Drosophila melanogaster yolk polypeptide
3 protein.
Length = 420
Score = 29.1 bits (62), Expect = 8.1
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -2
Query: 421 ENVFEVIKPCTRCVMTTVDPETGVRNSASEPLNTLKKYRQ 302
ENV E + TR +V P + RN + P N+LK+Y++
Sbjct: 330 ENVIEAVARATRYFAESVRPGSE-RNFPAVPANSLKQYKE 368
>M15898-1|AAA29024.1| 420|Drosophila melanogaster protein (
D.melanogaster yp3 geneencoding yolk protein 3, complete
cds. ).
Length = 420
Score = 29.1 bits (62), Expect = 8.1
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -2
Query: 421 ENVFEVIKPCTRCVMTTVDPETGVRNSASEPLNTLKKYRQ 302
ENV E + TR +V P + RN + P N+LK+Y++
Sbjct: 330 ENVIEAVARATRYFAESVRPGSE-RNFPAVPANSLKQYKE 368
>AE014298-1957|AAF48314.2| 420|Drosophila melanogaster CG11129-PA
protein.
Length = 420
Score = 29.1 bits (62), Expect = 8.1
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -2
Query: 421 ENVFEVIKPCTRCVMTTVDPETGVRNSASEPLNTLKKYRQ 302
ENV E + TR +V P + RN + P N+LK+Y++
Sbjct: 330 ENVIEAVARATRYFAESVRPGSE-RNFPAVPANSLKQYKE 368
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,023,134
Number of Sequences: 53049
Number of extensions: 647473
Number of successful extensions: 2269
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2260
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4065385896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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