Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt18b02
(802 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 418 e-118
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 314 1e-86
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 303 2e-83
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 295 4e-81
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 286 3e-78
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 275 5e-75
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 213 2e-56
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 205 7e-54
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 198 7e-52
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 183 3e-47
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 176 3e-45
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 175 8e-45
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 171 1e-43
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 161 8e-41
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 151 1e-37
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 143 3e-35
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 139 5e-34
SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1 |Schiz... 138 1e-33
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 134 1e-32
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 122 8e-29
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 75 9e-15
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 39 7e-04
SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces pombe... 31 0.25
SPCC1442.07c |||ubiquitin/metalloprotease fusion protein|Schizos... 31 0.25
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 30 0.33
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 29 0.58
SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces pombe... 29 0.58
SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex... 29 0.77
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 29 1.0
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 28 1.3
SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr 3... 28 1.8
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 28 1.8
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 27 2.3
SPBPB10D8.02c |||arylsulfatase |Schizosaccharomyces pombe|chr 2|... 27 3.1
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 27 4.1
SPBC216.06c |swi1||replication fork protection complex subunit S... 27 4.1
SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|c... 27 4.1
SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 27 4.1
SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit Swi2|Schizo... 26 5.4
SPAC1F3.09 |mug161||CwfJ family protein|Schizosaccharomyces pomb... 26 5.4
SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces pom... 26 5.4
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 26 5.4
SPAC1952.10c |||conserved fungal protein |Schizosaccharomyces po... 26 7.2
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 26 7.2
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 26 7.2
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 25 9.5
SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr 1|||Ma... 25 9.5
SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription fact... 25 9.5
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 418 bits (1030), Expect = e-118
Identities = 205/260 (78%), Positives = 229/260 (88%), Gaps = 2/260 (0%)
Frame = -2
Query: 801 TYADIGGLDTQIQEIKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKPLLAKAVANQ 622
+YADIGGL++QIQEIKE+VELP THPE YEEMGIKPPKGVILYG PGTGK LLAKAVANQ
Sbjct: 189 SYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQ 248
Query: 621 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGE 442
TSATFLRVVGSELIQKYLGDGP+LVR+LF AEEH+PSIVFIDEIDA+GTKRYD+ SG E
Sbjct: 249 TSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAE 308
Query: 441 REIQRTMLELLNQLDGFD-SRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 265
REIQRTMLELLNQLDGFD S+ D+KVIMATNRI LDPALIRPGRIDRKI F PDE TK
Sbjct: 309 REIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATK 368
Query: 264 RRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 85
R+IFTIHTS+M L +DVNL ELI KDDLSGA+IKAI +EAGL+ALRERRM+V +DF++
Sbjct: 369 RKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDDFRQ 428
Query: 84 SKESVLYRKKEGTPE-GLYL 28
++E VL K EG P GLY+
Sbjct: 429 AREKVLKTKDEGGPAGGLYI 448
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 314 bits (770), Expect = 1e-86
Identities = 145/252 (57%), Positives = 191/252 (75%), Gaps = 1/252 (0%)
Frame = -2
Query: 801 TYADIGGLDTQIQEIKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKPLLAKAVANQ 622
TY +GGL+ QI+EIKE +ELP HPE +E +GI PKG++LYGPPGTGK LLA+AVA+
Sbjct: 143 TYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHH 202
Query: 621 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSG-G 445
T F+RV GSEL+QKY+G+G ++VRELF +A EHAPSI+F+DEID++G+ R DS+ G G
Sbjct: 203 TDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSG 262
Query: 444 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 265
+ E+QRTMLELLNQLDGF++ ++KVIMATNRI+ LDPAL+RPGRIDRKIEFP P + +
Sbjct: 263 DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEAR 322
Query: 264 RRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 85
I IH+ M L ++L + + SGA++K +CTEAG+ ALRERR+ VT EDF+
Sbjct: 323 AEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDFEL 382
Query: 84 SKESVLYRKKEG 49
+ VL + G
Sbjct: 383 AVAKVLNKGDSG 394
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 303 bits (743), Expect = 2e-83
Identities = 137/241 (56%), Positives = 189/241 (78%), Gaps = 1/241 (0%)
Frame = -2
Query: 801 TYADIGGLDTQIQEIKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKPLLAKAVANQ 622
+YAD+GGLD Q QE++E+VELP T + Y ++GI PP+GV+LYGPPGTGK +L KAVAN
Sbjct: 132 SYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANS 191
Query: 621 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGE 442
T+A F+RVVGSE +QKYLG+GP++VR++FR+A E+AP+I+FIDEIDA+ TKR+D+ +G +
Sbjct: 192 TAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGAD 251
Query: 441 REIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFP-LPDEKTK 265
RE+QR ++ELL Q+DGFD +VKVIMATNR +TLDPAL+RPGR+DRKIEFP D + +
Sbjct: 252 REVQRILIELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQR 311
Query: 264 RRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 85
R +F T++M L+ +V+L IM D SGA I AI +AGL+A+R+ R + D ++
Sbjct: 312 RLVFQTITAKMLLSPEVDLDTFIMRPDASSGAQIAAIMQDAGLLAVRKSRGVILQSDIEE 371
Query: 84 S 82
+
Sbjct: 372 A 372
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 295 bits (725), Expect = 4e-81
Identities = 132/249 (53%), Positives = 188/249 (75%)
Frame = -2
Query: 798 YADIGGLDTQIQEIKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKPLLAKAVANQT 619
Y+DIGGL QI+E+ E++ LP + + ++G+KPPKG +++GPPGTGK LLA+A A Q+
Sbjct: 184 YSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQS 243
Query: 618 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGER 439
+ATFL++ +L+Q ++GDG KLVR+ F +A+E +P+I+FIDE+DA+GTKR+DS G+R
Sbjct: 244 NATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKAGDR 303
Query: 438 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 259
E+QRTMLELLNQLDGF S VKVI ATNR++TLDPAL+R GR+DRK+EFPLP+E+ +
Sbjct: 304 EVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVG 363
Query: 258 IFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSK 79
I IH+ +M + DD+N EL S D+ +GA +K++C EAG++ALR+ K+ +E F
Sbjct: 364 ILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKINHEHFMDGI 423
Query: 78 ESVLYRKKE 52
V RK +
Sbjct: 424 LEVQMRKSK 432
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 286 bits (701), Expect = 3e-78
Identities = 131/262 (50%), Positives = 183/262 (69%)
Frame = -2
Query: 801 TYADIGGLDTQIQEIKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKPLLAKAVANQ 622
TY D+GG QI+ ++E VELP PE + ++GI PPKG++LYGPPGTGK L A+AVAN+
Sbjct: 177 TYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANR 236
Query: 621 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGE 442
T ATF+RV+GSEL+QKY+G+G ++VRELF +A I+F DEIDA+G R+D +GG+
Sbjct: 237 TDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAGGD 296
Query: 441 REIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKR 262
E+QRTMLEL+ QLDGFD RG++KV+ ATNR TLD AL+RPGRIDRK+EF LPD + +
Sbjct: 297 NEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRA 356
Query: 261 RIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKS 82
I IH M + D+ + +GA+++++CTEAG+ A+R RR T +DF +
Sbjct: 357 HILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRARRRVATEKDFLDA 416
Query: 81 KESVLYRKKEGTPEGLYL*MYS 16
+ V+ ++ + Y+ M S
Sbjct: 417 VQKVVKGNQKFSSTADYMNMSS 438
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 275 bits (674), Expect = 5e-75
Identities = 124/253 (49%), Positives = 179/253 (70%), Gaps = 1/253 (0%)
Frame = -2
Query: 801 TYADIGGLDTQIQEIKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKPLLAKAVANQ 622
++A +GGL+ QI+E++E +ELP +PE + +GIKPPKGV+LYGPPGTGK LLA+AVA
Sbjct: 130 SFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAAS 189
Query: 621 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGE 442
FL+VV S ++ KY+G+ +++RE+F A+EH P ++F+DEIDA+G +R+ + +
Sbjct: 190 LGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSAD 249
Query: 441 REIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKR 262
REIQRT++ELLNQ+DGFD G K+IMATNR +TLDPAL+RPGR+DRKIE PLP+E +
Sbjct: 250 REIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRM 309
Query: 261 RIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKS 82
I IH +++ +++ L+ D +GAD++ + TEAG +A++E R V D +
Sbjct: 310 EILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLMSA 369
Query: 81 KESVLYRKK-EGT 46
V KK EGT
Sbjct: 370 ARKVADLKKLEGT 382
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 213 bits (521), Expect = 2e-56
Identities = 100/227 (44%), Positives = 153/227 (67%)
Frame = -2
Query: 798 YADIGGLDTQIQEIKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKPLLAKAVANQT 619
Y DIGG Q+ +I+E VELP HP+ ++ +GIKPP+G+++YGPPGTGK L+A+AVAN+T
Sbjct: 223 YDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANET 282
Query: 618 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGER 439
A F + G E++ K G+ +R+ F AE+++P+I+FIDEID++ KR +N GE
Sbjct: 283 GAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTN--GEV 340
Query: 438 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 259
E +R + +LL +DG +R +V V+ ATNR ++DPAL R GR DR+++ +PD +
Sbjct: 341 E-RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLE 399
Query: 258 IFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALRER 118
I IHT M LADDV+L ++ G+D+ ++C+EA + +RE+
Sbjct: 400 ILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREK 446
Score = 186 bits (453), Expect = 3e-48
Identities = 93/242 (38%), Positives = 150/242 (61%)
Frame = -2
Query: 798 YADIGGLDTQIQEIKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKPLLAKAVANQT 619
+ DIGGL+ +E++E+V++P + E + G+ P KGV+ +GPPGTGK LLAKA+AN+
Sbjct: 496 WEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANEC 555
Query: 618 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGER 439
SA F+ V G EL+ + G+ VR++F A AP +VF+DE+D++ R +++G
Sbjct: 556 SANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKAR-GASAGDSG 614
Query: 438 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 259
R + +LL ++DG +S+ +V VI ATNR + +DPAL+RPGR+D+ I PLPDE+ +
Sbjct: 615 GGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFS 674
Query: 258 IFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSK 79
I +A+DV+L + + SGAD++ + A +A+++ ED K+
Sbjct: 675 ILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDS----IEEDIKREN 730
Query: 78 ES 73
E+
Sbjct: 731 ET 732
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 205 bits (500), Expect = 7e-54
Identities = 96/226 (42%), Positives = 149/226 (65%)
Frame = -2
Query: 798 YADIGGLDTQIQEIKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKPLLAKAVANQT 619
++DIGG + Q++KESVE P TH E + +G++PPKGV+LYGPPG K + AKA+A +T
Sbjct: 547 WSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATET 606
Query: 618 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGER 439
F+ V G EL K++G+ + VR++F+ A + +PS++F DEIDA+ R + NS
Sbjct: 607 GLNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALTANRGEDNSS--- 663
Query: 438 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 259
R + LLN+LDG ++ +V V+ ATNR + +DPAL+RPGR+DR + P+ + +++
Sbjct: 664 --DRVVAALLNELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQ 721
Query: 258 IFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALRE 121
I I +M A+DV+L + + SGA++ A+C EAGL+A+ E
Sbjct: 722 IVKIQAEKMKFAEDVDLDLIAEKTEGCSGAEVVALCQEAGLIAMHE 767
Score = 178 bits (434), Expect = 6e-46
Identities = 93/227 (40%), Positives = 137/227 (60%), Gaps = 1/227 (0%)
Frame = -2
Query: 801 TYADIGGLDTQIQEIKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKPLLAKAVANQ 622
T++ IGGL QI +I++ VELP +PE ++ I PP+GV+LYGPPGTGK ++ +AVA +
Sbjct: 277 TFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAE 336
Query: 621 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGE 442
+A + G ++ KYLG+ +R++F A H PSI+FIDEIDA+ KR + S E
Sbjct: 337 ANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEAE 396
Query: 441 REIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKR 262
R + LL LDG + G V VI ATNR ++D AL RPGR++++IE +PD+ +
Sbjct: 397 ---SRAVATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARL 453
Query: 261 RIFTIHTSRM-TLADDVNLSELIMSKDDLSGADIKAICTEAGLMALR 124
I + S + +D L +L GAD+ A+ EA L A++
Sbjct: 454 DIIKLLLSGVPNEINDAQLEDLASRTHAYVGADLAAVVREAALRAIK 500
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 198 bits (483), Expect = 7e-52
Identities = 103/246 (41%), Positives = 148/246 (60%), Gaps = 3/246 (1%)
Frame = -2
Query: 798 YADIGGLDTQIQEIKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKPLLAKAVANQT 619
+AD+ G+D +EI E V+ +P++YE +G K P+G IL GPPGTGK LLAKA A +
Sbjct: 295 FADVAGVDEAKEEIMEFVKF-LKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEA 353
Query: 618 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKR-YDSNSGGE 442
+ FL V GSE ++ ++G GP VR+LF A ++AP I+FIDEIDA+G R G
Sbjct: 354 NVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEIDAIGKARGRGGQFGSN 413
Query: 441 REIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKR 262
E + T+ +LL ++DGF S + V TNR + LDPAL+RPGR DR+I PD +
Sbjct: 414 DERESTLNQLLVEMDGFTSSEHIVVFAGTNRPDVLDPALLRPGRFDRQITIDRPDIGGRE 473
Query: 261 RIFTIHTSRMTLADDVNL--SELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 88
+IF +H + AD+++L L + +GADI +C E L+A R +V F+
Sbjct: 474 QIFKVHLKHIKAADNIDLIAKRLAVLTSGFTGADIMNVCNEGALIAARSNSNEVQMVHFE 533
Query: 87 KSKESV 70
++ E V
Sbjct: 534 QAIERV 539
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 183 bits (445), Expect = 3e-47
Identities = 100/248 (40%), Positives = 147/248 (59%), Gaps = 4/248 (1%)
Frame = -2
Query: 798 YADIGGLDTQIQEIKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKPLLAKAVANQT 619
++D+ G+D +E++E V+ P ++ +G K P+GV+L GPPGTGK +LA+AVA +
Sbjct: 266 FSDVQGVDEAKEELEEIVDF-LRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGEA 324
Query: 618 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGER 439
+ F + GS+ + Y+G G K VRELF A + APSI+FIDE+DA+G KR N+
Sbjct: 325 NVPFFFMSGSQFDEMYVGVGAKRVRELFAAARKQAPSIIFIDELDAIGQKR---NARDAA 381
Query: 438 EIQRTMLELLNQLDGFDSRGD----VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 271
+++T+ +LL LDGF D V I ATN E+LDPAL RPGR DR I PLPD +
Sbjct: 382 HMRQTLNQLLVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHVPLPDVR 441
Query: 270 TKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 91
+ I HT + L DV+LS + +GAD+ + +A + A + V+ D
Sbjct: 442 GRLAILLQHTRHVPLGKDVDLSIIARGTSGFAGADLANLINQAAVYASKNLSTAVSMRDL 501
Query: 90 KKSKESVL 67
+ SK+ +L
Sbjct: 502 EWSKDRIL 509
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 779
Score = 176 bits (429), Expect = 3e-45
Identities = 92/228 (40%), Positives = 138/228 (60%), Gaps = 2/228 (0%)
Frame = -2
Query: 801 TYADIGGLDTQIQEIKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKPLLAKAVANQ 622
++ +IG L + E++ ++ P PE Y+ +GI P GV+L+GPPG GK LLAKAVAN+
Sbjct: 490 SWNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANE 549
Query: 621 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGE 442
+ A F+ + G EL+ KY+G+ + VR++F A +P ++F DE+DA+ +R DS S
Sbjct: 550 SKANFISIRGPELLNKYVGESERAVRQVFLRARASSPCVIFFDELDAMVPRRDDSLSEAS 609
Query: 441 REIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKR 262
+ T LL +LDG R V VI ATNR + +DPA++RPGR+D+ + LPD +
Sbjct: 610 SRVVNT---LLTELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERV 666
Query: 261 RIFTIHTSRMTLADDVNLSELIMSK--DDLSGADIKAICTEAGLMALR 124
I T + L ++VNL L + + SGAD+ A+ EA + ALR
Sbjct: 667 EILKTLTKQTPLHEEVNLDVLGRDERCSNFSGADLAALVREAAVTALR 714
Score = 169 bits (410), Expect = 5e-43
Identities = 89/225 (39%), Positives = 130/225 (57%), Gaps = 1/225 (0%)
Frame = -2
Query: 795 ADIGGLDTQIQEIKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKPLLAKAVANQTS 616
+DIGGLD I E+ E V +P HPE Y+ GI PP+GV+L+GPPG GK +LA A+AN+
Sbjct: 174 SDIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELG 233
Query: 615 ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGERE 436
F+ + ++ G+ K VRE+F A+ AP ++FIDEIDAV KR + ER
Sbjct: 234 VPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTPKRESAQREMERR 293
Query: 435 IQRTMLELLNQLDGFDSRG-DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 259
I L +++L + G V VI ATNR ++LD AL R GR DR+I +P + + +
Sbjct: 294 IVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAREK 353
Query: 258 IFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALR 124
I + L+ D + +L GAD+KA+ AG++A++
Sbjct: 354 ILRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIK 398
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 175 bits (425), Expect = 8e-45
Identities = 90/232 (38%), Positives = 137/232 (59%), Gaps = 6/232 (2%)
Frame = -2
Query: 801 TYADIGGLDTQIQEIKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKPLLAKAVANQ 622
++ +GGLD I ++KE V LP +PE ++ ++PP+GV+ +GPPGTGK L+A+A+A
Sbjct: 264 SFESVGGLDNYINQLKEMVMLPLLYPEIFQRFNMQPPRGVLFHGPPGTGKTLMARALAAA 323
Query: 621 TSA-----TFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 457
S+ +F G++ + K++G+ + +R LF A+ PSI+F DEID + R
Sbjct: 324 CSSENKKVSFYMRKGADCLSKWVGEAERQLRLLFEEAKSTQPSIIFFDEIDGLAPVRSSK 383
Query: 456 NSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 277
I T+L L +DG +SRG V +I ATNR + +DPAL RPGR DR+ FPLPD
Sbjct: 384 QEQIHASIVSTLLAL---MDGMESRGQVIIIGATNRPDAVDPALRRPGRFDREFYFPLPD 440
Query: 276 EKTKRRIFTIHTSRMTLADDVNLSELIMSKD-DLSGADIKAICTEAGLMALR 124
+++I IHT L ++ K GAD++A+CTEA L +++
Sbjct: 441 RDARKKIIEIHTRNWDPPVPEWLCSMLAEKSKGYGGADLRALCTEAALNSIK 492
Score = 32.7 bits (71), Expect = 0.062
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = -2
Query: 723 EYYEEMGIKPPKGVILYGPPGTGKPLLAKAVANQTSATFLRVVG-SELIQKYLGDGPKLV 547
E +E + I P+ +I G G G+ L A+ Q ++ S L+Q +
Sbjct: 593 ETFETLRIYKPRFLIC-GRKGLGQTALGPAILQQYEGVHVQSFDMSTLLQDSTQSIETSI 651
Query: 546 RELFRVAEEHAPSIVFIDEID 484
LF H PSI++I +ID
Sbjct: 652 IHLFLEVRRHTPSIIYIPDID 672
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 171 bits (415), Expect = 1e-43
Identities = 97/232 (41%), Positives = 136/232 (58%), Gaps = 7/232 (3%)
Frame = -2
Query: 798 YADIGGLDTQIQEIKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKPLLAKAVA--- 628
+ IGGL+ I ++KE V LP +PE + + I PP+GV+ +GPPGTGK L+A+ +A
Sbjct: 371 FNSIGGLEDIILQLKEMVMLPLLYPEVFLHLHITPPRGVLFHGPPGTGKTLMARVLAANC 430
Query: 627 ---NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 457
NQ + FLR GS+ + K++G+ + +R LF A PSI+F DEID + R
Sbjct: 431 STKNQKISFFLRK-GSDCLSKWVGEAERQLRLLFEEARRVQPSIIFFDEIDGLAPIRSSK 489
Query: 456 NSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 277
I T+L L+ DG D+RG V VI ATNR LDPAL RPGR DR+ FPLP+
Sbjct: 490 QEQTHSSIVSTLLALM---DGLDTRGQVVVIGATNRPNDLDPALRRPGRFDREFYFPLPN 546
Query: 276 EKTKRRIFTIHTSRMT-LADDVNLSELIMSKDDLSGADIKAICTEAGLMALR 124
++ + +I I++ + + L L S GAD+KA+CTEA L A+R
Sbjct: 547 KQARMKILEINSLHFSPKIPESYLLHLAESTSGYGGADLKALCTEAALNAVR 598
Score = 28.3 bits (60), Expect = 1.3
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = -2
Query: 663 GTGKPLLAKAVANQTSATFLRVVG-SELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 487
G G L+K + + ++ + SEL+ L+ ++F A ++APSI+FI+ +
Sbjct: 716 GYGCTYLSKVLFSMLDGIHVQSLDISELLMDTTTSPRSLLTKIFSEARKNAPSIIFINNV 775
Query: 486 D 484
+
Sbjct: 776 E 776
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 161 bits (392), Expect = 8e-41
Identities = 85/233 (36%), Positives = 142/233 (60%), Gaps = 4/233 (1%)
Frame = -2
Query: 792 DIGGLDTQIQEIKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKPLLAKAVANQTSA 613
DIGGL+ ++++++LP PE + + G+KP GV+LYGPPGTGK LLAKAVA + S
Sbjct: 656 DIGGLEEAKTVLRDTLQLPLQFPELFSQ-GLKPRSGVLLYGPPGTGKTLLAKAVATELSL 714
Query: 612 TFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREI 433
F+ + G EL+ Y+G+ VR +F A +P ++F DE+D++ R +S+ G +
Sbjct: 715 EFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVIFFDELDSIAPHRGNSSDSG-NVM 773
Query: 432 QRTMLELLNQLDGF--DSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL-PDEKTKR 262
R + +LL +LD D+ V VI ATNR + LDP+L+RPGR D+ + + E++K
Sbjct: 774 DRVVSQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKA 833
Query: 261 RIFTIHTSRMTLADDVNLSELIMS-KDDLSGADIKAICTEAGLMALRERRMKV 106
+ T L + ++L+E+ + + +GAD+ A+C++A L A++ + ++
Sbjct: 834 SMLRALTKTFKLDETIDLNEIAKNCHPNFTGADMYALCSDAVLSAIKRKTNEI 886
Score = 31.1 bits (67), Expect = 0.19
Identities = 36/179 (20%), Positives = 80/179 (44%), Gaps = 3/179 (1%)
Frame = -2
Query: 681 ILYGPPGTGKPLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAP-SI 505
+L+G P TGK + VA+ SA + E D + ++F +P +I
Sbjct: 426 LLHGNPFTGKTKAVEEVASLFSAPVFTISSYEFADA-TADHLEAKLDMFVQNVVKSPCAI 484
Query: 504 VFIDEIDAVGTKRYDSN-SGGEREIQRTMLELLNQLDGFDS-RGDVKVIMATNRIETLDP 331
+F+ ++D + + N G + IQ LL+++D S +G VI + IE +
Sbjct: 485 IFVKDLDVLSISSDEGNIVPGSKSIQ----ILLSKIDLVKSPQGRYIVIGTCHSIEKIPY 540
Query: 330 ALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAI 154
++ + K DE+ + + I+ + + + ++L ++ + + +S +++ +
Sbjct: 541 EILSESFFELKFSELEMDERLE--LLKIYANNVIIDKRISLKDVALKTNSMSFGELECL 597
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 151 bits (365), Expect = 1e-37
Identities = 86/224 (38%), Positives = 131/224 (58%), Gaps = 1/224 (0%)
Frame = -2
Query: 792 DIGGLDTQIQEIKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKPLLAKAVANQTSA 613
DI GL+ + +KE+V LP P+ + G KP G++LYGPPGTGK LAKAVA + +
Sbjct: 130 DIAGLENAKEALKETVLLPIKLPQLFSH-GRKPWSGILLYGPPGTGKSYLAKAVATEAGS 188
Query: 612 TFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREI 433
TF + S+L+ K++G+ +LVR+LF +A E PSI+FIDEID++ R + S R I
Sbjct: 189 TFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSIIFIDEIDSLCGSRSEGESESSRRI 248
Query: 432 QRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIF 253
+ L +N + G D G V V+ ATN TLD A+ R R +++I PLP+ + R+F
Sbjct: 249 KTEFLVQMNGV-GKDESG-VLVLGATNIPWTLDSAIRR--RFEKRIYIPLPNAHARARMF 304
Query: 252 TIHTSRM-TLADDVNLSELIMSKDDLSGADIKAICTEAGLMALR 124
++ ++ + + EL D SG+DI + +A + +R
Sbjct: 305 ELNVGKIPSELTSQDFKELAKMTDGYSGSDISIVVRDAIMEPVR 348
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 143 bits (346), Expect = 3e-35
Identities = 90/243 (37%), Positives = 137/243 (56%), Gaps = 15/243 (6%)
Frame = -2
Query: 789 IGGLDTQIQEI-KESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKPLLAKAVANQTSA 613
IGGLD++ I + + P E++GI KG++LYGPPGTGK L+A+ + +A
Sbjct: 271 IGGLDSEFSAIFRRAFASRLFPPGMVEKLGINHVKGILLYGPPGTGKTLIARQIGKMLNA 330
Query: 612 TFLRVV-GSELIQKYLGDGPKLVRELFRVAE--------EHAPSIVFIDEIDAVGTKRYD 460
++V G E++ KY+G + VR+LF AE E I+ DE+DA+ KR
Sbjct: 331 REPKIVNGPEILNKYVGQSEENVRKLFADAEREYRDRGEESGLHIIIFDELDAICKKR-- 388
Query: 459 SNSGGEREI-QRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL 283
+SGG+ + + + +LL ++DG D ++ VI TNR + +D AL+RPGR++ +E L
Sbjct: 389 GSSGGDTGVGDQVVNQLLAKMDGVDQLNNILVIGMTNRKDMIDEALLRPGRLEVHMEISL 448
Query: 282 PDEKTKRRIFTIHTSRMT----LADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERR 115
PDE + +I IHTSRM L +DV++ EL + SGA+I + A A R
Sbjct: 449 PDEHGRLQILKIHTSRMASNGILENDVDMEELASLTKNFSGAEIAGLIKSASSFAF-YRH 507
Query: 114 MKV 106
+KV
Sbjct: 508 IKV 510
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 139 bits (336), Expect = 5e-34
Identities = 70/232 (30%), Positives = 131/232 (56%)
Frame = -2
Query: 798 YADIGGLDTQIQEIKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKPLLAKAVANQT 619
+ DI G+ + +++ +E P + Y++ ++ P G++L+G PG GK LA A+++
Sbjct: 605 WIDIAGMQEAKEAVRDIIESPVKYSLIYKQCRLRLPTGILLFGYPGCGKTYLASAISSTF 664
Query: 618 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGER 439
F+ + G EL+ KY+G + VR+LF A+ P ++F DE D+V +R ++G
Sbjct: 665 PVQFISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEFDSVAPRRGQDSTG--- 721
Query: 438 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 259
R + ++L Q+DG +S V ++ AT R + +DPAL+RPGR+D+ I LP+E+ +
Sbjct: 722 VTDRVVNQILTQMDGAESLDGVYIVAATTRPDMIDPALLRPGRLDKLIFCDLPNEEERLE 781
Query: 258 IFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVT 103
+ +R + + L +L D + AD+ ++ +A L+A+ + +V+
Sbjct: 782 VLQKLANRFHIENAAMLKKLSTLTDGYTYADLSSLLYDAHLIAVHKLLKRVS 833
>SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 138 bits (333), Expect = 1e-33
Identities = 78/229 (34%), Positives = 131/229 (57%), Gaps = 2/229 (0%)
Frame = -2
Query: 801 TYADIGGLDTQIQEIKESVELPXTHPEYYEEMG--IKPPKGVILYGPPGTGKPLLAKAVA 628
++ DIGG+D + ++ + V P +PE ++ G + PKG++LYGPPG GK +LAKA+A
Sbjct: 87 SFDDIGGMDEHVNQLLQDVLFPLKYPEVFDTHGGLLSCPKGLLLYGPPGCGKTMLAKALA 146
Query: 627 NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSG 448
Q+ ATF+ V L K+ G+ KLV LF +A + P+I+FIDEID +R ++
Sbjct: 147 KQSQATFINVSVGLLTDKWFGESNKLVDALFTLARKLEPTIIFIDEIDTFLRQRQRTDHE 206
Query: 447 GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 268
+I+ + + + L SR V V+ ATNR +D A+ R R+ + PLP+ +
Sbjct: 207 AMAQIKAEFMSMWDGLLSGQSR--VLVLGATNRPADIDEAIRR--RMPKVFSIPLPNAEQ 262
Query: 267 KRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALRE 121
+R+I ++ ++ L + + + ++ + LSG+ IK +C A + RE
Sbjct: 263 RRKILELYLKKVPLEANFDWNGVVNATAGLSGSYIKEVCRSALSVPRRE 311
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 134 bits (325), Expect = 1e-32
Identities = 86/237 (36%), Positives = 131/237 (55%), Gaps = 12/237 (5%)
Frame = -2
Query: 798 YADIGGLDTQIQEIKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKPLLAKAVANQT 619
++DI GLD +KE+V P PE ++ + +P +G++L+GPPGTGK +LA+AVA +
Sbjct: 378 WSDIAGLDDAKNSLKEAVIYPFLRPELFQGLR-EPVQGMLLFGPPGTGKTMLARAVATEA 436
Query: 618 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGER 439
ATF + S L KYLGD KLVR LF VA+ S++F+DEID++ + R D SG E
Sbjct: 437 KATFFSISASSLTSKYLGDSEKLVRALFEVAKRQTCSVIFVDEIDSILSARND--SGNEH 494
Query: 438 EIQRTM-LELLNQLDGFDSRGD---------VKVIMATNRIETLDPALIRPGRIDRKIEF 289
E R + E L Q + V V+ ATN +D A R R ++
Sbjct: 495 ESSRRLKTEFLIQWSSLTNAAPDKQTGHSPRVLVLAATNLPWCIDEAARR--RFVKRTYI 552
Query: 288 PLPDEKTKRRIFT--IHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALR 124
PLP+++T+ + + +H L ++ +L EL+ + SG+DI A+ +A + LR
Sbjct: 553 PLPEKETRYKHLSHLLHNQVHCLTEE-DLEELVNLTEGYSGSDITALAKDAAMGPLR 608
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 122 bits (293), Expect = 8e-29
Identities = 82/237 (34%), Positives = 130/237 (54%), Gaps = 14/237 (5%)
Frame = -2
Query: 792 DIGGLDTQIQEIKESVELPXTHPEYYEEMGIKPPKGVILYGPPGTGKPLLAKAVANQTSA 613
DI GL+ +KE+V P P+ ++ + +P +G++L+GPPGTGK +LA+AVA ++ +
Sbjct: 460 DISGLEFAKHSLKEAVVYPFLRPDLFQGLR-EPARGMLLFGPPGTGKTMLARAVATESRS 518
Query: 612 TFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREI 433
F + S L K+LG+ KLVR LF +A++ +PSI+F+DEID++ + R S+ G E E
Sbjct: 519 VFFSISASSLTSKFLGESEKLVRALFTLAKKLSPSIIFVDEIDSLLSAR--SSDGNEHET 576
Query: 432 QRTM-LELLNQLDGF----DSRGD-----VKVIMATNRIETLDPALIRPGRIDRKIEFPL 283
R + E L Q SR V V+ ATN +D A R R R+ PL
Sbjct: 577 SRRIKTEFLIQWSSLARAAASRQTADHPRVLVLAATNLPWCIDDAARR--RFVRRTYIPL 634
Query: 282 PDEKTKR----RIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALR 124
PDE T+R + ++L D + ++ + + SG+D+ A+ +A + LR
Sbjct: 635 PDETTRRLHLNNLLKYQKHSLSLED---IEAIVKATEYYSGSDLTALAKDAAMGPLR 688
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 75.4 bits (177), Expect = 9e-15
Identities = 58/181 (32%), Positives = 89/181 (49%), Gaps = 1/181 (0%)
Frame = -2
Query: 723 EYYEEMGIKPPKGVILYGPPGTGKPLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 544
++Y+ GI +G +LYGPPG+GK A+A + + L +K L D +L
Sbjct: 232 QWYDTRGIPYRRGYLLYGPPGSGKTSFLYALAGELDYDICVL---NLAEKGLTDD-RLNH 287
Query: 543 ELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVI 364
L V + ++V ++++D+ R S G T LLN LDG S + +
Sbjct: 288 LLSNVPPK---AVVLLEDVDSAFQGRERSGEVGFHA-NVTFSGLLNALDGVTSSDERIIF 343
Query: 363 MATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFT-IHTSRMTLADDVNLSELIMSK 187
M TN E LDPAL+RPGR+D K + R +FT + +ADD LS+++ K
Sbjct: 344 MTTNHPEKLDPALVRPGRVDVKAYLGNATPEQVREMFTRFYGHSPEMADD--LSDIVCPK 401
Query: 186 D 184
+
Sbjct: 402 N 402
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 39.1 bits (87), Expect = 7e-04
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 13/141 (9%)
Frame = -2
Query: 705 GIKPPKGVILYGPPGTGKPLLAKAVANQTSATFLRV-VG-----SEL---IQKYLGDGP- 556
G K + L GPPG GK + K++A+ + F R VG +E+ + Y+G P
Sbjct: 567 GTMQGKIMCLVGPPGVGKTSVGKSIASALNREFFRFSVGGLTDVAEIKGHRRTYIGAMPG 626
Query: 555 KLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREI---QRTMLELLNQLDGFDS 385
K+V+ L +V E+ ++ IDEID VG + E+ ++ L +D
Sbjct: 627 KIVQALKKVQTEN--PLILIDEIDKVGKSHQGDPASALLELLDSEQNSAFLDYYMDIPLD 684
Query: 384 RGDVKVIMATNRIETLDPALI 322
V + N I+T+ P L+
Sbjct: 685 VSSVLFVCTANTIDTIPPPLL 705
>SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 30.7 bits (66), Expect = 0.25
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = -2
Query: 690 KGVILYGPPGTGKPLLAKAVANQ--TSATFLRVVGSEL 583
KGV+ G GTGK LA A+A + F +VGSE+
Sbjct: 65 KGVLFAGGAGTGKTALALAIAQELGPKVPFCPMVGSEV 102
>SPCC1442.07c |||ubiquitin/metalloprotease fusion
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 282
Score = 30.7 bits (66), Expect = 0.25
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = -2
Query: 534 RVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMAT 355
++ + H ++ + E+D R+DS + G Q +EL + D +D D K + +T
Sbjct: 140 KIMDSHRWTVPLLSEMDPAEHTRHDSKTLGLNHNQGAHIELRLRTDRYDGFRDYKTVKST 199
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 30.3 bits (65), Expect = 0.33
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 696 PPKGVILYGPPGTGKPLLAKAVANQTSA-TFLRVVG 592
PP V + GPPGTGK L K++ + S T ++ G
Sbjct: 73 PPVIVAVMGPPGTGKSTLIKSLVRRYSKYTISQITG 108
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 29.5 bits (63), Expect = 0.58
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -2
Query: 699 KPPKGVILYGPPGTGKPLLAKAVAN---QTSATFLRVVGSELIQKY 571
+P + GP GTGK LL KA+A+ +R+ SE ++K+
Sbjct: 612 QPIASFLFCGPSGTGKTLLTKALASFMFDDENAMIRIDMSEYMEKH 657
Score = 29.1 bits (62), Expect = 0.77
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 13/126 (10%)
Frame = -2
Query: 681 ILYGPPGTGKPLLAKAV----------ANQTSATFLRV-VGSELI-QKYLGDGPKLVREL 538
+L G PG GK +A+ + AN ++ L + VGS + K+ G+ + ++ +
Sbjct: 206 VLIGEPGVGKTSIAEGLARRIIDDDVPANLSNCKLLSLDVGSLVAGSKFRGEFEERIKSV 265
Query: 537 FR-VAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 361
+ V E P I+F+DE+ + + SGGE ++ N L +RG + I
Sbjct: 266 LKEVEESETPIILFVDEMHLL----MGAGSGGEGG-----MDAANLLKPMLARGKLHCIG 316
Query: 360 ATNRIE 343
AT E
Sbjct: 317 ATTLAE 322
>SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 504
Score = 29.5 bits (63), Expect = 0.58
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 684 VILYGPPGTGKPLLAKAVANQTSATFLRV 598
+IL+G GTGK LA+ +A T + F+ +
Sbjct: 123 MILWGSAGTGKTTLARLIAVTTKSRFIEI 151
>SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex
subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 342
Score = 29.1 bits (62), Expect = 0.77
Identities = 38/175 (21%), Positives = 72/175 (41%), Gaps = 3/175 (1%)
Frame = -2
Query: 684 VILYGPPGTGKPLLAKAVANQTSATFLRVVGSELIQKYLGD--GPKLVRELFRVAEEHAP 511
++ YGPPGTGK A A + R ++L++ D G VRE ++ +
Sbjct: 59 MLFYGPPGTGKTSTILACARKIYGPNYR---NQLMELNASDDRGIDAVRE--QIKNFAST 113
Query: 510 SIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDP 331
+F + D+ + + R ++E + +V+ + N I + P
Sbjct: 114 RQIFASTFKMIILDEADAMTLAAQNALRRVIEKYTK--------NVRFCIICNYINKISP 165
Query: 330 ALIRPGRIDRKIEFPLPDEKTKRRI-FTIHTSRMTLADDVNLSELIMSKDDLSGA 169
A+ R R PLP ++ ++ + I + + D ++ L +SK D+ A
Sbjct: 166 AI--QSRCTRFRFQPLPPKEIEKTVDHVIQSEHCNIDPDAKMAVLRLSKGDMRKA 218
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 28.7 bits (61), Expect = 1.0
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -2
Query: 684 VILYGPPGTGKPLLAKAVANQTSATFLRVVGSEL--IQKYLG 565
+++ GP +GK + + VA +T F+R+ E +Q+Y+G
Sbjct: 897 ILIQGPTSSGKTSMIEYVAKKTGHKFVRINNHEHTDLQEYIG 938
Score = 28.3 bits (60), Expect = 1.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 690 KGVILYGPPGTGKPLLAKAVANQTSATFLRV 598
K ++L G PG GK L A+A +T +R+
Sbjct: 1560 KPILLEGSPGVGKTSLITALARETGHQLVRI 1590
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 28.3 bits (60), Expect = 1.3
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 326 SAGSKVSIRFVAMITFTSPLESKPSS*FNNSNMVL*ISLSPPEFE-S*RLVPTASISSMK 502
++ S VS++ + + +SP+ S + + S L S++P + L+P++S
Sbjct: 546 TSNSSVSLQTSSSLIISSPIISSSLTATSTSTPALTHSITPSNTSYTSSLIPSSSTDYSS 605
Query: 503 TIEGACSSATRNSSRTNL 556
++ CS+ T S T+L
Sbjct: 606 SLITVCSNVTSEISSTSL 623
>SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 175
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 684 VILYGPPGTGKPLLAKAVANQT 619
+I+ G PGTGK LA+ VA T
Sbjct: 11 IIICGTPGTGKTTLAEQVAETT 32
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 27.9 bits (59), Expect = 1.8
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = -3
Query: 731 HIRNTMKKWESNLPKESSCTVLRALVNHSWPRLLQIRHLLPSYV*LDLNLY 579
HI N ++W S +++ L + W ++ + P Y+ DL LY
Sbjct: 152 HIANWPQQWASYHATKAAVKHLARALAVEWAPFARVNSVSPGYIDTDLTLY 202
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -2
Query: 684 VILYGPPGTGKP-LLAKAVANQTSATFLRVVGSELIQKYLGDG 559
++L GP GTGK LL + V NQ VG + + + G
Sbjct: 12 IVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVG 54
>SPBPB10D8.02c |||arylsulfatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 554
Score = 27.1 bits (57), Expect = 3.1
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Frame = -2
Query: 588 ELIQKYLG---DGPKLVRELFRVAEEHA---PSIVFIDEIDAVGTKRYDSNSGGEREIQR 427
E I KY G +GP ++R+ A++ P V +D +GTK +D + E+E
Sbjct: 228 EYINKYRGRYSEGPDVLRKNRLQAQKDLGLIPENVIPAPVDGMGTKSWDELTTEEKEFSA 287
Query: 426 TMLEL 412
+E+
Sbjct: 288 RTMEV 292
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 26.6 bits (56), Expect = 4.1
Identities = 37/166 (22%), Positives = 70/166 (42%), Gaps = 3/166 (1%)
Frame = +2
Query: 65 YRTLSFDFLKSSFVTFIRRSLSAMRPASVHIALISAPERSSFDIISSDKFTSSANVILDV 244
Y T SF L SS ++ S S++ P S+ I S P S +SS + S N+
Sbjct: 223 YNTSSF--LPSSVISSASLSSSSVLPTSI-ITSTSTPVTVSSSSLSSFTPSYSTNLTTTG 279
Query: 245 *MVKILLLVFSSG---KGNSIFLSIRPGRISAGSKVSIRFVAMITFTSPLESKPSS*FNN 415
SS +S+ + P +S+ + S + +T ++ + + +
Sbjct: 280 STTTTGSATVSSSPFYSNSSVIPTSVPSSVSSFTSSSSSYTTTLTASNTSVTYTGTGTGS 339
Query: 416 SNMVL*ISLSPPEFES*RLVPTASISSMKTIEGACSSATRNSSRTN 553
+ + SPP + + ++PT+ SS+ + + SS T + +N
Sbjct: 340 ATF----TSSPPFYSNSSVIPTSVPSSVSSFTSSNSSYTTTLTASN 381
>SPBC216.06c |swi1||replication fork protection complex subunit
Swi1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 971
Score = 26.6 bits (56), Expect = 4.1
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = -2
Query: 273 KTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNED 94
KT I HT+R + + ++ I+ DD S DI +EA ALRE+ + +
Sbjct: 890 KTNETIID-HTTRKKKENHLRSAKYIVDSDDDSETDIAFFQSEA---ALREKNAQKASAL 945
Query: 93 FKK 85
FK+
Sbjct: 946 FKR 948
>SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 465
Score = 26.6 bits (56), Expect = 4.1
Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Frame = -2
Query: 690 KGVILYGPPGTGKPLLAKAVANQ--TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEH 517
+ +++ GPP TGK +A +A + F+ + SE+ + L++ L +
Sbjct: 66 RAILMAGPPSTGKTAIAMGMAQSLGSDTPFVTLSASEVYSLEMSKTEALLQALRKSIGVR 125
Query: 516 APSIVFIDEIDAVGTKRYDSNSGGEREIQRTM 421
I E + V + S +GG ++ + T+
Sbjct: 126 IKEETEIIEGEVVEVQIDRSITGGNKQGKLTI 157
>SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 486
Score = 26.6 bits (56), Expect = 4.1
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 85 FLEVLICYFHTALSKCHETSFSTYCLNISTRKIIF*HNKFRQV 213
FL + +H + KC ETS +C+ + R HN+ R++
Sbjct: 268 FLHIFELRYHIMIKKCLETS-KRFCIAMPLRARSDGHNEHREL 309
>SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit
Swi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 725 RNTMKKWESNLPKESSCTVLRALVNHSWPRLLQIRH 618
+NT+ E+N P S+ + +L+N S P L H
Sbjct: 505 KNTILSNENNTPNYSNVCLSTSLINRSLPSLKSTMH 540
>SPAC1F3.09 |mug161||CwfJ family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 561
Score = 26.2 bits (55), Expect = 5.4
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +2
Query: 485 SISSMKTIEGACSSATRNSSRTNLGPSPKYFCISS 589
S S++ + + S + N+ R+ +GP +FC+S+
Sbjct: 319 SHSALNNLHKSESGTSLNNRRSKVGPGSCFFCLSN 353
>SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 420
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 616 RCLICNSLGQEWFTSARRTVQDDSFG 693
+CL C +LG+ ++ QD S+G
Sbjct: 64 KCLACENLGKVMINHSKELPQDSSYG 89
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 26.2 bits (55), Expect = 5.4
Identities = 46/177 (25%), Positives = 71/177 (40%)
Frame = +2
Query: 35 SPSGVPSFLRYRTLSFDFLKSSFVTFIRRSLSAMRPASVHIALISAPERSSFDIISSDKF 214
S S PS + RT S F+ SS T P+S + S+P SS SS K
Sbjct: 129 STSIAPSMIGTRTSSSYFITSSSST----------PSSSSSSSSSSPSSSSSKSSSSSKS 178
Query: 215 TSSANVILDV*MVKILLLVFSSGKGNSIFLSIRPGRISAGSKVSIRFVAMITFTSPLESK 394
+SS++ SS +S S P + SK S + IT T+P S
Sbjct: 179 SSSSSSSSKSSSSSSSSSKSSSSSSSSSKSSASPSSSKSSSKFSSS--SFITSTTPASSS 236
Query: 395 PSS*FNNSNMVL*ISLSPPEFES*RLVPTASISSMKTIEGACSSATRNSSRTNLGPS 565
S +V + + S T+S+SS+ + + SA+ +S+ ++ S
Sbjct: 237 SS-----GAIVSNAKTASTDDSSSASSATSSVSSVVSSASSALSASASSASASVSSS 288
>SPAC1952.10c |||conserved fungal protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 225 LMSFLMYEW*KSFSWFSRQARG 290
L+SFL+Y+ K+F W Q G
Sbjct: 172 LLSFLVYKMNKAFGWIMYQQHG 193
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.8 bits (54), Expect = 7.2
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = -2
Query: 699 KPPKGVILYGPPGTGKPLLAKAVAN---QTSATFLRVVGSELIQKY 571
+P + GP G GK L KA+A T +R SE +K+
Sbjct: 530 RPLASFLFLGPTGVGKTALTKALAEFLFDTDKAMIRFDMSEFQEKH 575
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 539 CSVLLRNMHLQLFSLMKLMQWALNVM 462
C++L RN+HL+ FS LNV+
Sbjct: 4084 CNILYRNVHLEEFSWGTFKDLLLNVV 4109
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 25.4 bits (53), Expect = 9.5
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = -2
Query: 204 ELIMSKDDLSGADIKAICTEAGLMALRER----RMKVTNEDFKKSKESVLYRKKEGTPEG 37
+L + + + K+ E+ L L E R+K NED +K++ L RK E E
Sbjct: 35 QLSLKEQEYESLSRKSEAAESQLEELEEETKQLRLKADNEDIQKTEAEQLSRKVELLEEE 94
Query: 36 L 34
L
Sbjct: 95 L 95
>SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 193
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = -2
Query: 681 ILYGPPGTGKPLLAKAVANQTSATFL 604
++ GP G+GK +AKAV+ + ++
Sbjct: 18 VVIGPAGSGKTTMAKAVSEKLGFEYI 43
>SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription factor
Grt1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 648
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -2
Query: 474 TKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIET 340
+K+Y NS + M +L FD D K TNR ET
Sbjct: 574 SKKYQDNSVNNTYFDKVMQHVLVHSPAFDDSSDPK--FETNRSET 616
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,612,872
Number of Sequences: 5004
Number of extensions: 79977
Number of successful extensions: 344
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 309
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 388424860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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