Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt18a04
(770 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical ... 43 2e-04
AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical ... 43 2e-04
Z81524-4|CAB04250.1| 528|Caenorhabditis elegans Hypothetical pr... 35 0.056
Z49909-6|CAA90109.1| 214|Caenorhabditis elegans Hypothetical pr... 35 0.056
AY303579-1|AAP57301.1| 214|Caenorhabditis elegans cell death-re... 35 0.056
AL161712-10|CAC35900.1| 533|Caenorhabditis elegans Hypothetical... 34 0.13
AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical... 33 0.23
U80931-7|AAB38003.2| 526|Caenorhabditis elegans Organic anion t... 33 0.30
AF152095-1|AAF73198.1| 526|Caenorhabditis elegans multispecific... 33 0.30
U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical pr... 32 0.39
AC090999-19|AAK26156.1| 575|Caenorhabditis elegans Hypothetical... 32 0.52
Z79602-1|CAB01888.3| 508|Caenorhabditis elegans Hypothetical pr... 31 0.69
CU457741-8|CAM36349.1| 544|Caenorhabditis elegans Hypothetical ... 31 0.69
AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical ... 31 0.69
Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical p... 31 1.2
Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z47070-1|CAA87340.1| 516|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z92834-1|CAB07382.1| 564|Caenorhabditis elegans Hypothetical pr... 29 2.8
U29377-2|AAA68713.4| 627|Caenorhabditis elegans Hypothetical pr... 29 2.8
U29377-1|AAZ94294.1| 773|Caenorhabditis elegans Hypothetical pr... 29 2.8
U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical pr... 29 3.7
AC006708-12|AAT81173.1| 908|Caenorhabditis elegans Hypothetical... 29 3.7
AC006708-11|AAF60426.2| 1019|Caenorhabditis elegans Hypothetical... 29 3.7
Z48638-6|CAA88567.1| 541|Caenorhabditis elegans Hypothetical pr... 29 4.8
AF022973-2|AAC25800.2| 527|Caenorhabditis elegans Hypothetical ... 29 4.8
AF022973-1|AAT81194.1| 513|Caenorhabditis elegans Hypothetical ... 29 4.8
Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical p... 28 8.5
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 28 8.5
>Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/123 (23%), Positives = 58/123 (47%), Gaps = 6/123 (4%)
Frame = -2
Query: 769 VSGVIVNRVGKKPLLIAAGVITTAITLSVQWAN-----SKAAIVSLFAIDTAVGQVLLSL 605
+ ++++R+G++ ++ + + T + L W S+ A++ L AV V ++
Sbjct: 394 IVALLIDRLGRR-IMYSGAIFTAGMLLLASWLTHDLIPSQYAVIMLMVAKGAVS-VAYTV 451
Query: 604 NQALTVELFPTTTRTLAISMIMVAGRIGTLTAN-VAFPVLLDMGCGVPFFTLTGMVMCVT 428
T ELFPT R A+ R G ++A+ +AF ++ G V T + +C +
Sbjct: 452 MYTYTSELFPTVIRNTAVGCCSTIARFGAISASFIAFFLVDRFGRIVMIIPFTILALCAS 511
Query: 427 AIS 419
+S
Sbjct: 512 IVS 514
>Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/123 (23%), Positives = 58/123 (47%), Gaps = 6/123 (4%)
Frame = -2
Query: 769 VSGVIVNRVGKKPLLIAAGVITTAITLSVQWAN-----SKAAIVSLFAIDTAVGQVLLSL 605
+ ++++R+G++ ++ + + T + L W S+ A++ L AV V ++
Sbjct: 360 IVALLIDRLGRR-IMYSGAIFTAGMLLLASWLTHDLIPSQYAVIMLMVAKGAVS-VAYTV 417
Query: 604 NQALTVELFPTTTRTLAISMIMVAGRIGTLTAN-VAFPVLLDMGCGVPFFTLTGMVMCVT 428
T ELFPT R A+ R G ++A+ +AF ++ G V T + +C +
Sbjct: 418 MYTYTSELFPTVIRNTAVGCCSTIARFGAISASFIAFFLVDRFGRIVMIIPFTILALCAS 477
Query: 427 AIS 419
+S
Sbjct: 478 IVS 480
>AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/123 (23%), Positives = 58/123 (47%), Gaps = 6/123 (4%)
Frame = -2
Query: 769 VSGVIVNRVGKKPLLIAAGVITTAITLSVQWAN-----SKAAIVSLFAIDTAVGQVLLSL 605
+ ++++R+G++ ++ + + T + L W S+ A++ L AV V ++
Sbjct: 394 IVALLIDRLGRR-IMYSGAIFTAGMLLLASWLTHDLIPSQYAVIMLMVAKGAVS-VAYTV 451
Query: 604 NQALTVELFPTTTRTLAISMIMVAGRIGTLTAN-VAFPVLLDMGCGVPFFTLTGMVMCVT 428
T ELFPT R A+ R G ++A+ +AF ++ G V T + +C +
Sbjct: 452 MYTYTSELFPTVIRNTAVGCCSTIARFGAISASFIAFFLVDRFGRIVMIIPFTILALCAS 511
Query: 427 AIS 419
+S
Sbjct: 512 IVS 514
>AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/123 (23%), Positives = 58/123 (47%), Gaps = 6/123 (4%)
Frame = -2
Query: 769 VSGVIVNRVGKKPLLIAAGVITTAITLSVQWAN-----SKAAIVSLFAIDTAVGQVLLSL 605
+ ++++R+G++ ++ + + T + L W S+ A++ L AV V ++
Sbjct: 360 IVALLIDRLGRR-IMYSGAIFTAGMLLLASWLTHDLIPSQYAVIMLMVAKGAVS-VAYTV 417
Query: 604 NQALTVELFPTTTRTLAISMIMVAGRIGTLTAN-VAFPVLLDMGCGVPFFTLTGMVMCVT 428
T ELFPT R A+ R G ++A+ +AF ++ G V T + +C +
Sbjct: 418 MYTYTSELFPTVIRNTAVGCCSTIARFGAISASFIAFFLVDRFGRIVMIIPFTILALCAS 477
Query: 427 AIS 419
+S
Sbjct: 478 IVS 480
>Z81524-4|CAB04250.1| 528|Caenorhabditis elegans Hypothetical
protein F32H5.4 protein.
Length = 528
Score = 35.1 bits (77), Expect = 0.056
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = -2
Query: 658 IVSLFAIDTAVGQVLLSLNQALTVELFPTTTRTLAISMIMVAGRIGTLTANVAFPVLLDM 479
+ +L A TA QV ++ + L +E +PT R A+S A RIGT+ F +L
Sbjct: 419 VATLLASATA-SQVFITKSMVL-MEFYPTVIRNSAVSFKSSASRIGTILGPQLF--ILCP 474
Query: 478 GCGVPFFTLTGMVMC-VTAISLFLPSAK 398
+P+ LTG + A L LP K
Sbjct: 475 YKSLPYAILTGFCLFDAIAFQLRLPETK 502
>Z49909-6|CAA90109.1| 214|Caenorhabditis elegans Hypothetical
protein C14A4.5 protein.
Length = 214
Score = 35.1 bits (77), Expect = 0.056
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = -2
Query: 610 SLNQALTVELFPTTTRTLAISMIMVAGRIGTLTANVAFPVLLDMGCGVPFFTL-TGMVMC 434
+L+ A+ +ELFP TT ++ + I G +G + N A LLD G+PF T+ G+++
Sbjct: 76 TLSNAINLELFPHTTISVTVHGIQDDGSMGAVAINGACFALLDN--GMPFETVFCGVLIV 133
Query: 433 VTAISLFL-PSAKK 395
L + P+AK+
Sbjct: 134 RVKDELIIDPTAKQ 147
>AY303579-1|AAP57301.1| 214|Caenorhabditis elegans cell
death-related nuclease 5 protein.
Length = 214
Score = 35.1 bits (77), Expect = 0.056
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = -2
Query: 610 SLNQALTVELFPTTTRTLAISMIMVAGRIGTLTANVAFPVLLDMGCGVPFFTL-TGMVMC 434
+L+ A+ +ELFP TT ++ + I G +G + N A LLD G+PF T+ G+++
Sbjct: 76 TLSNAINLELFPHTTISVTVHGIQDDGSMGAVAINGACFALLDN--GMPFETVFCGVLIV 133
Query: 433 VTAISLFL-PSAKK 395
L + P+AK+
Sbjct: 134 RVKDELIIDPTAKQ 147
>AL161712-10|CAC35900.1| 533|Caenorhabditis elegans Hypothetical
protein Y66D12A.13 protein.
Length = 533
Score = 33.9 bits (74), Expect = 0.13
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = -2
Query: 655 VSLFAIDTAVGQVLLSLNQALTVELFPTTTRTLAISMIMVAGRIGTLTANVAFPVLLDMG 476
++L A T G + L L +T E+FPT R +A + I V GR+G + + F L G
Sbjct: 417 LTLLAFGTT-GCLFLQL-LLITAEMFPTGIRNIASAHINVCGRLGNVFGPMVFSYKL--G 472
Query: 475 CGVPFFTLTGMV--MCVTAISLFLPSAK 398
+ + G++ + V +F+P K
Sbjct: 473 FAGSGYLILGVICLLDVIVFHIFIPETK 500
>AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical
protein Y51A2D.18 protein.
Length = 550
Score = 33.1 bits (72), Expect = 0.23
Identities = 21/112 (18%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Frame = -2
Query: 730 LLIAAGVITTAITLSVQWANSKAAIVSLFAIDTAVGQVLLSLNQALTVELFPTTTRTLAI 551
++++ ++ + L + +S+ + Q+ ++ + ++ ELFPT RT+
Sbjct: 403 IVLSLSLVVGSYALHLNHEMKDVIRISILLASSMTSQIYIA-DGIVSAELFPTPIRTIGY 461
Query: 550 SMIMVAGRIGTLTANVAFPVLLDMGCGVPF-FTLTGMVMCVTAISLFLPSAK 398
+ + + R+G + + F L D +PF F + ++ + LP K
Sbjct: 462 AFLQLWNRVGVVLSPFIF-YLADYWLALPFCFMILFSLIDTFSFECLLPETK 512
>U80931-7|AAB38003.2| 526|Caenorhabditis elegans Organic anion
transporter protein 1 protein.
Length = 526
Score = 32.7 bits (71), Expect = 0.30
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = -2
Query: 586 ELFPTTTRTLAISMIMVAGRIGTLTANVAFPVLLDMGCGVPFFTLTG-MVMCVTAISLFL 410
EL+PT R LA+S + R+G + + F L D+ +P+ L G ++ + + +
Sbjct: 444 ELYPTAVRNLAVSAVSTMSRVGGMFSPQLF-YLSDIAEWIPYAVLVGFQLVDLVLFCITI 502
Query: 409 PSAK 398
P K
Sbjct: 503 PETK 506
>AF152095-1|AAF73198.1| 526|Caenorhabditis elegans multispecific
organic anion transporterprotein.
Length = 526
Score = 32.7 bits (71), Expect = 0.30
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = -2
Query: 586 ELFPTTTRTLAISMIMVAGRIGTLTANVAFPVLLDMGCGVPFFTLTG-MVMCVTAISLFL 410
EL+PT R LA+S + R+G + + F L D+ +P+ L G ++ + + +
Sbjct: 444 ELYPTAVRNLAVSAVSTMSRVGGMFSPQLF-YLSDIAEWIPYAVLVGFQLVDLVLFCITI 502
Query: 409 PSAK 398
P K
Sbjct: 503 PETK 506
>U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical
protein F23F12.3 protein.
Length = 522
Score = 32.3 bits (70), Expect = 0.39
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = -2
Query: 661 AIVSLFAIDTAVGQVLLSLNQALTVELFPTTTRTLAISMIMVAGRIGTLTANVAFPVLLD 482
AI+ + I T+ ++ + E+FPT RT+ I + RIG L A L +
Sbjct: 404 AIIIINIIGTSFIELTWDACYLVAAEIFPTRIRTIGIGTCSLLARIGALLA-PQMAYLSE 462
Query: 481 MGCGVPFFTLTGMVMCVTAIS-LFLPSAK 398
+ +P+ + + + IS FLP K
Sbjct: 463 IYPPIPYIIVCSIGIISLLISCFFLPDTK 491
>AC090999-19|AAK26156.1| 575|Caenorhabditis elegans Hypothetical
protein Y82E9BR.16a protein.
Length = 575
Score = 31.9 bits (69), Expect = 0.52
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Frame = -2
Query: 760 VIVNRVGKKPLLIAAGVITTAITLSVQWANSK-----AAIVSLFAIDTAVGQVLLSLNQA 596
++++R+G++ L++A G+ L V W AI + ++ V ++
Sbjct: 416 LLIDRIGRR-LILAGGLFIAGACLLVNWLMGDNVQLWMAITQMAFTKGSITGVYAAI-YT 473
Query: 595 LTVELFPTTTRTLAISMIMVAGRIGTLTAN 506
+ ELFPT R A+ R+G + A+
Sbjct: 474 YSPELFPTVIRNTAMGFCSTIARVGAIAAS 503
>Z79602-1|CAB01888.3| 508|Caenorhabditis elegans Hypothetical
protein K09E9.1 protein.
Length = 508
Score = 31.5 bits (68), Expect = 0.69
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = -2
Query: 607 LNQALTVELFPTTTRTLAISMIMVAGRIGTLTANVAFPVLLDMGCGVP--FFTLTGMVMC 434
+N + ELFPT+ R++A + GR+G++ A + L G +P F + +
Sbjct: 429 INHLYSAELFPTSVRSMARGVCNAGGRLGSVMAPM-IVYLRTFGFFIPNAIFAVLLFIQL 487
Query: 433 VTAISLFLP 407
V I +FLP
Sbjct: 488 V-VIVIFLP 495
>CU457741-8|CAM36349.1| 544|Caenorhabditis elegans Hypothetical
protein C42C1.8 protein.
Length = 544
Score = 31.5 bits (68), Expect = 0.69
Identities = 13/65 (20%), Positives = 33/65 (50%)
Frame = -2
Query: 616 LLSLNQALTVELFPTTTRTLAISMIMVAGRIGTLTANVAFPVLLDMGCGVPFFTLTGMVM 437
++ L ++ FP + RT+A ++ ++A +G + N+ P+++ V + ++
Sbjct: 197 IMFLPSKISATCFPPSQRTIATTIGVMANPLGVMVVNLVAPLIVQSSDDVWILNVILFII 256
Query: 436 CVTAI 422
C A+
Sbjct: 257 CFVAL 261
>AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical
protein Y39D8B.1 protein.
Length = 1372
Score = 31.5 bits (68), Expect = 0.69
Identities = 23/89 (25%), Positives = 41/89 (46%)
Frame = -2
Query: 727 LIAAGVITTAITLSVQWANSKAAIVSLFAIDTAVGQVLLSLNQALTVELFPTTTRTLAIS 548
L+ + V+ +T S S IV + + G V+LS + V + P + +S
Sbjct: 646 LVLSSVVNDPVTASQSLILSPILIVPIIFSPSIYGNVILSPWIFVPVLVSPRILGAVILS 705
Query: 547 MIMVAGRIGTLTANVAFPVLLDMGCGVPF 461
++++ I LT P++L G G+PF
Sbjct: 706 PVIMSPAI--LTPLCMVPIILSPGVGLPF 732
>Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical
protein Y57G11C.23 protein.
Length = 532
Score = 30.7 bits (66), Expect = 1.2
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Frame = -2
Query: 745 VGKKPLLIAAGVITTA--IT-LSVQWANSKAAIVSLFAIDTA-VGQVLLSLNQALTV-EL 581
+G++ L I++ +I IT L+ W +K + A A GQ L L++ EL
Sbjct: 354 LGRRCLFISSQIIAILAYITILTALWTRNKVSWWYTVAYILAYAGQSLCLETCYLSLAEL 413
Query: 580 FPTTTRTLAISMIMVAGRIGTLTANVAFPV 491
PT RT++ +++ + +IGT+ A+ P+
Sbjct: 414 MPTDVRTISGALMNILMKIGTILASTTKPI 443
>Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical
protein C53B4.1 protein.
Length = 517
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/73 (28%), Positives = 31/73 (42%)
Frame = -2
Query: 709 ITTAITLSVQWANSKAAIVSLFAIDTAVGQVLLSLNQALTVELFPTTTRTLAISMIMVAG 530
I I L + W S +S + + A + L VEL PT R A S +
Sbjct: 379 ICILICLYLNWKGS-FLYLSAYTLAYATQSLCLEAAYLSLVELMPTDVRATAGSTANICM 437
Query: 529 RIGTLTANVAFPV 491
+IGT+ A + P+
Sbjct: 438 KIGTILATLTKPL 450
>Z47070-1|CAA87340.1| 516|Caenorhabditis elegans Hypothetical
protein T09B9.2 protein.
Length = 516
Score = 30.3 bits (65), Expect = 1.6
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = -2
Query: 769 VSGVIVNRVGKKPLLIAAG--VITTAITLSVQWANSKAAIVSLFAIDTAVGQVLLS-LNQ 599
++G +R+ K ++AA +I + L + A + A+V + T G LLS +
Sbjct: 100 ITGWQADRLNGKWTIVAAMAFIIVSNAVLPIS-AGASFALVFFLRVLTGFGDALLSPASS 158
Query: 598 ALTVELFPTTTRTLAISMIMVAGRIGTL 515
+L FP R A+ ++ +IGTL
Sbjct: 159 SLITRWFPPKERPSALGIVTSGRQIGTL 186
>Z92834-1|CAB07382.1| 564|Caenorhabditis elegans Hypothetical
protein F39B2.1 protein.
Length = 564
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +2
Query: 446 SGQREKWYSAAHIKENRERHIRC*GTDPPSHHYHRNSQRSSSCRKQLNCQGLIQAQQNLT 625
S Q +Y++ I E RH T PP HH+H + + Q + +I +Q + +
Sbjct: 20 SSQHPPYYNSFGIAEPDPRHNLYAPTAPPHHHHHHHQH-----QPQQHLHYMIDSQDSDS 74
Query: 626 HSCIDS 643
+DS
Sbjct: 75 QDSVDS 80
>U29377-2|AAA68713.4| 627|Caenorhabditis elegans Hypothetical
protein K05F1.6b protein.
Length = 627
Score = 29.5 bits (63), Expect = 2.8
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
Frame = -2
Query: 727 LIAAGVITTAITLSVQWANSKAAIVSLFAIDTAVGQVLLSLNQALTVELFPTTTRTLAIS 548
LI +G+ LS+ + A+ ++ AV Q ++ T EL+PT R A+
Sbjct: 410 LITSGLFIIVAMLSMVSGHYMLALAFMYFGKIAV-QGAFNILYIFTSELYPTVVRNTAVG 468
Query: 547 MIMVAGRIGT-------LTANVAFPVLLDMGCGVPFFTLTGMVMCV 431
+ + R G+ L +N++ P+ + M F GM++ V
Sbjct: 469 VTSMVARFGSGLSSYIALLSNISLPI-VPMIIFAVFSLFAGMLVFV 513
>U29377-1|AAZ94294.1| 773|Caenorhabditis elegans Hypothetical
protein K05F1.6a protein.
Length = 773
Score = 29.5 bits (63), Expect = 2.8
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
Frame = -2
Query: 727 LIAAGVITTAITLSVQWANSKAAIVSLFAIDTAVGQVLLSLNQALTVELFPTTTRTLAIS 548
LI +G+ LS+ + A+ ++ AV Q ++ T EL+PT R A+
Sbjct: 556 LITSGLFIIVAMLSMVSGHYMLALAFMYFGKIAV-QGAFNILYIFTSELYPTVVRNTAVG 614
Query: 547 MIMVAGRIGT-------LTANVAFPVLLDMGCGVPFFTLTGMVMCV 431
+ + R G+ L +N++ P+ + M F GM++ V
Sbjct: 615 VTSMVARFGSGLSSYIALLSNISLPI-VPMIIFAVFSLFAGMLVFV 659
>U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical
protein F23F12.13 protein.
Length = 528
Score = 29.1 bits (62), Expect = 3.7
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Frame = -2
Query: 661 AIVSLFAIDTAVGQVLLSLNQALTVELFPTTTRTLAISMIMVAGRIGTLTANVAFPVLLD 482
AI+ + I + ++ + VE FPT RT+ I + R G L A L D
Sbjct: 392 AIIIINIIGVSFIEITWDACYLVAVECFPTKIRTIGIGTCSLLARTGALLA-PQMAYLSD 450
Query: 481 MGCGVPFFTLTGMVMCVTAIS-LFLPSAK 398
+ P+ + + IS +FLP K
Sbjct: 451 IYRPAPYAVVCSIGTISLLISCVFLPDTK 479
>AC006708-12|AAT81173.1| 908|Caenorhabditis elegans Hypothetical
protein Y110A7A.9b protein.
Length = 908
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 40 SWIPPGLRPWTPARYSTGAKFFTMSNFRPSRRK 138
SW+P G R A +S GA F ++ F P+ K
Sbjct: 143 SWMPTGRRDALFAVHSNGATTFRVTKFEPTEEK 175
>AC006708-11|AAF60426.2| 1019|Caenorhabditis elegans Hypothetical
protein Y110A7A.9a protein.
Length = 1019
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 40 SWIPPGLRPWTPARYSTGAKFFTMSNFRPSRRK 138
SW+P G R A +S GA F ++ F P+ K
Sbjct: 254 SWMPTGRRDALFAVHSNGATTFRVTKFEPTEEK 286
>Z48638-6|CAA88567.1| 541|Caenorhabditis elegans Hypothetical
protein ZK892.3 protein.
Length = 541
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = -2
Query: 586 ELFPTTTRTLAISMIMVAGRIGTLTANVAFPVLLDMGCGVPFFTLTGMVMCVTAISLFLP 407
EL PT R ++ + R+GT+ A++ P+ G+ L + +T + +L
Sbjct: 411 ELIPTDVRVTVAAITNICLRLGTIVASLTKPLKFSFEPGLFLINLIVCSIGITVVYFYLE 470
Query: 406 SAK 398
++
Sbjct: 471 ESR 473
>AF022973-2|AAC25800.2| 527|Caenorhabditis elegans Hypothetical
protein F25G6.7a protein.
Length = 527
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = -2
Query: 766 SGVIVNRVGKKPLLIAAGVITTAITLSVQWANSKA---AIVSLFAIDTAVGQVLLSLNQA 596
+G + ++ K +++ + I + ++ W + AI S F + A + ++N
Sbjct: 125 TGGMADKFNAKYMILVSVAIASLANFTLPWMAPISVYWAIFSRFLVGFADALLQPAMNSL 184
Query: 595 LTVELFPTTTRTLAISMIMVAGRIGTL 515
+T FPT+ R+ A+ + +IGTL
Sbjct: 185 IT-RWFPTSERSYALGLATGGRQIGTL 210
>AF022973-1|AAT81194.1| 513|Caenorhabditis elegans Hypothetical
protein F25G6.7b protein.
Length = 513
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = -2
Query: 766 SGVIVNRVGKKPLLIAAGVITTAITLSVQWANSKA---AIVSLFAIDTAVGQVLLSLNQA 596
+G + ++ K +++ + I + ++ W + AI S F + A + ++N
Sbjct: 111 TGGMADKFNAKYMILVSVAIASLANFTLPWMAPISVYWAIFSRFLVGFADALLQPAMNSL 170
Query: 595 LTVELFPTTTRTLAISMIMVAGRIGTL 515
+T FPT+ R+ A+ + +IGTL
Sbjct: 171 IT-RWFPTSERSYALGLATGGRQIGTL 196
>Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 27.9 bits (59), Expect = 8.5
Identities = 22/125 (17%), Positives = 42/125 (33%)
Frame = -2
Query: 769 VSGVIVNRVGKKPLLIAAGVITTAITLSVQWANSKAAIVSLFAIDTAVGQVLLSLNQALT 590
++ +I+ G+K + + T + + + + L + A T
Sbjct: 388 ITVLIIEWFGRKKTMALEYAVFAIFTFLLYFCLDRFTVTVLIFVARAFISGAFQCAYVYT 447
Query: 589 VELFPTTTRTLAISMIMVAGRIGTLTANVAFPVLLDMGCGVPFFTLTGMVMCVTAISLFL 410
E++PTT R + + RIG + V + +P + SL L
Sbjct: 448 PEVYPTTLRAVGLGTCSAMARIGAIVTPFIAQVASEKSLSLPIGIYGTAAILGLIASLSL 507
Query: 409 PSAKK 395
P K
Sbjct: 508 PIETK 512
>Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 27.9 bits (59), Expect = 8.5
Identities = 22/125 (17%), Positives = 42/125 (33%)
Frame = -2
Query: 769 VSGVIVNRVGKKPLLIAAGVITTAITLSVQWANSKAAIVSLFAIDTAVGQVLLSLNQALT 590
++ +I+ G+K + + T + + + + L + A T
Sbjct: 388 ITVLIIEWFGRKKTMALEYAVFAIFTFLLYFCLDRFTVTVLIFVARAFISGAFQCAYVYT 447
Query: 589 VELFPTTTRTLAISMIMVAGRIGTLTANVAFPVLLDMGCGVPFFTLTGMVMCVTAISLFL 410
E++PTT R + + RIG + V + +P + SL L
Sbjct: 448 PEVYPTTLRAVGLGTCSAMARIGAIVTPFIAQVASEKSLSLPIGIYGTAAILGLIASLSL 507
Query: 409 PSAKK 395
P K
Sbjct: 508 PIETK 512
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 83 YRAGVQGRSPGGIQERRPGG 24
+R G +GRSPGG + R GG
Sbjct: 57 FRGGDRGRSPGGFRGDREGG 76
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,286,504
Number of Sequences: 27780
Number of extensions: 443194
Number of successful extensions: 1210
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1210
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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