Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17p24
(746 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC050411-1|AAH50411.1| 349|Homo sapiens phosphotriesterase rela... 228 2e-59
BC015092-1|AAH15092.1| 349|Homo sapiens phosphotriesterase rela... 228 2e-59
AL360230-2|CAH73146.1| 349|Homo sapiens phosphotriesterase rela... 228 2e-59
AF212237-1|AAK14923.1| 349|Homo sapiens HPHRP protein. 225 2e-58
AL833301-1|CAD91142.1| 1340|Homo sapiens hypothetical protein pr... 31 3.3
AL832455-1|CAD89926.1| 1308|Homo sapiens hypothetical protein pr... 31 3.3
AL832367-1|CAD91157.1| 820|Homo sapiens hypothetical protein pr... 31 3.3
AL832352-1|CAD91149.1| 1337|Homo sapiens hypothetical protein pr... 31 3.3
AL832014-1|CAD91147.1| 1264|Homo sapiens hypothetical protein pr... 31 3.3
AK024726-1|BAB14976.1| 178|Homo sapiens protein ( Homo sapiens ... 31 3.3
AF209502-2|AAL40184.1| 1883|Homo sapiens ZFP106 protein. 31 3.3
AF205632-1|AAG35666.1| 1883|Homo sapiens zinc finger protein 106... 31 3.3
X80818-1|CAA56784.1| 912|Homo sapiens metabotropic glutamate re... 30 7.7
U92457-1|AAB51762.1| 912|Homo sapiens metabotropic glutamate re... 30 7.7
BC130528-1|AAI30529.1| 912|Homo sapiens glutamate receptor, met... 30 7.7
BC130526-1|AAI30527.1| 912|Homo sapiens glutamate receptor, met... 30 7.7
AL590403-1|CAI17348.1| 912|Homo sapiens glutamate receptor, met... 30 7.7
AK131536-1|BAD18673.1| 796|Homo sapiens protein ( Homo sapiens ... 30 7.7
>BC050411-1|AAH50411.1| 349|Homo sapiens phosphotriesterase related
protein.
Length = 349
Score = 228 bits (557), Expect = 2e-59
Identities = 100/207 (48%), Positives = 145/207 (70%)
Frame = -2
Query: 736 TTEQMYHHMLTELTTGFLEEPSVKAGFMGEIASVWPLREFERRAIVAAGELQPQVGCGVS 557
+ EQ+ ++ E+ G + S+K G +GEI WPL E ER+ + A Q Q+GC V
Sbjct: 141 SVEQLTDVLMNEILHG-ADGTSIKCGIIGEIGCSWPLTESERKVLQATAHAQAQLGCPVI 199
Query: 556 FHPHRAIEAPFEIIRLYLEAGGSKDKVVMSHLDRTLLEDDKLLEFSELGTYCQFDLFGVE 377
HP R+ APF+IIR+ EAG K VMSHLDRT+L+ +LLEF++LG Y ++DLFG E
Sbjct: 200 IHPGRSSRAPFQIIRILQEAGADISKTVMSHLDRTILDKKELLEFAQLGCYLEYDLFGTE 259
Query: 376 VSFYQLNPAADMPSDGQRIDKIKLLIDDGKSDKVLMSHDIHTKHRLTAFGGHGYAHIINT 197
+ YQL P DMP D +RI +++LL+++G D++L++HDIHTK RL +GGHGY+HI+
Sbjct: 260 LLHYQLGPDIDMPDDNKRIRRVRLLVEEGCEDRILVAHDIHTKTRLMKYGGHGYSHILTN 319
Query: 196 VLPKMALKGISQDTIDRITIDNPARWL 116
V+PKM L+GI+++ +D+I I+NP +WL
Sbjct: 320 VVPKMLLRGITENVLDKILIENPKQWL 346
>BC015092-1|AAH15092.1| 349|Homo sapiens phosphotriesterase related
protein.
Length = 349
Score = 228 bits (557), Expect = 2e-59
Identities = 100/207 (48%), Positives = 145/207 (70%)
Frame = -2
Query: 736 TTEQMYHHMLTELTTGFLEEPSVKAGFMGEIASVWPLREFERRAIVAAGELQPQVGCGVS 557
+ EQ+ ++ E+ G + S+K G +GEI WPL E ER+ + A Q Q+GC V
Sbjct: 141 SVEQLTDVLMNEILHG-ADGTSIKCGIIGEIGCSWPLTESERKVLQATAHAQAQLGCPVI 199
Query: 556 FHPHRAIEAPFEIIRLYLEAGGSKDKVVMSHLDRTLLEDDKLLEFSELGTYCQFDLFGVE 377
HP R+ APF+IIR+ EAG K VMSHLDRT+L+ +LLEF++LG Y ++DLFG E
Sbjct: 200 IHPGRSSRAPFQIIRILQEAGADISKTVMSHLDRTILDKKELLEFAQLGCYLEYDLFGTE 259
Query: 376 VSFYQLNPAADMPSDGQRIDKIKLLIDDGKSDKVLMSHDIHTKHRLTAFGGHGYAHIINT 197
+ YQL P DMP D +RI +++LL+++G D++L++HDIHTK RL +GGHGY+HI+
Sbjct: 260 LLHYQLGPDIDMPDDNKRIRRVRLLVEEGCEDRILVAHDIHTKTRLMKYGGHGYSHILTN 319
Query: 196 VLPKMALKGISQDTIDRITIDNPARWL 116
V+PKM L+GI+++ +D+I I+NP +WL
Sbjct: 320 VVPKMLLRGITENVLDKILIENPKQWL 346
>AL360230-2|CAH73146.1| 349|Homo sapiens phosphotriesterase related
protein.
Length = 349
Score = 228 bits (557), Expect = 2e-59
Identities = 100/207 (48%), Positives = 145/207 (70%)
Frame = -2
Query: 736 TTEQMYHHMLTELTTGFLEEPSVKAGFMGEIASVWPLREFERRAIVAAGELQPQVGCGVS 557
+ EQ+ ++ E+ G + S+K G +GEI WPL E ER+ + A Q Q+GC V
Sbjct: 141 SVEQLTDVLMNEILHG-ADGTSIKCGIIGEIGCSWPLTESERKVLQATAHAQAQLGCPVI 199
Query: 556 FHPHRAIEAPFEIIRLYLEAGGSKDKVVMSHLDRTLLEDDKLLEFSELGTYCQFDLFGVE 377
HP R+ APF+IIR+ EAG K VMSHLDRT+L+ +LLEF++LG Y ++DLFG E
Sbjct: 200 IHPGRSSRAPFQIIRILQEAGADISKTVMSHLDRTILDKKELLEFAQLGCYLEYDLFGTE 259
Query: 376 VSFYQLNPAADMPSDGQRIDKIKLLIDDGKSDKVLMSHDIHTKHRLTAFGGHGYAHIINT 197
+ YQL P DMP D +RI +++LL+++G D++L++HDIHTK RL +GGHGY+HI+
Sbjct: 260 LLHYQLGPDIDMPDDNKRIRRVRLLVEEGCEDRILVAHDIHTKTRLMKYGGHGYSHILTN 319
Query: 196 VLPKMALKGISQDTIDRITIDNPARWL 116
V+PKM L+GI+++ +D+I I+NP +WL
Sbjct: 320 VVPKMLLRGITENVLDKILIENPKQWL 346
>AF212237-1|AAK14923.1| 349|Homo sapiens HPHRP protein.
Length = 349
Score = 225 bits (549), Expect = 2e-58
Identities = 98/207 (47%), Positives = 144/207 (69%)
Frame = -2
Query: 736 TTEQMYHHMLTELTTGFLEEPSVKAGFMGEIASVWPLREFERRAIVAAGELQPQVGCGVS 557
+ EQ+ ++ E+ G + S+K G +GEI WPL E ER+ + A Q Q+GC V
Sbjct: 141 SVEQLTDVLMNEILHG-ADGTSIKCGIIGEIGCSWPLTESERKVLQATAHAQAQLGCPVI 199
Query: 556 FHPHRAIEAPFEIIRLYLEAGGSKDKVVMSHLDRTLLEDDKLLEFSELGTYCQFDLFGVE 377
HP R+ APF+IIR+ EAG K VMSHLDR +L+ +LLEF++LG Y ++DLFG +
Sbjct: 200 IHPGRSSRAPFQIIRILQEAGADISKTVMSHLDRAILDKKELLEFAQLGCYLEYDLFGTD 259
Query: 376 VSFYQLNPAADMPSDGQRIDKIKLLIDDGKSDKVLMSHDIHTKHRLTAFGGHGYAHIINT 197
+ YQL P DMP D +RI +++LL+++G D++L++HDIHTK RL +GGHGY+HI+
Sbjct: 260 LLHYQLGPDIDMPDDNKRIRRVRLLVEEGCEDRILVAHDIHTKTRLMKYGGHGYSHILTN 319
Query: 196 VLPKMALKGISQDTIDRITIDNPARWL 116
V+PKM L+GI+++ +D+I I+NP +WL
Sbjct: 320 VVPKMLLRGITENVLDKILIENPKQWL 346
>AL833301-1|CAD91142.1| 1340|Homo sapiens hypothetical protein
protein.
Length = 1340
Score = 31.5 bits (68), Expect = 3.3
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -2
Query: 304 LIDDGKSDKVLMSHDIHTKHRLTAFGGHGYAHIINTVLPKM 182
L+ G SD+ + +H+IHT + + GH +A + +L K+
Sbjct: 1169 LVFSGSSDQSVHAHNIHTGELVRIYKGHNHAVTVVNILGKV 1209
>AL832455-1|CAD89926.1| 1308|Homo sapiens hypothetical protein
protein.
Length = 1308
Score = 31.5 bits (68), Expect = 3.3
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -2
Query: 304 LIDDGKSDKVLMSHDIHTKHRLTAFGGHGYAHIINTVLPKM 182
L+ G SD+ + +H+IHT + + GH +A + +L K+
Sbjct: 1137 LVFSGSSDQSVHAHNIHTGELVRIYKGHNHAVTVVNILGKV 1177
>AL832367-1|CAD91157.1| 820|Homo sapiens hypothetical protein
protein.
Length = 820
Score = 31.5 bits (68), Expect = 3.3
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -2
Query: 304 LIDDGKSDKVLMSHDIHTKHRLTAFGGHGYAHIINTVLPKM 182
L+ G SD+ + +H+IHT + + GH +A + +L K+
Sbjct: 649 LVFSGSSDQSVHAHNIHTGELVRIYKGHNHAVTVVNILGKV 689
>AL832352-1|CAD91149.1| 1337|Homo sapiens hypothetical protein
protein.
Length = 1337
Score = 31.5 bits (68), Expect = 3.3
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -2
Query: 304 LIDDGKSDKVLMSHDIHTKHRLTAFGGHGYAHIINTVLPKM 182
L+ G SD+ + +H+IHT + + GH +A + +L K+
Sbjct: 1166 LVFSGSSDQSVHAHNIHTGELVRIYKGHNHAVTVVNILGKV 1206
>AL832014-1|CAD91147.1| 1264|Homo sapiens hypothetical protein
protein.
Length = 1264
Score = 31.5 bits (68), Expect = 3.3
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -2
Query: 304 LIDDGKSDKVLMSHDIHTKHRLTAFGGHGYAHIINTVLPKM 182
L+ G SD+ + +H+IHT + + GH +A + +L K+
Sbjct: 1093 LVFSGSSDQSVHAHNIHTGELVRIYKGHNHAVTVVNILGKV 1133
>AK024726-1|BAB14976.1| 178|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21073 fis, clone CAS02025. ).
Length = 178
Score = 31.5 bits (68), Expect = 3.3
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -2
Query: 304 LIDDGKSDKVLMSHDIHTKHRLTAFGGHGYAHIINTVLPKM 182
L+ G SD+ + +H+IHT + + GH +A + +L K+
Sbjct: 7 LVFSGSSDQSVHAHNIHTGELVRIYKGHNHAVTVVNILGKV 47
>AF209502-2|AAL40184.1| 1883|Homo sapiens ZFP106 protein.
Length = 1883
Score = 31.5 bits (68), Expect = 3.3
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -2
Query: 304 LIDDGKSDKVLMSHDIHTKHRLTAFGGHGYAHIINTVLPKM 182
L+ G SD+ + +H+IHT + + GH +A + +L K+
Sbjct: 1712 LVFSGSSDQSVHAHNIHTGELVRIYKGHNHAVTVVNILGKV 1752
>AF205632-1|AAG35666.1| 1883|Homo sapiens zinc finger protein 106
protein.
Length = 1883
Score = 31.5 bits (68), Expect = 3.3
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -2
Query: 304 LIDDGKSDKVLMSHDIHTKHRLTAFGGHGYAHIINTVLPKM 182
L+ G SD+ + +H+IHT + + GH +A + +L K+
Sbjct: 1712 LVFSGSSDQSVHAHNIHTGELVRIYKGHNHAVTVVNILGKV 1752
>X80818-1|CAA56784.1| 912|Homo sapiens metabotropic glutamate
receptor type 4 protein.
Length = 912
Score = 30.3 bits (65), Expect = 7.7
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +2
Query: 53 SICVKYCLKLFPNEKLLNVSGQPSCWIVYSNPVYGILRYSFERHFRQHCVYDV 211
SIC C P E+ V G P CW + P G +Y +R+ + C YD+
Sbjct: 518 SICSLPCQ---PGERKKTVKGMPCCW--HCEPCTG-YQYQVDRYTCKTCPYDM 564
>U92457-1|AAB51762.1| 912|Homo sapiens metabotropic glutamate
receptor 4 protein.
Length = 912
Score = 30.3 bits (65), Expect = 7.7
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +2
Query: 53 SICVKYCLKLFPNEKLLNVSGQPSCWIVYSNPVYGILRYSFERHFRQHCVYDV 211
SIC C P E+ V G P CW + P G +Y +R+ + C YD+
Sbjct: 518 SICSLPCQ---PGERKKTVKGMPCCW--HCEPCTG-YQYQVDRYTCKTCPYDM 564
>BC130528-1|AAI30529.1| 912|Homo sapiens glutamate receptor,
metabotropic 4 protein.
Length = 912
Score = 30.3 bits (65), Expect = 7.7
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +2
Query: 53 SICVKYCLKLFPNEKLLNVSGQPSCWIVYSNPVYGILRYSFERHFRQHCVYDV 211
SIC C P E+ V G P CW + P G +Y +R+ + C YD+
Sbjct: 518 SICSLPCQ---PGERKKTVKGMPCCW--HCEPCTG-YQYQVDRYTCKTCPYDM 564
>BC130526-1|AAI30527.1| 912|Homo sapiens glutamate receptor,
metabotropic 4 protein.
Length = 912
Score = 30.3 bits (65), Expect = 7.7
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +2
Query: 53 SICVKYCLKLFPNEKLLNVSGQPSCWIVYSNPVYGILRYSFERHFRQHCVYDV 211
SIC C P E+ V G P CW + P G +Y +R+ + C YD+
Sbjct: 518 SICSLPCQ---PGERKKTVKGMPCCW--HCEPCTG-YQYQVDRYTCKTCPYDM 564
>AL590403-1|CAI17348.1| 912|Homo sapiens glutamate receptor,
metabotropic 4 protein.
Length = 912
Score = 30.3 bits (65), Expect = 7.7
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +2
Query: 53 SICVKYCLKLFPNEKLLNVSGQPSCWIVYSNPVYGILRYSFERHFRQHCVYDV 211
SIC C P E+ V G P CW + P G +Y +R+ + C YD+
Sbjct: 518 SICSLPCQ---PGERKKTVKGMPCCW--HCEPCTG-YQYQVDRYTCKTCPYDM 564
>AK131536-1|BAD18673.1| 796|Homo sapiens protein ( Homo sapiens
cDNA FLJ16766 fis, clone BRAWH3013197, highly similar
to Metabotropic glutamate receptor 4 precursor. ).
Length = 796
Score = 30.3 bits (65), Expect = 7.7
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +2
Query: 53 SICVKYCLKLFPNEKLLNVSGQPSCWIVYSNPVYGILRYSFERHFRQHCVYDV 211
SIC C P E+ V G P CW + P G +Y +R+ + C YD+
Sbjct: 402 SICSLPCQ---PGERKKTVKGMPCCW--HCEPCTG-YQYQVDRYTCKTCPYDM 448
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,954,223
Number of Sequences: 237096
Number of extensions: 2447085
Number of successful extensions: 12428
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 12212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12428
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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