Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17p16
(774 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC003176-1|AAH03176.1| 475|Homo sapiens CNDP dipeptidase 2 (met... 108 3e-23
BC001375-1|AAH01375.1| 475|Homo sapiens CNDP dipeptidase 2 (met... 108 3e-23
AK001692-1|BAA91840.1| 475|Homo sapiens protein ( Homo sapiens ... 108 3e-23
AK001262-1|BAA91587.1| 311|Homo sapiens protein ( Homo sapiens ... 108 3e-23
AJ347717-1|CAC69883.1| 475|Homo sapiens glutamate carboxypeptid... 108 3e-23
AF258592-1|AAG23795.1| 391|Homo sapiens PP856 protein. 108 3e-23
AK001983-1|BAA92018.1| 170|Homo sapiens protein ( Homo sapiens ... 107 6e-23
BC117122-1|AAI17123.1| 508|Homo sapiens carnosine dipeptidase 1... 84 5e-16
BC113512-1|AAI13513.1| 507|Homo sapiens carnosine dipeptidase 1... 84 5e-16
BC110295-1|AAI10296.1| 508|Homo sapiens carnosine dipeptidase 1... 84 5e-16
AY358756-1|AAQ89116.1| 507|Homo sapiens DPKL1915 protein. 84 5e-16
AJ417564-1|CAD10388.1| 508|Homo sapiens glutamate carboxypeptid... 84 5e-16
AK131263-1|BAD18441.1| 171|Homo sapiens protein ( Homo sapiens ... 61 5e-09
>BC003176-1|AAH03176.1| 475|Homo sapiens CNDP dipeptidase 2
(metallopeptidase M20 family) protein.
Length = 475
Score = 108 bits (259), Expect = 3e-23
Identities = 47/72 (65%), Positives = 61/72 (84%)
Frame = -1
Query: 774 KLIYQTDPDMSREGGSIPVTITLQEASGKNVLLLPMGAGDDMAHSQNEKINVRNYIEGIK 595
K ++ +PD++REGGSIPVT+T QEA+GKNV+LLP+G+ DD AHSQNEK+N NYIEG K
Sbjct: 402 KTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRYNYIEGTK 461
Query: 594 LFAAYLFEVGKL 559
+ AAYL+EV +L
Sbjct: 462 MLAAYLYEVSQL 473
>BC001375-1|AAH01375.1| 475|Homo sapiens CNDP dipeptidase 2
(metallopeptidase M20 family) protein.
Length = 475
Score = 108 bits (259), Expect = 3e-23
Identities = 47/72 (65%), Positives = 61/72 (84%)
Frame = -1
Query: 774 KLIYQTDPDMSREGGSIPVTITLQEASGKNVLLLPMGAGDDMAHSQNEKINVRNYIEGIK 595
K ++ +PD++REGGSIPVT+T QEA+GKNV+LLP+G+ DD AHSQNEK+N NYIEG K
Sbjct: 402 KTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRYNYIEGTK 461
Query: 594 LFAAYLFEVGKL 559
+ AAYL+EV +L
Sbjct: 462 MLAAYLYEVSQL 473
>AK001692-1|BAA91840.1| 475|Homo sapiens protein ( Homo sapiens
cDNA FLJ10830 fis, clone NT2RP4001143, weakly similar to
SUCCINYL-DIAMINOPIMELATE DESUCCINYLASE (EC 3.5.1.18). ).
Length = 475
Score = 108 bits (259), Expect = 3e-23
Identities = 47/72 (65%), Positives = 61/72 (84%)
Frame = -1
Query: 774 KLIYQTDPDMSREGGSIPVTITLQEASGKNVLLLPMGAGDDMAHSQNEKINVRNYIEGIK 595
K ++ +PD++REGGSIPVT+T QEA+GKNV+LLP+G+ DD AHSQNEK+N NYIEG K
Sbjct: 402 KTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRYNYIEGTK 461
Query: 594 LFAAYLFEVGKL 559
+ AAYL+EV +L
Sbjct: 462 MLAAYLYEVSQL 473
>AK001262-1|BAA91587.1| 311|Homo sapiens protein ( Homo sapiens
cDNA FLJ10400 fis, clone NT2RM4000395. ).
Length = 311
Score = 108 bits (259), Expect = 3e-23
Identities = 47/72 (65%), Positives = 61/72 (84%)
Frame = -1
Query: 774 KLIYQTDPDMSREGGSIPVTITLQEASGKNVLLLPMGAGDDMAHSQNEKINVRNYIEGIK 595
K ++ +PD++REGGSIPVT+T QEA+GKNV+LLP+G+ DD AHSQNEK+N NYIEG K
Sbjct: 238 KTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRYNYIEGTK 297
Query: 594 LFAAYLFEVGKL 559
+ AAYL+EV +L
Sbjct: 298 MLAAYLYEVSQL 309
>AJ347717-1|CAC69883.1| 475|Homo sapiens glutamate carboxypeptidase
protein.
Length = 475
Score = 108 bits (259), Expect = 3e-23
Identities = 47/72 (65%), Positives = 61/72 (84%)
Frame = -1
Query: 774 KLIYQTDPDMSREGGSIPVTITLQEASGKNVLLLPMGAGDDMAHSQNEKINVRNYIEGIK 595
K ++ +PD++REGGSIPVT+T QEA+GKNV+LLP+G+ DD AHSQNEK+N NYIEG K
Sbjct: 402 KTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRYNYIEGTK 461
Query: 594 LFAAYLFEVGKL 559
+ AAYL+EV +L
Sbjct: 462 MLAAYLYEVSQL 473
>AF258592-1|AAG23795.1| 391|Homo sapiens PP856 protein.
Length = 391
Score = 108 bits (259), Expect = 3e-23
Identities = 47/72 (65%), Positives = 61/72 (84%)
Frame = -1
Query: 774 KLIYQTDPDMSREGGSIPVTITLQEASGKNVLLLPMGAGDDMAHSQNEKINVRNYIEGIK 595
K ++ +PD++REGGSIPVT+T QEA+GKNV+LLP+G+ DD AHSQNEK+N NYIEG K
Sbjct: 318 KTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRYNYIEGTK 377
Query: 594 LFAAYLFEVGKL 559
+ AAYL+EV +L
Sbjct: 378 MLAAYLYEVSQL 389
>AK001983-1|BAA92018.1| 170|Homo sapiens protein ( Homo sapiens
cDNA FLJ11121 fis, clone PLACE1006139. ).
Length = 170
Score = 107 bits (256), Expect = 6e-23
Identities = 46/72 (63%), Positives = 61/72 (84%)
Frame = -1
Query: 774 KLIYQTDPDMSREGGSIPVTITLQEASGKNVLLLPMGAGDDMAHSQNEKINVRNYIEGIK 595
+ ++ +PD++REGGSIPVT+T QEA+GKNV+LLP+G+ DD AHSQNEK+N NYIEG K
Sbjct: 97 RTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRYNYIEGTK 156
Query: 594 LFAAYLFEVGKL 559
+ AAYL+EV +L
Sbjct: 157 MLAAYLYEVSQL 168
>BC117122-1|AAI17123.1| 508|Homo sapiens carnosine dipeptidase 1
(metallopeptidase M20 family) protein.
Length = 508
Score = 84.2 bits (199), Expect = 5e-16
Identities = 38/72 (52%), Positives = 52/72 (72%)
Frame = -1
Query: 774 KLIYQTDPDMSREGGSIPVTITLQEASGKNVLLLPMGAGDDMAHSQNEKINVRNYIEGIK 595
+ ++ T+PDM R+G +IP+ QE K+V+L+P+GA DD HSQNEKIN NYIEG K
Sbjct: 436 RTVFGTEPDMIRDGSTIPIAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWNYIEGTK 495
Query: 594 LFAAYLFEVGKL 559
LFAA+ E+ +L
Sbjct: 496 LFAAFFLEMAQL 507
>BC113512-1|AAI13513.1| 507|Homo sapiens carnosine dipeptidase 1
(metallopeptidase M20 family) protein.
Length = 507
Score = 84.2 bits (199), Expect = 5e-16
Identities = 38/72 (52%), Positives = 52/72 (72%)
Frame = -1
Query: 774 KLIYQTDPDMSREGGSIPVTITLQEASGKNVLLLPMGAGDDMAHSQNEKINVRNYIEGIK 595
+ ++ T+PDM R+G +IP+ QE K+V+L+P+GA DD HSQNEKIN NYIEG K
Sbjct: 435 RTVFGTEPDMIRDGSTIPIAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWNYIEGTK 494
Query: 594 LFAAYLFEVGKL 559
LFAA+ E+ +L
Sbjct: 495 LFAAFFLEMAQL 506
>BC110295-1|AAI10296.1| 508|Homo sapiens carnosine dipeptidase 1
(metallopeptidase M20 family) protein.
Length = 508
Score = 84.2 bits (199), Expect = 5e-16
Identities = 38/72 (52%), Positives = 52/72 (72%)
Frame = -1
Query: 774 KLIYQTDPDMSREGGSIPVTITLQEASGKNVLLLPMGAGDDMAHSQNEKINVRNYIEGIK 595
+ ++ T+PDM R+G +IP+ QE K+V+L+P+GA DD HSQNEKIN NYIEG K
Sbjct: 436 RTVFGTEPDMIRDGSTIPIAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWNYIEGTK 495
Query: 594 LFAAYLFEVGKL 559
LFAA+ E+ +L
Sbjct: 496 LFAAFFLEMAQL 507
>AY358756-1|AAQ89116.1| 507|Homo sapiens DPKL1915 protein.
Length = 507
Score = 84.2 bits (199), Expect = 5e-16
Identities = 38/72 (52%), Positives = 52/72 (72%)
Frame = -1
Query: 774 KLIYQTDPDMSREGGSIPVTITLQEASGKNVLLLPMGAGDDMAHSQNEKINVRNYIEGIK 595
+ ++ T+PDM R+G +IP+ QE K+V+L+P+GA DD HSQNEKIN NYIEG K
Sbjct: 435 RTVFGTEPDMIRDGSTIPIAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWNYIEGTK 494
Query: 594 LFAAYLFEVGKL 559
LFAA+ E+ +L
Sbjct: 495 LFAAFFLEMAQL 506
>AJ417564-1|CAD10388.1| 508|Homo sapiens glutamate
carboxypeptidase-like protein 2 protein.
Length = 508
Score = 84.2 bits (199), Expect = 5e-16
Identities = 38/72 (52%), Positives = 52/72 (72%)
Frame = -1
Query: 774 KLIYQTDPDMSREGGSIPVTITLQEASGKNVLLLPMGAGDDMAHSQNEKINVRNYIEGIK 595
+ ++ T+PDM R+G +IP+ QE K+V+L+P+GA DD HSQNEKIN NYIEG K
Sbjct: 436 RTVFGTEPDMIRDGSTIPIAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWNYIEGTK 495
Query: 594 LFAAYLFEVGKL 559
LFAA+ E+ +L
Sbjct: 496 LFAAFFLEMAQL 507
>AK131263-1|BAD18441.1| 171|Homo sapiens protein ( Homo sapiens
cDNA FLJ16195 fis, clone BRTHA3000296. ).
Length = 171
Score = 60.9 bits (141), Expect = 5e-09
Identities = 26/51 (50%), Positives = 37/51 (72%)
Frame = -1
Query: 774 KLIYQTDPDMSREGGSIPVTITLQEASGKNVLLLPMGAGDDMAHSQNEKIN 622
+ ++ T+PDM R+G +IP+ QE K+V+L+P+GA DD HSQNEKIN
Sbjct: 97 RTVFGTEPDMIRDGSTIPIAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKIN 147
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,106,336
Number of Sequences: 237096
Number of extensions: 1864746
Number of successful extensions: 2792
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2792
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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