Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17p14
(840 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esteras... 23 4.0
AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esteras... 23 4.0
AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esteras... 23 4.0
AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esteras... 23 4.0
AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esteras... 23 4.0
AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory recept... 22 5.3
AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory recept... 22 5.3
AF225975-1|AAF74117.1| 256|Tribolium castaneum unknown protein. 22 7.0
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 21 9.2
AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 21 9.2
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 21 9.2
>AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 22.6 bits (46), Expect = 4.0
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 216 ERKPPGTSLGSSGFLCLNSGSYSLTSIDIGSETQ 317
E+KP G L L SG Y+ I IG T+
Sbjct: 285 EKKPEGAFLCEDPVDLLESGRYNHVPIMIGYTTR 318
>AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 22.6 bits (46), Expect = 4.0
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 216 ERKPPGTSLGSSGFLCLNSGSYSLTSIDIGSETQ 317
E+KP G L L SG Y+ I IG T+
Sbjct: 285 EKKPEGAFLCEDPVDLLESGRYNHVPIMIGYTTR 318
>AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 22.6 bits (46), Expect = 4.0
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 216 ERKPPGTSLGSSGFLCLNSGSYSLTSIDIGSETQ 317
E+KP G L L SG Y+ I IG T+
Sbjct: 285 EKKPEGAFLCEDPVDLLESGRYNHVPIMIGYTTR 318
>AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esterase
protein.
Length = 510
Score = 22.6 bits (46), Expect = 4.0
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 216 ERKPPGTSLGSSGFLCLNSGSYSLTSIDIGSETQ 317
E+KP G L L SG Y+ I IG T+
Sbjct: 285 EKKPEGAFLCEDPVDLLESGRYNHVPIMIGYTTR 318
>AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esterase
protein.
Length = 509
Score = 22.6 bits (46), Expect = 4.0
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 216 ERKPPGTSLGSSGFLCLNSGSYSLTSIDIGSETQ 317
E+KP G L L SG Y+ I IG T+
Sbjct: 284 EKKPEGAFLCEDPVDLLESGRYNHVPIMIGYTTR 317
>AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory receptor
candidate 18 protein.
Length = 387
Score = 22.2 bits (45), Expect = 5.3
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +1
Query: 553 FLVHWENRVLVS 588
FL+HW R+L+S
Sbjct: 163 FLIHWYPRMLIS 174
>AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory receptor
candidate 17 protein.
Length = 372
Score = 22.2 bits (45), Expect = 5.3
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +1
Query: 553 FLVHWENRVLVS 588
FL+HW R+L+S
Sbjct: 163 FLIHWYPRMLIS 174
>AF225975-1|AAF74117.1| 256|Tribolium castaneum unknown protein.
Length = 256
Score = 21.8 bits (44), Expect = 7.0
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = -3
Query: 283 LYEPLFKHKNPEDPN 239
+++ + H NP DPN
Sbjct: 46 IHQTVIYHNNPRDPN 60
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 21.4 bits (43), Expect = 9.2
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = -3
Query: 370 ECTAESTDSSEKPKAFIHWVSEPISIEVRLYEPLFKHKNPE 248
E TA + KAF+ P SI R Y P F + +
Sbjct: 188 EVTALKIKYNPFAKAFLDAKERPDSIYQREYSPTFTQQQTQ 228
>AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless
protein.
Length = 302
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 228 PGTSLGSSGFLCLN 269
PG +L +GFLC N
Sbjct: 160 PGPALPPAGFLCNN 173
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 228 PGTSLGSSGFLCLN 269
PG +L +GFLC N
Sbjct: 160 PGPALPPTGFLCNN 173
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,430
Number of Sequences: 336
Number of extensions: 3797
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23140487
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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