Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17o08
(793 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.4
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 23 4.3
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 22 5.7
S78458-1|AAB34402.1| 46|Apis mellifera apamin protein. 22 5.7
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 7.5
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 7.5
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 7.5
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 7.5
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 7.5
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 7.5
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 7.5
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 22 7.5
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 7.5
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 9.9
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 21 9.9
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.4
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -1
Query: 460 VYTCNKRYNCVLKLIIKMLR 401
+Y CNKR NC + I ++++
Sbjct: 471 IYECNKRCNCDIDCINRVVQ 490
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 22.6 bits (46), Expect = 4.3
Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -3
Query: 245 LYVDSYV-YFFPFSSRSLSVIHRQQF 171
+Y+D +FFPFS L+V++ F
Sbjct: 357 IYIDKVSRFFFPFSFLILNVVYWSTF 382
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 22.2 bits (45), Expect = 5.7
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 598 KNVFYKINVSHKFKYTLY 651
KN+ +NV HK+KY Y
Sbjct: 30 KNLTNTLNVIHKWKYLDY 47
>S78458-1|AAB34402.1| 46|Apis mellifera apamin protein.
Length = 46
Score = 22.2 bits (45), Expect = 5.7
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = -1
Query: 418 IIKMLRCLYVFV 383
+I MLRC+Y+F+
Sbjct: 1 MISMLRCIYLFL 12
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.5
Identities = 10/44 (22%), Positives = 20/44 (45%)
Frame = +2
Query: 104 SNEYRSRNYV*DKIYRQLXXXXXXXXXXXQIGTERKTEKNIHKN 235
+ EYR +N +K++ + + R+ E+N +KN
Sbjct: 9 NREYREKNRRYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKN 52
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.5
Identities = 10/44 (22%), Positives = 20/44 (45%)
Frame = +2
Query: 104 SNEYRSRNYV*DKIYRQLXXXXXXXXXXXQIGTERKTEKNIHKN 235
+ EYR +N +K++ + + R+ E+N +KN
Sbjct: 9 NREYREKNRRYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKN 52
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.5
Identities = 10/44 (22%), Positives = 20/44 (45%)
Frame = +2
Query: 104 SNEYRSRNYV*DKIYRQLXXXXXXXXXXXQIGTERKTEKNIHKN 235
+ EYR +N +K++ + + R+ E+N +KN
Sbjct: 9 NREYREKNRRYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKN 52
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.5
Identities = 10/44 (22%), Positives = 20/44 (45%)
Frame = +2
Query: 104 SNEYRSRNYV*DKIYRQLXXXXXXXXXXXQIGTERKTEKNIHKN 235
+ EYR +N +K++ + + R+ E+N +KN
Sbjct: 9 NREYREKNRRYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKN 52
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.5
Identities = 10/44 (22%), Positives = 20/44 (45%)
Frame = +2
Query: 104 SNEYRSRNYV*DKIYRQLXXXXXXXXXXXQIGTERKTEKNIHKN 235
+ EYR +N +K++ + + R+ E+N +KN
Sbjct: 9 NREYREKNRRYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKN 52
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.5
Identities = 10/44 (22%), Positives = 20/44 (45%)
Frame = +2
Query: 104 SNEYRSRNYV*DKIYRQLXXXXXXXXXXXQIGTERKTEKNIHKN 235
+ EYR +N +K++ + + R+ E+N +KN
Sbjct: 9 NREYREKNRRYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKN 52
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.5
Identities = 10/44 (22%), Positives = 20/44 (45%)
Frame = +2
Query: 104 SNEYRSRNYV*DKIYRQLXXXXXXXXXXXQIGTERKTEKNIHKN 235
+ EYR +N +K++ + + R+ E+N +KN
Sbjct: 9 NREYREKNRRYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKN 52
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.8 bits (44), Expect = 7.5
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +1
Query: 598 KNVFYKINVSHKFKYTLY 651
KN+ + +NV H++KY Y
Sbjct: 29 KNLEHSMNVIHEWKYIDY 46
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 7.5
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 623 YHINLNIHCT 652
YH N+N HCT
Sbjct: 1679 YHHNVNKHCT 1688
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.4 bits (43), Expect = 9.9
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 520 RVTYCCSPKLNQKWYKN 470
R Y CS + QK YKN
Sbjct: 269 RKRYSCSREREQKSYKN 285
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.4 bits (43), Expect = 9.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 66 SMIQNKHLNSALARTNTDH 122
S I HLNS + TN+ H
Sbjct: 338 STIVRNHLNSTCSVTNSPH 356
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,245
Number of Sequences: 438
Number of extensions: 4479
Number of successful extensions: 23
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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