Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17n06
(839 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 27 0.22
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 27 0.22
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 27 0.22
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 27 0.22
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 27 0.28
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 27 0.28
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 25 0.66
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 25 0.66
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 25 0.66
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 25 0.66
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 25 0.66
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 25 0.66
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 25 0.66
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 25 0.66
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 25 0.66
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 25 0.66
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 25 0.66
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 25 0.87
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 24 1.5
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 24 2.0
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 24 2.0
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 3.5
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 3.5
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 22 8.1
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 8.1
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 27.1 bits (57), Expect = 0.22
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +1
Query: 355 QTSDTKAIPSKLVAFATTSNDEKKNYNYNSTTLKYNKKVNHTI 483
+T ++ K+++ + + NY YN YNKK+ + I
Sbjct: 70 RTERERSREPKIISSLSNNTIHNNNYKYNYNNNNYNKKLYYNI 112
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 27.1 bits (57), Expect = 0.22
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +1
Query: 355 QTSDTKAIPSKLVAFATTSNDEKKNYNYNSTTLKYNKKVNHTI 483
+T ++ K+++ + + NY YN YNKK+ + I
Sbjct: 70 RTERERSREPKIISSLSNNTIHNNNYKYNYNNNNYNKKLYYNI 112
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 27.1 bits (57), Expect = 0.22
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +1
Query: 355 QTSDTKAIPSKLVAFATTSNDEKKNYNYNSTTLKYNKKVNHTI 483
+T ++ K+++ + + NY YN YNKK+ + I
Sbjct: 70 RTERERSREPKIISSLSNNTIHNNNYKYNYNNNNYNKKLYYNI 112
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 27.1 bits (57), Expect = 0.22
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +1
Query: 355 QTSDTKAIPSKLVAFATTSNDEKKNYNYNSTTLKYNKKVNHTI 483
+T ++ K+++ + + NY YN YNKK+ + I
Sbjct: 70 RTERERSREPKIISSLSNNTIHNNNYKYNYNNNNYNKKLYYNI 112
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 26.6 bits (56), Expect = 0.28
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 367 TKAIPSKLVAFATTSNDEKKNYNYNSTTLKYNKKVNHTIQNNY 495
T+ SK ++ ++ K NYN+ YN N+ NNY
Sbjct: 71 TERETSKEPKIISSLSNNYKYSNYNNYNNNYNNNYNNNYNNNY 113
Score = 24.2 bits (50), Expect = 1.5
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 427 NYNYNSTTLKYNKKVNHTIQNNYG*LIHKLLRTMI 531
NY Y++ YN N+ NNY KL + I
Sbjct: 88 NYKYSNYN-NYNNNYNNNYNNNYNNNYKKLYKNYI 121
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 26.6 bits (56), Expect = 0.28
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 367 TKAIPSKLVAFATTSNDEKKNYNYNSTTLKYNKKVNHTIQNNY 495
T+ SK ++ ++ K NYN+ YN N+ NNY
Sbjct: 71 TERETSKEPKIISSLSNNYKYSNYNNYNNNYNNNYNNNYNNNY 113
Score = 24.2 bits (50), Expect = 1.5
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 427 NYNYNSTTLKYNKKVNHTIQNNYG*LIHKLLRTMI 531
NY Y++ YN N+ NNY KL + I
Sbjct: 88 NYKYSNYN-NYNNNYNNNYNNNYNNNYKKLYKNYI 121
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.4 bits (53), Expect = 0.66
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +1
Query: 382 SKLVAFATTSNDEKKNYNYNSTTLKYNKKVN 474
SK + +N NYNYN+ YN N
Sbjct: 76 SKEPKIISNNNSLSNNYNYNNNYNNYNNNYN 106
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.66
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 382 SKLVAFATTSNDEKKNYNYNSTTLKYNK 465
SK + +N NYNYN+ YNK
Sbjct: 76 SKEPKIISNNNSLSNNYNYNNNYNNYNK 103
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.66
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 382 SKLVAFATTSNDEKKNYNYNSTTLKYNK 465
SK + +N NYNYN+ YNK
Sbjct: 76 SKEPKIISNNNSLSNNYNYNNNYNNYNK 103
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.66
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 382 SKLVAFATTSNDEKKNYNYNSTTLKYNK 465
SK + +N NYNYN+ YNK
Sbjct: 76 SKEPKIISNNNSLSNNYNYNNNYNNYNK 103
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.66
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 382 SKLVAFATTSNDEKKNYNYNSTTLKYNK 465
SK + +N NYNYN+ YNK
Sbjct: 76 SKEPKIISNNNSLSNNYNYNNNYNNYNK 103
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.66
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 382 SKLVAFATTSNDEKKNYNYNSTTLKYNK 465
SK + +N NYNYN+ YNK
Sbjct: 76 SKEPKIISNNNSLSNNYNYNNNYNNYNK 103
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.66
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 382 SKLVAFATTSNDEKKNYNYNSTTLKYNK 465
SK + +N NYNYN+ YNK
Sbjct: 76 SKEPKIISNNNSLSNNYNYNNNYNNYNK 103
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.66
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 382 SKLVAFATTSNDEKKNYNYNSTTLKYNK 465
SK + +N NYNYN+ YNK
Sbjct: 76 SKEPKIISNNNSLSNNYNYNNNYNNYNK 103
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.66
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 382 SKLVAFATTSNDEKKNYNYNSTTLKYNK 465
SK + +N NYNYN+ YNK
Sbjct: 76 SKEPKIISNNNSLSNNYNYNNNYNNYNK 103
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 25.4 bits (53), Expect = 0.66
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 382 SKLVAFATTSNDEKKNYNYNSTTLKYNK 465
SK + +N NYNYN+ YNK
Sbjct: 309 SKEPKIISNNNSLSNNYNYNNNYNNYNK 336
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 25.4 bits (53), Expect = 0.66
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 382 SKLVAFATTSNDEKKNYNYNSTTLKYNK 465
SK + +N NYNYN+ YNK
Sbjct: 309 SKEPKIISNNNSLSNNYNYNNNYNNYNK 336
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.0 bits (52), Expect = 0.87
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 382 SKLVAFATTSNDEKKNYNYNSTTLKYNK 465
SK + +N NYNYN+ YNK
Sbjct: 76 SKEPKIISNNNPLSNNYNYNNNYNNYNK 103
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 24.2 bits (50), Expect = 1.5
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1
Query: 427 NYNYNSTTLKYN 462
NYNYN+ KYN
Sbjct: 321 NYNYNNNNYKYN 332
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.8 bits (49), Expect = 2.0
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +1
Query: 355 QTSDTKAIPSKLVAFATTSNDEKKNYN-YNSTTLKYNKKVNHTI 483
+T ++ K+++ + ++N NYN YN+ YNKK+ + I
Sbjct: 70 RTERERSREPKIIS-SLSNNYNYSNYNNYNNNYNNYNKKLYYNI 112
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 23.8 bits (49), Expect = 2.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1
Query: 409 SNDEKKNYNYNSTTLKYNKKVNHTI 483
+N+ NYNYN+ KK+ + I
Sbjct: 97 NNNNYNNYNYNNNNYNNYKKLYYNI 121
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.0 bits (47), Expect = 3.5
Identities = 12/47 (25%), Positives = 21/47 (44%)
Frame = +1
Query: 379 PSKLVAFATTSNDEKKNYNYNSTTLKYNKKVNHTIQNNYG*LIHKLL 519
P + + + + NYN N+ YN N+ NNY L + ++
Sbjct: 312 PKIISSLSNKTIHNNNNYNNNNYNNNYN-NYNNNNYNNYKKLYYNII 357
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.0 bits (47), Expect = 3.5
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = +1
Query: 403 TTSNDEKKNYNYNSTTLKYNKKVNHTIQNNYG*LIHKLL 519
T N+ YNYN+ N N+ NN L + ++
Sbjct: 322 TIHNNNNYKYNYNNNNYN-NNNYNNNYNNNCKKLYYNII 359
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 8.1
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = +1
Query: 403 TTSNDEKKNYNYNSTTLKYNKKVNHTIQ 486
T N+ YNYN+ K +N+ Q
Sbjct: 89 TIHNNNNYKYNYNNNCKKLYYNINYIEQ 116
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.8 bits (44), Expect = 8.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +3
Query: 123 YKTNPNNVCQCVAQN 167
Y +N +C+C AQN
Sbjct: 663 YSSNNKTLCKCDAQN 677
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,926
Number of Sequences: 438
Number of extensions: 4263
Number of successful extensions: 32
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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