Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17k13
(789 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC003176-1|AAH03176.1| 475|Homo sapiens CNDP dipeptidase 2 (met... 112 1e-24
BC001375-1|AAH01375.1| 475|Homo sapiens CNDP dipeptidase 2 (met... 112 1e-24
AK001692-1|BAA91840.1| 475|Homo sapiens protein ( Homo sapiens ... 112 1e-24
AK001262-1|BAA91587.1| 311|Homo sapiens protein ( Homo sapiens ... 112 1e-24
AJ347717-1|CAC69883.1| 475|Homo sapiens glutamate carboxypeptid... 112 1e-24
AF258592-1|AAG23795.1| 391|Homo sapiens PP856 protein. 112 1e-24
AK001983-1|BAA92018.1| 170|Homo sapiens protein ( Homo sapiens ... 111 3e-24
BC117122-1|AAI17123.1| 508|Homo sapiens carnosine dipeptidase 1... 90 7e-18
BC113512-1|AAI13513.1| 507|Homo sapiens carnosine dipeptidase 1... 90 7e-18
BC110295-1|AAI10296.1| 508|Homo sapiens carnosine dipeptidase 1... 90 7e-18
AY358756-1|AAQ89116.1| 507|Homo sapiens DPKL1915 protein. 90 7e-18
AJ417564-1|CAD10388.1| 508|Homo sapiens glutamate carboxypeptid... 90 7e-18
AK131263-1|BAD18441.1| 171|Homo sapiens protein ( Homo sapiens ... 67 8e-11
>BC003176-1|AAH03176.1| 475|Homo sapiens CNDP dipeptidase 2
(metallopeptidase M20 family) protein.
Length = 475
Score = 112 bits (270), Expect = 1e-24
Identities = 50/78 (64%), Positives = 64/78 (82%)
Frame = -2
Query: 782 AAARATKLIYQTDPDMSREGGSIPVTITLQEASGKNVLLLPMGAGDDMAHSQNEKINVRN 603
A RA K ++ +PD++REGGSIPVT+T QEA+GKNV+LLP+G+ DD AHSQNEK+N N
Sbjct: 396 AGRRAMKTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRYN 455
Query: 602 YIEGIKLFAAYLFEVGKL 549
YIEG K+ AAYL+EV +L
Sbjct: 456 YIEGTKMLAAYLYEVSQL 473
>BC001375-1|AAH01375.1| 475|Homo sapiens CNDP dipeptidase 2
(metallopeptidase M20 family) protein.
Length = 475
Score = 112 bits (270), Expect = 1e-24
Identities = 50/78 (64%), Positives = 64/78 (82%)
Frame = -2
Query: 782 AAARATKLIYQTDPDMSREGGSIPVTITLQEASGKNVLLLPMGAGDDMAHSQNEKINVRN 603
A RA K ++ +PD++REGGSIPVT+T QEA+GKNV+LLP+G+ DD AHSQNEK+N N
Sbjct: 396 AGRRAMKTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRYN 455
Query: 602 YIEGIKLFAAYLFEVGKL 549
YIEG K+ AAYL+EV +L
Sbjct: 456 YIEGTKMLAAYLYEVSQL 473
>AK001692-1|BAA91840.1| 475|Homo sapiens protein ( Homo sapiens
cDNA FLJ10830 fis, clone NT2RP4001143, weakly similar to
SUCCINYL-DIAMINOPIMELATE DESUCCINYLASE (EC 3.5.1.18). ).
Length = 475
Score = 112 bits (270), Expect = 1e-24
Identities = 50/78 (64%), Positives = 64/78 (82%)
Frame = -2
Query: 782 AAARATKLIYQTDPDMSREGGSIPVTITLQEASGKNVLLLPMGAGDDMAHSQNEKINVRN 603
A RA K ++ +PD++REGGSIPVT+T QEA+GKNV+LLP+G+ DD AHSQNEK+N N
Sbjct: 396 AGRRAMKTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRYN 455
Query: 602 YIEGIKLFAAYLFEVGKL 549
YIEG K+ AAYL+EV +L
Sbjct: 456 YIEGTKMLAAYLYEVSQL 473
>AK001262-1|BAA91587.1| 311|Homo sapiens protein ( Homo sapiens
cDNA FLJ10400 fis, clone NT2RM4000395. ).
Length = 311
Score = 112 bits (270), Expect = 1e-24
Identities = 50/78 (64%), Positives = 64/78 (82%)
Frame = -2
Query: 782 AAARATKLIYQTDPDMSREGGSIPVTITLQEASGKNVLLLPMGAGDDMAHSQNEKINVRN 603
A RA K ++ +PD++REGGSIPVT+T QEA+GKNV+LLP+G+ DD AHSQNEK+N N
Sbjct: 232 AGRRAMKTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRYN 291
Query: 602 YIEGIKLFAAYLFEVGKL 549
YIEG K+ AAYL+EV +L
Sbjct: 292 YIEGTKMLAAYLYEVSQL 309
>AJ347717-1|CAC69883.1| 475|Homo sapiens glutamate carboxypeptidase
protein.
Length = 475
Score = 112 bits (270), Expect = 1e-24
Identities = 50/78 (64%), Positives = 64/78 (82%)
Frame = -2
Query: 782 AAARATKLIYQTDPDMSREGGSIPVTITLQEASGKNVLLLPMGAGDDMAHSQNEKINVRN 603
A RA K ++ +PD++REGGSIPVT+T QEA+GKNV+LLP+G+ DD AHSQNEK+N N
Sbjct: 396 AGRRAMKTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRYN 455
Query: 602 YIEGIKLFAAYLFEVGKL 549
YIEG K+ AAYL+EV +L
Sbjct: 456 YIEGTKMLAAYLYEVSQL 473
>AF258592-1|AAG23795.1| 391|Homo sapiens PP856 protein.
Length = 391
Score = 112 bits (270), Expect = 1e-24
Identities = 50/78 (64%), Positives = 64/78 (82%)
Frame = -2
Query: 782 AAARATKLIYQTDPDMSREGGSIPVTITLQEASGKNVLLLPMGAGDDMAHSQNEKINVRN 603
A RA K ++ +PD++REGGSIPVT+T QEA+GKNV+LLP+G+ DD AHSQNEK+N N
Sbjct: 312 AGRRAMKTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRYN 371
Query: 602 YIEGIKLFAAYLFEVGKL 549
YIEG K+ AAYL+EV +L
Sbjct: 372 YIEGTKMLAAYLYEVSQL 389
>AK001983-1|BAA92018.1| 170|Homo sapiens protein ( Homo sapiens
cDNA FLJ11121 fis, clone PLACE1006139. ).
Length = 170
Score = 111 bits (267), Expect = 3e-24
Identities = 49/78 (62%), Positives = 64/78 (82%)
Frame = -2
Query: 782 AAARATKLIYQTDPDMSREGGSIPVTITLQEASGKNVLLLPMGAGDDMAHSQNEKINVRN 603
A RA + ++ +PD++REGGSIPVT+T QEA+GKNV+LLP+G+ DD AHSQNEK+N N
Sbjct: 91 AGRRAMRTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRYN 150
Query: 602 YIEGIKLFAAYLFEVGKL 549
YIEG K+ AAYL+EV +L
Sbjct: 151 YIEGTKMLAAYLYEVSQL 168
>BC117122-1|AAI17123.1| 508|Homo sapiens carnosine dipeptidase 1
(metallopeptidase M20 family) protein.
Length = 508
Score = 90.2 bits (214), Expect = 7e-18
Identities = 42/78 (53%), Positives = 56/78 (71%)
Frame = -2
Query: 782 AAARATKLIYQTDPDMSREGGSIPVTITLQEASGKNVLLLPMGAGDDMAHSQNEKINVRN 603
AA RA + ++ T+PDM R+G +IP+ QE K+V+L+P+GA DD HSQNEKIN N
Sbjct: 430 AAKRAIRTVFGTEPDMIRDGSTIPIAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWN 489
Query: 602 YIEGIKLFAAYLFEVGKL 549
YIEG KLFAA+ E+ +L
Sbjct: 490 YIEGTKLFAAFFLEMAQL 507
>BC113512-1|AAI13513.1| 507|Homo sapiens carnosine dipeptidase 1
(metallopeptidase M20 family) protein.
Length = 507
Score = 90.2 bits (214), Expect = 7e-18
Identities = 42/78 (53%), Positives = 56/78 (71%)
Frame = -2
Query: 782 AAARATKLIYQTDPDMSREGGSIPVTITLQEASGKNVLLLPMGAGDDMAHSQNEKINVRN 603
AA RA + ++ T+PDM R+G +IP+ QE K+V+L+P+GA DD HSQNEKIN N
Sbjct: 429 AAKRAIRTVFGTEPDMIRDGSTIPIAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWN 488
Query: 602 YIEGIKLFAAYLFEVGKL 549
YIEG KLFAA+ E+ +L
Sbjct: 489 YIEGTKLFAAFFLEMAQL 506
>BC110295-1|AAI10296.1| 508|Homo sapiens carnosine dipeptidase 1
(metallopeptidase M20 family) protein.
Length = 508
Score = 90.2 bits (214), Expect = 7e-18
Identities = 42/78 (53%), Positives = 56/78 (71%)
Frame = -2
Query: 782 AAARATKLIYQTDPDMSREGGSIPVTITLQEASGKNVLLLPMGAGDDMAHSQNEKINVRN 603
AA RA + ++ T+PDM R+G +IP+ QE K+V+L+P+GA DD HSQNEKIN N
Sbjct: 430 AAKRAIRTVFGTEPDMIRDGSTIPIAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWN 489
Query: 602 YIEGIKLFAAYLFEVGKL 549
YIEG KLFAA+ E+ +L
Sbjct: 490 YIEGTKLFAAFFLEMAQL 507
>AY358756-1|AAQ89116.1| 507|Homo sapiens DPKL1915 protein.
Length = 507
Score = 90.2 bits (214), Expect = 7e-18
Identities = 42/78 (53%), Positives = 56/78 (71%)
Frame = -2
Query: 782 AAARATKLIYQTDPDMSREGGSIPVTITLQEASGKNVLLLPMGAGDDMAHSQNEKINVRN 603
AA RA + ++ T+PDM R+G +IP+ QE K+V+L+P+GA DD HSQNEKIN N
Sbjct: 429 AAKRAIRTVFGTEPDMIRDGSTIPIAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWN 488
Query: 602 YIEGIKLFAAYLFEVGKL 549
YIEG KLFAA+ E+ +L
Sbjct: 489 YIEGTKLFAAFFLEMAQL 506
>AJ417564-1|CAD10388.1| 508|Homo sapiens glutamate
carboxypeptidase-like protein 2 protein.
Length = 508
Score = 90.2 bits (214), Expect = 7e-18
Identities = 42/78 (53%), Positives = 56/78 (71%)
Frame = -2
Query: 782 AAARATKLIYQTDPDMSREGGSIPVTITLQEASGKNVLLLPMGAGDDMAHSQNEKINVRN 603
AA RA + ++ T+PDM R+G +IP+ QE K+V+L+P+GA DD HSQNEKIN N
Sbjct: 430 AAKRAIRTVFGTEPDMIRDGSTIPIAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWN 489
Query: 602 YIEGIKLFAAYLFEVGKL 549
YIEG KLFAA+ E+ +L
Sbjct: 490 YIEGTKLFAAFFLEMAQL 507
>AK131263-1|BAD18441.1| 171|Homo sapiens protein ( Homo sapiens
cDNA FLJ16195 fis, clone BRTHA3000296. ).
Length = 171
Score = 66.9 bits (156), Expect = 8e-11
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = -2
Query: 782 AAARATKLIYQTDPDMSREGGSIPVTITLQEASGKNVLLLPMGAGDDMAHSQNEKIN 612
AA RA + ++ T+PDM R+G +IP+ QE K+V+L+P+GA DD HSQNEKIN
Sbjct: 91 AAKRAIRTVFGTEPDMIRDGSTIPIAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKIN 147
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,351,419
Number of Sequences: 237096
Number of extensions: 1944858
Number of successful extensions: 2879
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2879
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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