Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17k02
(807 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003174-1|AAO24929.1| 384|Drosophila melanogaster SD02002p pro... 171 7e-43
AY051605-1|AAK93029.1| 600|Drosophila melanogaster GH24627p pro... 171 7e-43
AE014296-1251|AAF50568.1| 384|Drosophila melanogaster CG32380-P... 171 7e-43
AE014296-1250|AAF50567.2| 600|Drosophila melanogaster CG32380-P... 171 7e-43
BT022964-1|AAY55380.1| 197|Drosophila melanogaster IP04228p pro... 31 2.5
BT022933-1|AAY55349.1| 194|Drosophila melanogaster IP04328p pro... 31 2.5
BT004506-1|AAO42670.1| 1545|Drosophila melanogaster AT10293p pro... 30 3.2
AF495912-1|AAN60444.1| 2576|Drosophila melanogaster nesprin prot... 30 3.2
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P... 30 3.2
AF069781-1|AAC26858.1| 338|Drosophila melanogaster Bem46-like p... 29 7.5
AE014296-3448|AAF51661.2| 1058|Drosophila melanogaster CG10588-P... 29 7.5
AE014134-529|AAF51169.1| 338|Drosophila melanogaster CG18642-PA... 29 7.5
U23545-1|AAC46631.1| 546|Drosophila melanogaster Hk protein pro... 29 9.9
BT023168-1|AAY55584.1| 351|Drosophila melanogaster IP03352p pro... 29 9.9
BT023157-1|AAY55573.1| 351|Drosophila melanogaster IP03452p pro... 29 9.9
AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro... 29 9.9
AE014298-1426|AAF46567.3| 547|Drosophila melanogaster CG32688-P... 29 9.9
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC... 29 9.9
>BT003174-1|AAO24929.1| 384|Drosophila melanogaster SD02002p
protein.
Length = 384
Score = 171 bits (417), Expect = 7e-43
Identities = 73/90 (81%), Positives = 84/90 (93%)
Frame = -1
Query: 807 EYTSRSLYLLHILTWVMNMFGIFFILAAHEHYSIDVFIAFYITSRLFLYYHTLSNNQALM 628
EYT R+LY LH LTW++NMFGIFFILAAHEHYSIDVF+AFYITSRLFLYYHTL+NN+ALM
Sbjct: 155 EYTPRNLYFLHTLTWLLNMFGIFFILAAHEHYSIDVFVAFYITSRLFLYYHTLANNRALM 214
Query: 627 QSDSSRTRIWFPLLSFFESEVDGIVPNEYE 538
QSDS RTR+WFP+ S+FES VDG+VPNEY+
Sbjct: 215 QSDSKRTRVWFPMFSYFESSVDGMVPNEYD 244
>AY051605-1|AAK93029.1| 600|Drosophila melanogaster GH24627p
protein.
Length = 600
Score = 171 bits (417), Expect = 7e-43
Identities = 73/90 (81%), Positives = 84/90 (93%)
Frame = -1
Query: 807 EYTSRSLYLLHILTWVMNMFGIFFILAAHEHYSIDVFIAFYITSRLFLYYHTLSNNQALM 628
EYT R+LY LH LTW++NMFGIFFILAAHEHYSIDVF+AFYITSRLFLYYHTL+NN+ALM
Sbjct: 371 EYTPRNLYFLHTLTWLLNMFGIFFILAAHEHYSIDVFVAFYITSRLFLYYHTLANNRALM 430
Query: 627 QSDSSRTRIWFPLLSFFESEVDGIVPNEYE 538
QSDS RTR+WFP+ S+FES VDG+VPNEY+
Sbjct: 431 QSDSKRTRVWFPMFSYFESSVDGMVPNEYD 460
>AE014296-1251|AAF50568.1| 384|Drosophila melanogaster CG32380-PB,
isoform B protein.
Length = 384
Score = 171 bits (417), Expect = 7e-43
Identities = 73/90 (81%), Positives = 84/90 (93%)
Frame = -1
Query: 807 EYTSRSLYLLHILTWVMNMFGIFFILAAHEHYSIDVFIAFYITSRLFLYYHTLSNNQALM 628
EYT R+LY LH LTW++NMFGIFFILAAHEHYSIDVF+AFYITSRLFLYYHTL+NN+ALM
Sbjct: 155 EYTPRNLYFLHTLTWLLNMFGIFFILAAHEHYSIDVFVAFYITSRLFLYYHTLANNRALM 214
Query: 627 QSDSSRTRIWFPLLSFFESEVDGIVPNEYE 538
QSDS RTR+WFP+ S+FES VDG+VPNEY+
Sbjct: 215 QSDSKRTRVWFPMFSYFESSVDGMVPNEYD 244
>AE014296-1250|AAF50567.2| 600|Drosophila melanogaster CG32380-PA,
isoform A protein.
Length = 600
Score = 171 bits (417), Expect = 7e-43
Identities = 73/90 (81%), Positives = 84/90 (93%)
Frame = -1
Query: 807 EYTSRSLYLLHILTWVMNMFGIFFILAAHEHYSIDVFIAFYITSRLFLYYHTLSNNQALM 628
EYT R+LY LH LTW++NMFGIFFILAAHEHYSIDVF+AFYITSRLFLYYHTL+NN+ALM
Sbjct: 371 EYTPRNLYFLHTLTWLLNMFGIFFILAAHEHYSIDVFVAFYITSRLFLYYHTLANNRALM 430
Query: 627 QSDSSRTRIWFPLLSFFESEVDGIVPNEYE 538
QSDS RTR+WFP+ S+FES VDG+VPNEY+
Sbjct: 431 QSDSKRTRVWFPMFSYFESSVDGMVPNEYD 460
>BT022964-1|AAY55380.1| 197|Drosophila melanogaster IP04228p
protein.
Length = 197
Score = 30.7 bits (66), Expect = 2.5
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 442 FRAGDLGHRGLFDVGHHLHAPLLQVLHYGHRSLIFIGNDTVHF 570
F A DLG RG H A +L+ + HR L + VHF
Sbjct: 58 FGAADLGKRGPHRWSHKAKAQVLRAVDDNHRILFIPDGEPVHF 100
>BT022933-1|AAY55349.1| 194|Drosophila melanogaster IP04328p
protein.
Length = 194
Score = 30.7 bits (66), Expect = 2.5
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 442 FRAGDLGHRGLFDVGHHLHAPLLQVLHYGHRSLIFIGNDTVHF 570
F A DLG RG H A +L+ + HR L + VHF
Sbjct: 55 FGAADLGKRGPHRWSHKAKAQVLRAVDDNHRILFIPDGEPVHF 97
>BT004506-1|AAO42670.1| 1545|Drosophila melanogaster AT10293p
protein.
Length = 1545
Score = 30.3 bits (65), Expect = 3.2
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -1
Query: 669 FLYYHTLSNNQALMQSDSSRTRIWFPLLSFFESEVDGIVPNEY 541
F YH LS A Q+ S R+W L +S + +P +Y
Sbjct: 276 FQEYHRLSTRLARSQNSSEALRLWRQYLQHVQSFLSCAIPEDY 318
>AF495912-1|AAN60444.1| 2576|Drosophila melanogaster nesprin protein.
Length = 2576
Score = 30.3 bits (65), Expect = 3.2
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -1
Query: 669 FLYYHTLSNNQALMQSDSSRTRIWFPLLSFFESEVDGIVPNEY 541
F YH LS A Q+ S R+W L +S + +P +Y
Sbjct: 1303 FQEYHRLSTRLARSQNSSEALRLWRQYLQHVQSFLSCAIPEDY 1345
>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
isoform D protein.
Length = 11707
Score = 30.3 bits (65), Expect = 3.2
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -1
Query: 669 FLYYHTLSNNQALMQSDSSRTRIWFPLLSFFESEVDGIVPNEY 541
F YH LS A Q+ S R+W L +S + +P +Y
Sbjct: 10434 FQEYHRLSTRLARSQNSSEALRLWRQYLQHVQSFLSCAIPEDY 10476
>AF069781-1|AAC26858.1| 338|Drosophila melanogaster Bem46-like
protein protein.
Length = 338
Score = 29.1 bits (62), Expect = 7.5
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Frame = +1
Query: 424 SGALLQFR--AGDLGHR--GLFDVGHHLHAPLLQVLHYGH 531
S LL F AG++GHR ++ + HHLH +L V + G+
Sbjct: 108 SPTLLYFHGNAGNMGHRMQNVWGIYHHLHCNVLMVEYRGY 147
>AE014296-3448|AAF51661.2| 1058|Drosophila melanogaster CG10588-PA
protein.
Length = 1058
Score = 29.1 bits (62), Expect = 7.5
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Frame = -1
Query: 594 PLLSFFESEVDGIVPN--EYEGPVTIMQNLKQ--WCVQMVADVKESS 466
P+ +F+ S+ D + YEG ++ L+ WC+ +VA V ESS
Sbjct: 331 PMKNFYRSKPDMFISQLIGYEGVGSLCAYLRHHLWCISVVAGVAESS 377
>AE014134-529|AAF51169.1| 338|Drosophila melanogaster CG18642-PA
protein.
Length = 338
Score = 29.1 bits (62), Expect = 7.5
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Frame = +1
Query: 424 SGALLQFR--AGDLGHR--GLFDVGHHLHAPLLQVLHYGH 531
S LL F AG++GHR ++ + HHLH +L V + G+
Sbjct: 108 SPTLLYFHGNAGNMGHRMQNVWGIYHHLHCNVLMVEYRGY 147
>U23545-1|AAC46631.1| 546|Drosophila melanogaster Hk protein
protein.
Length = 546
Score = 28.7 bits (61), Expect = 9.9
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +2
Query: 545 SLGTIPSTSDSKNDNSGNH 601
++G IPST+DS N+N+ N+
Sbjct: 129 AMGVIPSTNDSNNNNNNNN 147
>BT023168-1|AAY55584.1| 351|Drosophila melanogaster IP03352p
protein.
Length = 351
Score = 28.7 bits (61), Expect = 9.9
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +2
Query: 353 LNSSTRLRFLLMPSTILTTEYSPIAAPSCSFEPAILATEDSLTSATICTH-HCF 511
+N + R P +I TT S I APS + LTSA T+ HC+
Sbjct: 271 INDLAKERITGGPGSISTTSASAITAPSTMSQTTTSRLAPKLTSAVSTTNIHCY 324
>BT023157-1|AAY55573.1| 351|Drosophila melanogaster IP03452p
protein.
Length = 351
Score = 28.7 bits (61), Expect = 9.9
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +2
Query: 353 LNSSTRLRFLLMPSTILTTEYSPIAAPSCSFEPAILATEDSLTSATICTH-HCF 511
+N + R P +I TT S I APS + LTSA T+ HC+
Sbjct: 271 INDLAKERITGGPGSISTTSASAITAPSTMSQTTTSRLAPKLTSAVSTTNIHCY 324
>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin protein.
Length = 16215
Score = 28.7 bits (61), Expect = 9.9
Identities = 28/139 (20%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
Frame = -1
Query: 645 NNQALMQSDSSRTRIWFPLLSFFESEVD-GIVPNEYEGPVTIMQNLKQWCVQMVADVKES 469
N L ++ SS ++ ++ +SE GIVP + P + + +
Sbjct: 8677 NIDHLYETKSSEMIVYDSSINSVDSEFPAGIVPQKSLVPFRHTMVTENVAFNASENFEIL 8736
Query: 468 SVAKIAGSKLQEGAAMGEYSVVRIVDGIKRNLSLVEEFKNSRPRLVTLDKNIQACLLDEC 289
S + + +Q+ + + +I ++NL L E +P+L+ D+N+ A L+DE
Sbjct: 8737 SADQQIATNVQDSLSQSIIAEDQIAFETEQNLGL-ETTPTHKPKLLKDDQNLHAKLVDEA 8795
Query: 288 SDHELRHRNIELPKDSLRK 232
+ +E + ++ K ++++
Sbjct: 8796 TVYEAMGQEQKVDKYNIQQ 8814
>AE014298-1426|AAF46567.3| 547|Drosophila melanogaster CG32688-PA,
isoform A protein.
Length = 547
Score = 28.7 bits (61), Expect = 9.9
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +2
Query: 545 SLGTIPSTSDSKNDNSGNH 601
++G IPST+DS N+N+ N+
Sbjct: 131 AMGVIPSTNDSNNNNNNNN 149
>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
isoform C protein.
Length = 18074
Score = 28.7 bits (61), Expect = 9.9
Identities = 28/139 (20%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
Frame = -1
Query: 645 NNQALMQSDSSRTRIWFPLLSFFESEVD-GIVPNEYEGPVTIMQNLKQWCVQMVADVKES 469
N L ++ SS ++ ++ +SE GIVP + P + + +
Sbjct: 8677 NIDHLYETKSSEMIVYDSSINSVDSEFPAGIVPQKSLVPFRHTMVTENVAFNASENFEIL 8736
Query: 468 SVAKIAGSKLQEGAAMGEYSVVRIVDGIKRNLSLVEEFKNSRPRLVTLDKNIQACLLDEC 289
S + + +Q+ + + +I ++NL L E +P+L+ D+N+ A L+DE
Sbjct: 8737 SADQQIATNVQDSLSQSIIAEDQIAFETEQNLGL-ETTPTHKPKLLKDDQNLHAKLVDEA 8795
Query: 288 SDHELRHRNIELPKDSLRK 232
+ +E + ++ K ++++
Sbjct: 8796 TVYEAMGQEQKVDKYNIQQ 8814
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,856,027
Number of Sequences: 53049
Number of extensions: 767138
Number of successful extensions: 2362
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2362
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3777934368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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