Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt17i08
         (846 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D78151-1|BAA11226.1|  908|Homo sapiens human 26S proteasome subu...   152   2e-36
BT009736-1|AAP88738.1|  908|Homo sapiens proteasome (prosome, ma...   152   2e-36
BC007897-1|AAH07897.1|  908|Homo sapiens proteasome (prosome, ma...   152   2e-36
BC002997-1|AAH02997.1|  908|Homo sapiens proteasome (prosome, ma...   152   2e-36
BC002368-1|AAH02368.1|  908|Homo sapiens proteasome (prosome, ma...   152   2e-36
AB209843-1|BAD93080.1|  913|Homo sapiens proteasome 26S non-ATPa...   152   2e-36
X86446-1|CAA60167.1|  900|Homo sapiens 55.11 protein protein.         145   2e-34
U18247-1|AAA57339.1|  591|Homo sapiens p67 protein.                   145   2e-34
U12596-1|AAA87705.1|  853|Homo sapiens tumor necrosis factor typ...   145   2e-34

>D78151-1|BAA11226.1|  908|Homo sapiens human 26S proteasome subunit
            p97 protein.
          Length = 908

 Score =  152 bits (368), Expect = 2e-36
 Identities = 70/96 (72%), Positives = 84/96 (87%)
 Frame = -1

Query: 327  SVILGKSHYLLYVLATAMQPRWLVTLDENLQPLNVSVRVGQAVDVIGKAGTPKTIAGSHT 148
            ++ILGKSHY+LY L  AMQPR LVT DE L+PL VSVRVGQAVDV+G+AG PKTI G  T
Sbjct: 808  NIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQT 867

Query: 147  HTTPVLLSFGERAELATDEYIPLSPIMEGFVILKKN 40
            HTTPVLL+ GERAELAT+E++P++PI+EGFVIL+KN
Sbjct: 868  HTTPVLLAHGERAELATEEFLPVTPILEGFVILRKN 903


>BT009736-1|AAP88738.1|  908|Homo sapiens proteasome (prosome,
            macropain) 26S subunit, non-ATPase, 2 protein.
          Length = 908

 Score =  152 bits (368), Expect = 2e-36
 Identities = 70/96 (72%), Positives = 84/96 (87%)
 Frame = -1

Query: 327  SVILGKSHYLLYVLATAMQPRWLVTLDENLQPLNVSVRVGQAVDVIGKAGTPKTIAGSHT 148
            ++ILGKSHY+LY L  AMQPR LVT DE L+PL VSVRVGQAVDV+G+AG PKTI G  T
Sbjct: 808  NIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQT 867

Query: 147  HTTPVLLSFGERAELATDEYIPLSPIMEGFVILKKN 40
            HTTPVLL+ GERAELAT+E++P++PI+EGFVIL+KN
Sbjct: 868  HTTPVLLAHGERAELATEEFLPVTPILEGFVILRKN 903


>BC007897-1|AAH07897.1|  908|Homo sapiens proteasome (prosome,
            macropain) 26S subunit, non-ATPase, 2 protein.
          Length = 908

 Score =  152 bits (368), Expect = 2e-36
 Identities = 70/96 (72%), Positives = 84/96 (87%)
 Frame = -1

Query: 327  SVILGKSHYLLYVLATAMQPRWLVTLDENLQPLNVSVRVGQAVDVIGKAGTPKTIAGSHT 148
            ++ILGKSHY+LY L  AMQPR LVT DE L+PL VSVRVGQAVDV+G+AG PKTI G  T
Sbjct: 808  NIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQT 867

Query: 147  HTTPVLLSFGERAELATDEYIPLSPIMEGFVILKKN 40
            HTTPVLL+ GERAELAT+E++P++PI+EGFVIL+KN
Sbjct: 868  HTTPVLLAHGERAELATEEFLPVTPILEGFVILRKN 903


>BC002997-1|AAH02997.1|  908|Homo sapiens proteasome (prosome,
            macropain) 26S subunit, non-ATPase, 2 protein.
          Length = 908

 Score =  152 bits (368), Expect = 2e-36
 Identities = 70/96 (72%), Positives = 84/96 (87%)
 Frame = -1

Query: 327  SVILGKSHYLLYVLATAMQPRWLVTLDENLQPLNVSVRVGQAVDVIGKAGTPKTIAGSHT 148
            ++ILGKSHY+LY L  AMQPR LVT DE L+PL VSVRVGQAVDV+G+AG PKTI G  T
Sbjct: 808  NIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQT 867

Query: 147  HTTPVLLSFGERAELATDEYIPLSPIMEGFVILKKN 40
            HTTPVLL+ GERAELAT+E++P++PI+EGFVIL+KN
Sbjct: 868  HTTPVLLAHGERAELATEEFLPVTPILEGFVILRKN 903


>BC002368-1|AAH02368.1|  908|Homo sapiens proteasome (prosome,
            macropain) 26S subunit, non-ATPase, 2 protein.
          Length = 908

 Score =  152 bits (368), Expect = 2e-36
 Identities = 70/96 (72%), Positives = 84/96 (87%)
 Frame = -1

Query: 327  SVILGKSHYLLYVLATAMQPRWLVTLDENLQPLNVSVRVGQAVDVIGKAGTPKTIAGSHT 148
            ++ILGKSHY+LY L  AMQPR LVT DE L+PL VSVRVGQAVDV+G+AG PKTI G  T
Sbjct: 808  NIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQT 867

Query: 147  HTTPVLLSFGERAELATDEYIPLSPIMEGFVILKKN 40
            HTTPVLL+ GERAELAT+E++P++PI+EGFVIL+KN
Sbjct: 868  HTTPVLLAHGERAELATEEFLPVTPILEGFVILRKN 903


>AB209843-1|BAD93080.1|  913|Homo sapiens proteasome 26S non-ATPase
            subunit 2 variant protein.
          Length = 913

 Score =  152 bits (368), Expect = 2e-36
 Identities = 70/96 (72%), Positives = 84/96 (87%)
 Frame = -1

Query: 327  SVILGKSHYLLYVLATAMQPRWLVTLDENLQPLNVSVRVGQAVDVIGKAGTPKTIAGSHT 148
            ++ILGKSHY+LY L  AMQPR LVT DE L+PL VSVRVGQAVDV+G+AG PKTI G  T
Sbjct: 813  NIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQT 872

Query: 147  HTTPVLLSFGERAELATDEYIPLSPIMEGFVILKKN 40
            HTTPVLL+ GERAELAT+E++P++PI+EGFVIL+KN
Sbjct: 873  HTTPVLLAHGERAELATEEFLPVTPILEGFVILRKN 908


>X86446-1|CAA60167.1|  900|Homo sapiens 55.11 protein protein.
          Length = 900

 Score =  145 bits (351), Expect = 2e-34
 Identities = 67/92 (72%), Positives = 80/92 (86%)
 Frame = -1

Query: 327  SVILGKSHYLLYVLATAMQPRWLVTLDENLQPLNVSVRVGQAVDVIGKAGTPKTIAGSHT 148
            ++ILGKSHY+LY L  AMQPR LVT DE L+PL VSVRVGQAVDV+G+AG PKTI G  T
Sbjct: 799  NIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQT 858

Query: 147  HTTPVLLSFGERAELATDEYIPLSPIMEGFVI 52
            HTTPVLL+ GERAELAT+E++P++PI+EGFVI
Sbjct: 859  HTTPVLLAHGERAELATEEFLPVTPILEGFVI 890


>U18247-1|AAA57339.1|  591|Homo sapiens p67 protein.
          Length = 591

 Score =  145 bits (351), Expect = 2e-34
 Identities = 67/92 (72%), Positives = 80/92 (86%)
 Frame = -1

Query: 327 SVILGKSHYLLYVLATAMQPRWLVTLDENLQPLNVSVRVGQAVDVIGKAGTPKTIAGSHT 148
           ++ILGKSHY+LY L  AMQPR LVT DE L+PL VSVRVGQAVDV+G+AG PKTI G  T
Sbjct: 490 NIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQT 549

Query: 147 HTTPVLLSFGERAELATDEYIPLSPIMEGFVI 52
           HTTPVLL+ GERAELAT+E++P++PI+EGFVI
Sbjct: 550 HTTPVLLAHGERAELATEEFLPVTPILEGFVI 581


>U12596-1|AAA87705.1|  853|Homo sapiens tumor necrosis factor type 1
            receptor associated protein protein.
          Length = 853

 Score =  145 bits (351), Expect = 2e-34
 Identities = 67/92 (72%), Positives = 80/92 (86%)
 Frame = -1

Query: 327  SVILGKSHYLLYVLATAMQPRWLVTLDENLQPLNVSVRVGQAVDVIGKAGTPKTIAGSHT 148
            ++ILGKSHY+LY L  AMQPR LVT DE L+PL VSVRVGQAVDV+G+AG PKTI G  T
Sbjct: 752  NIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQT 811

Query: 147  HTTPVLLSFGERAELATDEYIPLSPIMEGFVI 52
            HTTPVLL+ GERAELAT+E++P++PI+EGFVI
Sbjct: 812  HTTPVLLAHGERAELATEEFLPVTPILEGFVI 843


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,193,365
Number of Sequences: 237096
Number of extensions: 3101827
Number of successful extensions: 5847
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5847
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)