Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17i08
(846 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 24 1.5
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 3.5
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 3.5
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 3.5
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 3.5
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 3.5
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 3.5
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 3.5
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 4.7
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 23 4.7
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 23 4.7
AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding pr... 23 4.7
DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2 pr... 22 6.2
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 22 6.2
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 24.2 bits (50), Expect = 1.5
Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Frame = -1
Query: 249 DENLQPLNVSVRVGQAVDVIGKAGTPKTIAGSHTHTTP-VLLSFGERAELATDEYIPLSP 73
+ L+P + V VG+ G A ++ AGS +TP + + G L P
Sbjct: 179 ERRLRPDEIKVEVGEDEFANGGAARDESKAGSTDASTPATVTTTGATTTLPAASATGTGP 238
Query: 72 IMEGFVILKKNEDSVMAS 19
V+ N + M +
Sbjct: 239 ATPSAVVATSNATAAMTT 256
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.5
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -3
Query: 418 FNYIPFKTYQNNNNDDIMHYIVLCVLTRFIFSNPRQIPLLAVRIGDCDATPL 263
+NY + Y NNNN + +Y L +I P +P + + G+ + P+
Sbjct: 89 YNYSNYNNYNNNNNYN--NYKKLYYNINYIEQIPVPVP-VPIYCGNFPSRPM 137
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.5
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -3
Query: 418 FNYIPFKTYQNNNNDDIMHYIVLCVLTRFIFSNPRQIPLLAVRIGDCDATPL 263
+NY + Y NNNN + +Y L +I P +P + + G+ + P+
Sbjct: 89 YNYSNYNNYNNNNNYN--NYKKLYYNINYIEQIPVPVP-VPIYCGNFPSRPM 137
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.5
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -3
Query: 418 FNYIPFKTYQNNNNDDIMHYIVLCVLTRFIFSNPRQIPLLAVRIGDCDATPL 263
+NY + Y NNNN + +Y L +I P +P + + G+ + P+
Sbjct: 89 YNYSNYNNYNNNNNYN--NYKKLYYNINYIEQIPVPVP-VPIYCGNFPSRPM 137
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.5
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -3
Query: 418 FNYIPFKTYQNNNNDDIMHYIVLCVLTRFIFSNPRQIPLLAVRIGDCDATPL 263
+NY + Y NNNN + +Y L +I P +P + + G+ + P+
Sbjct: 89 YNYSNYNNYNNNNNYN--NYKKLYYNINYIEQIPVPVP-VPIYCGNFPSRPM 137
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.5
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -3
Query: 418 FNYIPFKTYQNNNNDDIMHYIVLCVLTRFIFSNPRQIPLLAVRIGDCDATPL 263
+NY + Y NNNN + +Y L +I P +P + + G+ + P+
Sbjct: 89 YNYSNYNNYNNNNNYN--NYKKLYYNINYIEQIPVPVP-VPIYCGNFPSRPM 137
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.5
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -3
Query: 418 FNYIPFKTYQNNNNDDIMHYIVLCVLTRFIFSNPRQIPLLAVRIGDCDATPL 263
+NY + Y NNNN + +Y L +I P +P + + G+ + P+
Sbjct: 89 YNYSNYNNYNNNNNYN--NYKKLYYNINYIEQIPVPVP-VPIYCGNFPSRPM 137
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.5
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -3
Query: 418 FNYIPFKTYQNNNNDDIMHYIVLCVLTRFIFSNPRQIPLLAVRIGDCDATPL 263
+NY + Y NNNN + +Y L +I P +P + + G+ + P+
Sbjct: 89 YNYSNYNNYNNNNNYN--NYKKLYYNINYIEQIPVPVP-VPIYCGNFPSRPM 137
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 4.7
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -3
Query: 418 FNYIPFKTYQNNNN 377
+NY + Y NNNN
Sbjct: 89 YNYSNYNNYNNNNN 102
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -3
Query: 427 IVKFNYIPFKTYQNNNNDDIMHYIVL 350
I+ N +K Y NN N ++Y ++
Sbjct: 303 IISSNNYNYKNYNNNYNSKKLYYNII 328
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -3
Query: 427 IVKFNYIPFKTYQNNNNDDIMHYIVL 350
I+ N +K Y NN N ++Y ++
Sbjct: 314 IISSNNYNYKNYNNNYNSKKLYYNII 339
>AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding
protein protein.
Length = 132
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -3
Query: 403 FKTYQNNNNDDIMHYIVLCVLTRFIFSN 320
+K Y + N DD M + + ++TR + S+
Sbjct: 9 YKLYSSENFDDFMKALGVGIMTRKVGSS 36
>DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2
precursor protein.
Length = 175
Score = 22.2 bits (45), Expect = 6.2
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = -3
Query: 571 TASRPK*VEWWYLPVRTHKRSYHKYRASYI 482
T RP ++ WY ++TH + + A +
Sbjct: 30 TLLRPNFLDGWYQTLQTHMKKVREQMAGIL 59
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 22.2 bits (45), Expect = 6.2
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +2
Query: 773 ISATNPCVFQGSTV 814
+S+ NPC+F +T+
Sbjct: 230 MSSINPCIFDNATI 243
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 257,890
Number of Sequences: 438
Number of extensions: 6756
Number of successful extensions: 26
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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