Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt17h23
         (659 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK124803-1|BAC85953.1|  180|Homo sapiens protein ( Homo sapiens ...    31   2.8  
Y10387-1|CAA71413.1|  624|Homo sapiens PAPS sunthetase protein.        31   4.8  
U53447-1|AAC39894.1|  623|Homo sapiens PAPS synthase protein.          31   4.8  
CR457028-1|CAG33309.1|  624|Homo sapiens PAPSS1 protein.               31   4.8  
BC050627-1|AAH50627.1|  624|Homo sapiens 3'-phosphoadenosine 5'-...    31   4.8  
BC032513-1|AAH32513.1|  571|Homo sapiens PAPSS1 protein protein.       31   4.8  
BC011392-1|AAH11392.1|  603|Homo sapiens PAPSS1 protein protein.       31   4.8  
AF105227-1|AAF40236.1|  624|Homo sapiens 3'-phosphoadenosine 5'-...    31   4.8  
AF097721-1|AAF40235.1|  624|Homo sapiens 3'-phosphoadenosine 5'-...    31   4.8  
AF033026-1|AAC28429.1|  624|Homo sapiens bifunctional ATP sulfur...    31   4.8  
AF016496-1|AAD09325.1|  624|Homo sapiens ATP sulfurylase/APS kin...    31   4.8  

>AK124803-1|BAC85953.1|  180|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42813 fis, clone BRCAN2012355. ).
          Length = 180

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
 Frame = +2

Query: 395 ICTIT-INWYVYIIIHHCILIKHNVSLVRVL--CKYITILFYRWFTCVTQYASSVGRICI 565
           +C  T I  Y+Y  IH C+ I   VS+   +  C  I I  Y  + C   Y  +   ICI
Sbjct: 93  MCVYTYIYVYIYTHIHICVHINMYVSIYVYIYTCIQIYIYMYTLYVCTYTYMCTYIHICI 152


>Y10387-1|CAA71413.1|  624|Homo sapiens PAPS sunthetase protein.
          Length = 624

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +1

Query: 241 DRGRILLFSIICLSIVDSTSSGLICYGSDLTIGVIYCVDAPFIICSQMDVRDMY 402
           D G + + S I     D  ++  I  G+ L    ++ VDAP  +C Q DV+ +Y
Sbjct: 122 DAGLVCITSFISPYTQDRNNARQIHEGASLPFFEVF-VDAPLHVCEQRDVKGLY 174


>U53447-1|AAC39894.1|  623|Homo sapiens PAPS synthase protein.
          Length = 623

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +1

Query: 241 DRGRILLFSIICLSIVDSTSSGLICYGSDLTIGVIYCVDAPFIICSQMDVRDMY 402
           D G + + S I     D  ++  I  G+ L    ++ VDAP  +C Q DV+ +Y
Sbjct: 122 DAGLVCITSFISPYTQDRNNARQIHEGASLPFFEVF-VDAPLHVCEQRDVKGLY 174


>CR457028-1|CAG33309.1|  624|Homo sapiens PAPSS1 protein.
          Length = 624

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +1

Query: 241 DRGRILLFSIICLSIVDSTSSGLICYGSDLTIGVIYCVDAPFIICSQMDVRDMY 402
           D G + + S I     D  ++  I  G+ L    ++ VDAP  +C Q DV+ +Y
Sbjct: 122 DAGLVCITSFISPYTQDRNNARQIHEGASLPFFEVF-VDAPLHVCEQRDVKGLY 174


>BC050627-1|AAH50627.1|  624|Homo sapiens 3'-phosphoadenosine
           5'-phosphosulfate synthase 1 protein.
          Length = 624

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +1

Query: 241 DRGRILLFSIICLSIVDSTSSGLICYGSDLTIGVIYCVDAPFIICSQMDVRDMY 402
           D G + + S I     D  ++  I  G+ L    ++ VDAP  +C Q DV+ +Y
Sbjct: 122 DAGLVCITSFISPYTQDRNNARQIHEGASLPFFEVF-VDAPLHVCEQRDVKGLY 174


>BC032513-1|AAH32513.1|  571|Homo sapiens PAPSS1 protein protein.
          Length = 571

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +1

Query: 241 DRGRILLFSIICLSIVDSTSSGLICYGSDLTIGVIYCVDAPFIICSQMDVRDMY 402
           D G + + S I     D  ++  I  G+ L    ++ VDAP  +C Q DV+ +Y
Sbjct: 122 DAGLVCITSFISPYTQDRNNARQIHEGASLPFFEVF-VDAPLHVCEQRDVKGLY 174


>BC011392-1|AAH11392.1|  603|Homo sapiens PAPSS1 protein protein.
          Length = 603

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +1

Query: 241 DRGRILLFSIICLSIVDSTSSGLICYGSDLTIGVIYCVDAPFIICSQMDVRDMY 402
           D G + + S I     D  ++  I  G+ L    ++ VDAP  +C Q DV+ +Y
Sbjct: 101 DAGLVCITSFISPYTQDRNNARQIHEGASLPFFEVF-VDAPLHVCEQRDVKGLY 153


>AF105227-1|AAF40236.1|  624|Homo sapiens 3'-phosphoadenosine
           5'-phosphosulfate synthetase protein.
          Length = 624

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +1

Query: 241 DRGRILLFSIICLSIVDSTSSGLICYGSDLTIGVIYCVDAPFIICSQMDVRDMY 402
           D G + + S I     D  ++  I  G+ L    ++ VDAP  +C Q DV+ +Y
Sbjct: 122 DAGLVCITSFISPYTQDRNNARQIHEGASLPFFEVF-VDAPLHVCEQRDVKGLY 174


>AF097721-1|AAF40235.1|  624|Homo sapiens 3'-phosphoadenosine
           5'-phosphosulfate synthetase protein.
          Length = 624

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +1

Query: 241 DRGRILLFSIICLSIVDSTSSGLICYGSDLTIGVIYCVDAPFIICSQMDVRDMY 402
           D G + + S I     D  ++  I  G+ L    ++ VDAP  +C Q DV+ +Y
Sbjct: 122 DAGLVCITSFISPYTQDRNNARQIHEGASLPFFEVF-VDAPLHVCEQRDVKGLY 174


>AF033026-1|AAC28429.1|  624|Homo sapiens bifunctional ATP
           sulfurylase/adenosine 5'-phosphosulfate kinase protein.
          Length = 624

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +1

Query: 241 DRGRILLFSIICLSIVDSTSSGLICYGSDLTIGVIYCVDAPFIICSQMDVRDMY 402
           D G + + S I     D  ++  I  G+ L    ++ VDAP  +C Q DV+ +Y
Sbjct: 122 DAGLVCITSFISPYTQDRNNARQIHEGASLPFFEVF-VDAPLHVCEQRDVKGLY 174


>AF016496-1|AAD09325.1|  624|Homo sapiens ATP sulfurylase/APS kinase
           protein.
          Length = 624

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +1

Query: 241 DRGRILLFSIICLSIVDSTSSGLICYGSDLTIGVIYCVDAPFIICSQMDVRDMY 402
           D G + + S I     D  ++  I  G+ L    ++ VDAP  +C Q DV+ +Y
Sbjct: 122 DAGLVCITSFISPYTQDRNNARQIHEGASLPFFEVF-VDAPLHVCEQRDVKGLY 174


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,995,379
Number of Sequences: 237096
Number of extensions: 1658906
Number of successful extensions: 2101
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2100
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)