Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17h02
(862 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 87 2e-17
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 87 2e-17
AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical... 62 4e-10
Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 58 6e-09
X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 58 6e-09
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 55 6e-08
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 55 6e-08
Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical pr... 52 7e-07
U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical pr... 48 7e-06
AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math ... 48 9e-06
Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C pr... 44 1e-04
U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin rela... 43 2e-04
Z46793-3|CAA86772.1| 172|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z34801-8|CAA84331.1| 172|Caenorhabditis elegans Hypothetical pr... 40 0.002
L14433-5|AAA27976.2| 202|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical pr... 40 0.002
U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified vi... 40 0.003
U88165-10|AAK21395.1| 161|Caenorhabditis elegans Paralysed arre... 38 0.009
U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical pr... 38 0.009
D45896-1|BAA82524.1| 161|Caenorhabditis elegans troponin C prot... 38 0.009
D45895-1|BAA82523.1| 161|Caenorhabditis elegans troponin C prot... 38 0.009
U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light c... 37 0.016
L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin l... 37 0.016
Z12017-4|CAA78051.2| 148|Caenorhabditis elegans Hypothetical pr... 36 0.037
Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical pr... 35 0.086
Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical pr... 32 0.46
Z70783-6|CAA94856.1| 195|Caenorhabditis elegans Hypothetical pr... 32 0.60
Z81072-1|CAB03019.1| 311|Caenorhabditis elegans Hypothetical pr... 31 0.80
U41625-4|ABC71830.1| 43|Caenorhabditis elegans Hypothetical pr... 31 1.4
U41625-3|AAA83326.1| 264|Caenorhabditis elegans Hypothetical pr... 31 1.4
U40427-2|AAA81468.2| 159|Caenorhabditis elegans Hypothetical pr... 31 1.4
AF016435-6|AAB65882.1| 213|Caenorhabditis elegans Hypothetical ... 31 1.4
AC024858-1|AAF60872.2| 196|Caenorhabditis elegans Hypothetical ... 31 1.4
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 30 1.8
Z81568-13|CAH10811.1| 153|Caenorhabditis elegans Hypothetical p... 29 3.2
Z74036-5|CAA98489.3| 171|Caenorhabditis elegans Hypothetical pr... 29 4.3
AY190131-1|AAO33925.1| 171|Caenorhabditis elegans CNB-1 protein. 29 4.3
U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical pr... 29 5.6
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr... 29 5.6
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical pr... 28 7.4
U88169-4|AAB42239.2| 81|Caenorhabditis elegans Hypothetical pr... 28 9.8
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 86.6 bits (205), Expect = 2e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 738
VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMT+K
Sbjct: 109 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTTK 149
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 738
VM +LG+ T+ E+ +MI E D DG+G +++ EF+TMM K
Sbjct: 36 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 76
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 86.6 bits (205), Expect = 2e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 738
VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMT+K
Sbjct: 109 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTTK 149
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 738
VM +LG+ T+ E+ +MI E D DG+G +++ EF+TMM K
Sbjct: 36 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 76
>AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical
protein Y73B3A.12 protein.
Length = 116
Score = 62.5 bits (145), Expect = 4e-10
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQV 774
VMTNLGEKLTDEEVDEMIREADIDGDGQ+
Sbjct: 58 VMTNLGEKLTDEEVDEMIREADIDGDGQI 86
Score = 32.3 bits (70), Expect = 0.46
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -3
Query: 812 MIREADIDGDGQVNYEEFVTMMTSK 738
MI E D DG+G +++ EF+T+M K
Sbjct: 1 MINEVDADGNGTIDFPEFLTVMARK 25
>Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical
protein C13C12.1 protein.
Length = 218
Score = 58.4 bits (135), Expect = 6e-09
Identities = 22/40 (55%), Positives = 35/40 (87%)
Frame = -3
Query: 857 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 738
M ++G + ++EEVDEMI+E D+DGDG+++YEEFV MM+++
Sbjct: 179 MVHMGMQFSEEEVDEMIKEVDVDGDGEIDYEEFVKMMSNQ 218
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = -3
Query: 857 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 747
M +LG+ T++E+ EMI E DIDG+GQ+ + EF MM
Sbjct: 107 MRSLGQNPTEQEILEMINEVDIDGNGQIEFPEFCVMM 143
>X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein.
Length = 161
Score = 58.4 bits (135), Expect = 6e-09
Identities = 22/40 (55%), Positives = 35/40 (87%)
Frame = -3
Query: 857 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 738
M ++G + ++EEVDEMI+E D+DGDG+++YEEFV MM+++
Sbjct: 122 MVHMGMQFSEEEVDEMIKEVDVDGDGEIDYEEFVKMMSNQ 161
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = -3
Query: 857 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 747
M +LG+ T++E+ EMI E DIDG+GQ+ + EF MM
Sbjct: 50 MRSLGQNPTEQEILEMINEVDIDGNGQIEFPEFCVMM 86
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 55.2 bits (127), Expect = 6e-08
Identities = 21/39 (53%), Positives = 33/39 (84%)
Frame = -3
Query: 857 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 741
MT++G++ +D+EVDE+I E DIDGDGQ++YEEF + ++
Sbjct: 133 MTHMGDQFSDQEVDEIIAEIDIDGDGQIDYEEFASTFSA 171
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = -3
Query: 857 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 747
M +LG+ T++E+ +M+ E DIDG G +++ EF MM
Sbjct: 61 MRSLGQNPTEQELLDMVNEVDIDGSGTIDFGEFCQMM 97
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 55.2 bits (127), Expect = 6e-08
Identities = 21/39 (53%), Positives = 33/39 (84%)
Frame = -3
Query: 857 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 741
MT++G++ +D+EVDE+I E DIDGDGQ++YEEF + ++
Sbjct: 133 MTHMGDQFSDQEVDEIIAEIDIDGDGQIDYEEFASTFSA 171
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = -3
Query: 857 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 747
M +LG+ T++E+ +M+ E DIDG G +++ EF MM
Sbjct: 61 MRSLGQNPTEQELLDMVNEVDIDGSGTIDFGEFCQMM 97
>Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical
protein T07G12.1 protein.
Length = 182
Score = 51.6 bits (118), Expect = 7e-07
Identities = 21/37 (56%), Positives = 30/37 (81%)
Frame = -3
Query: 857 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 747
MT +GE+ ++EEVDE+IRE D DGD Q++ +EFV M+
Sbjct: 121 MTTMGERFSEEEVDEIIREVDKDGDEQIDLDEFVNMV 157
Score = 37.9 bits (84), Expect = 0.009
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = -3
Query: 857 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 747
M LG T+EE+ M+ E D+DG+G++++ EF MM
Sbjct: 49 MRMLGLNPTEEELLNMVNEYDVDGNGKIDFGEFCKMM 85
>U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical
protein F12A10.5 protein.
Length = 145
Score = 48.4 bits (110), Expect = 7e-06
Identities = 19/38 (50%), Positives = 29/38 (76%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 747
VM LGEKLT+ E EMI++ D+D DG ++++EFV ++
Sbjct: 105 VMCQLGEKLTETEAKEMIKQGDLDHDGMIDFQEFVNII 142
Score = 38.7 bits (86), Expect = 0.005
Identities = 13/37 (35%), Positives = 28/37 (75%)
Frame = -3
Query: 857 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 747
+ LGEK ++ +++ MI +AD+DG+G ++ +EF+ ++
Sbjct: 33 LLQLGEKASNSKIETMIEQADLDGNGCIDIDEFLNVL 69
>AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math
domain containingprotein 25 protein.
Length = 364
Score = 48.0 bits (109), Expect = 9e-06
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 756
VMTNL LT+EE+D+ IR ADI GDG V+ EEF+
Sbjct: 304 VMTNLQAWLTEEEIDDGIRSADISGDGLVDLEEFI 338
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = -3
Query: 833 TDEEVDEMIREADIDGDGQVNYEEFVTMMTS 741
T+EE+ ++ ++ D DGDG ++ E +MT+
Sbjct: 277 TEEEIRKVFQDLDKDGDGFISVAELQAVMTN 307
>Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical
protein ZK673.7 protein.
Length = 160
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/41 (41%), Positives = 30/41 (73%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 738
++ L + +++EE+DEMI E D DG G V+++EF+ MM+ +
Sbjct: 120 ILRALDDNVSEEELDEMIAEIDADGSGTVDFDEFMEMMSGE 160
Score = 37.5 bits (83), Expect = 0.012
Identities = 11/40 (27%), Positives = 26/40 (65%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 741
++ +G+ + ++ ++I+E D DG G++ +EEF M+ +
Sbjct: 43 ILRTMGQAFEERDLKQLIKEFDADGSGEIEFEEFAAMVAN 82
>AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C
protein.
Length = 160
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/41 (41%), Positives = 30/41 (73%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 738
++ L + +++EE+DEMI E D DG G V+++EF+ MM+ +
Sbjct: 120 ILRALDDNVSEEELDEMIAEIDADGSGTVDFDEFMEMMSGE 160
Score = 37.5 bits (83), Expect = 0.012
Identities = 11/40 (27%), Positives = 26/40 (65%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 741
++ +G+ + ++ ++I+E D DG G++ +EEF M+ +
Sbjct: 43 ILRTMGQAFEERDLKQLIKEFDADGSGEIEFEEFAAMVAN 82
>U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin related
genes protein 3 protein.
Length = 164
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = -3
Query: 857 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMT 744
M N+G + EV+EM+ E D DG+G+++YEEFV + +
Sbjct: 127 MINMGMCFDEVEVEEMMNEVDCDGNGEIDYEEFVKIFS 164
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = -3
Query: 857 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 747
M LG+ T++++ E+I + D+DG+GQV + EF MM
Sbjct: 55 MRALGQNPTEQQMMEIIHDVDLDGNGQVEFPEFCVMM 91
>Z46793-3|CAA86772.1| 172|Caenorhabditis elegans Hypothetical
protein C56G7.1 protein.
Length = 172
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/38 (44%), Positives = 28/38 (73%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 747
++T +GE+ ++E+VDE+ R+A I G GQ +Y EF M+
Sbjct: 126 LLTTMGERYSEEQVDELFRDAPIKG-GQFDYVEFTRML 162
>Z34801-8|CAA84331.1| 172|Caenorhabditis elegans Hypothetical
protein C56G7.1 protein.
Length = 172
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/38 (44%), Positives = 28/38 (73%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 747
++T +GE+ ++E+VDE+ R+A I G GQ +Y EF M+
Sbjct: 126 LLTTMGERYSEEQVDELFRDAPIKG-GQFDYVEFTRML 162
>L14433-5|AAA27976.2| 202|Caenorhabditis elegans Hypothetical
protein C50C3.5 protein.
Length = 202
Score = 40.3 bits (90), Expect = 0.002
Identities = 15/41 (36%), Positives = 29/41 (70%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 738
++ LG ++ + V ++R +D+ GDGQ+++EEF+ +TSK
Sbjct: 75 MLNELGIDVSPKVVQAVMRSSDVSGDGQIDFEEFLAAVTSK 115
>Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical
protein E02A10.3 protein.
Length = 202
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/38 (36%), Positives = 27/38 (71%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 747
++ LG+ ++ +DE+ EAD+DG+G ++Y+EF M+
Sbjct: 155 ILRELGDITDNQIIDEIFNEADVDGNGVIDYDEFTYMV 192
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/35 (40%), Positives = 25/35 (71%)
Frame = -3
Query: 851 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 747
NLG + T +E+D++I E D G+ Q++++EF +M
Sbjct: 84 NLGLEQTRDELDKIIDEVDQRGNHQIDFDEFCVVM 118
>U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 2 protein.
Length = 156
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = -3
Query: 848 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 738
+G L+D+++ + R D + DG++N++EF MMT K
Sbjct: 119 MGHSLSDQDIKAIYRHVDQNNDGKINFQEFCEMMTRK 155
Score = 37.9 bits (84), Expect = 0.009
Identities = 14/37 (37%), Positives = 26/37 (70%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 750
VM +G+ T++E+D M + AD D DG ++++EF+ +
Sbjct: 46 VMQKMGQSPTEDELDAMFQAADKDCDGNIDFQEFLVI 82
>U88165-10|AAK21395.1| 161|Caenorhabditis elegans Paralysed arrest
at two-fold protein10 protein.
Length = 161
Score = 37.9 bits (84), Expect = 0.009
Identities = 13/41 (31%), Positives = 27/41 (65%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 738
++ + + LTD++++E + E D DG G++ +EEF +M +
Sbjct: 119 LLKEIADDLTDQQLEEAVDEIDEDGSGKIEFEEFWELMAGE 159
Score = 28.7 bits (61), Expect = 5.6
Identities = 9/38 (23%), Positives = 24/38 (63%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 747
+M + + ++ + ++IR+ D DG G++ ++EF ++
Sbjct: 43 IMHGMEQDFDEKTLRKLIRKFDADGSGKLEFDEFCALV 80
>U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical
protein B0563.7 protein.
Length = 229
Score = 37.9 bits (84), Expect = 0.009
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = -3
Query: 857 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 747
M ++G E+D +I+E D DG+G++++EEF M
Sbjct: 77 MISIGLHANKAEIDNVIKEVDADGNGEIDFEEFCACM 113
>D45896-1|BAA82524.1| 161|Caenorhabditis elegans troponin C
protein.
Length = 161
Score = 37.9 bits (84), Expect = 0.009
Identities = 13/41 (31%), Positives = 27/41 (65%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 738
++ + + LTD++++E + E D DG G++ +EEF +M +
Sbjct: 119 LLKEIADDLTDQQLEEAVDEIDEDGSGKIEFEEFWELMAGE 159
Score = 28.7 bits (61), Expect = 5.6
Identities = 9/38 (23%), Positives = 24/38 (63%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 747
+M + + ++ + ++IR+ D DG G++ ++EF ++
Sbjct: 43 IMHGMEQDFDEKTLRKLIRKFDADGSGKLEFDEFCALV 80
>D45895-1|BAA82523.1| 161|Caenorhabditis elegans troponin C
protein.
Length = 161
Score = 37.9 bits (84), Expect = 0.009
Identities = 13/41 (31%), Positives = 27/41 (65%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 738
++ + + LTD++++E + E D DG G++ +EEF +M +
Sbjct: 119 LLKEIADDLTDQQLEEAVDEIDEDGSGKIEFEEFWELMAGE 159
Score = 28.7 bits (61), Expect = 5.6
Identities = 9/38 (23%), Positives = 24/38 (63%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 747
+M + + ++ + ++IR+ D DG G++ ++EF ++
Sbjct: 43 IMHGMEQDFDEKTLRKLIRKFDADGSGKLEFDEFCALV 80
>U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light
chain protein 3, isoforma protein.
Length = 153
Score = 37.1 bits (82), Expect = 0.016
Identities = 14/35 (40%), Positives = 26/35 (74%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 756
++ LGE+L+ +E DE+++ + DG+G V YE+F+
Sbjct: 108 ILLALGERLSADEADELLKGVE-DGEGMVKYEDFI 141
>L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin
light chain protein.
Length = 153
Score = 37.1 bits (82), Expect = 0.016
Identities = 14/35 (40%), Positives = 26/35 (74%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 756
++ LGE+L+ +E DE+++ + DG+G V YE+F+
Sbjct: 108 ILLALGERLSADEADELLKGVE-DGEGMVKYEDFI 141
>Z12017-4|CAA78051.2| 148|Caenorhabditis elegans Hypothetical
protein R08D7.5 protein.
Length = 148
Score = 35.9 bits (79), Expect = 0.037
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 747
V LGE L D + DEMIREA D + +N ++F +M
Sbjct: 105 VAKELGETLADADFDEMIREAGGDNNTGINEQQFFEIM 142
>Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical
protein T12D8.6 protein.
Length = 142
Score = 34.7 bits (76), Expect = 0.086
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 756
++T LGE+L+DE+VD+++ D G VN +FV
Sbjct: 103 LLTTLGERLSDEDVDQLL-SGHNDSHGNVNISDFV 136
>Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical
protein K04C1.4 protein.
Length = 143
Score = 32.3 bits (70), Expect = 0.46
Identities = 14/35 (40%), Positives = 25/35 (71%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 756
V+T +G+KL+DEE D+++ A + +G++ E FV
Sbjct: 106 VLTTMGDKLSDEEFDKLV--AGQEDNGKIKIETFV 138
>Z70783-6|CAA94856.1| 195|Caenorhabditis elegans Hypothetical
protein ZK856.8 protein.
Length = 195
Score = 31.9 bits (69), Expect = 0.60
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 747
V N+ D+ D I EAD D DG+++++EF M
Sbjct: 143 VGANITSDQLDKIADRTIEEADADRDGKISFDEFCRAM 180
>Z81072-1|CAB03019.1| 311|Caenorhabditis elegans Hypothetical
protein F30A10.1 protein.
Length = 311
Score = 31.5 bits (68), Expect = 0.80
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 4/32 (12%)
Frame = -3
Query: 842 EKLTDEEVD----EMIREADIDGDGQVNYEEF 759
++L+D EV+ +I EAD+DGD +N+ EF
Sbjct: 262 DELSDVEVEFIIERIIEEADLDGDSSINFAEF 293
>U41625-4|ABC71830.1| 43|Caenorhabditis elegans Hypothetical
protein K03A1.4b protein.
Length = 43
Score = 30.7 bits (66), Expect = 1.4
Identities = 10/19 (52%), Positives = 17/19 (89%)
Frame = -3
Query: 821 VDEMIREADIDGDGQVNYE 765
V+++ EADIDGDG++++E
Sbjct: 21 VEQLFNEADIDGDGKISFE 39
>U41625-3|AAA83326.1| 264|Caenorhabditis elegans Hypothetical
protein K03A1.4a protein.
Length = 264
Score = 30.7 bits (66), Expect = 1.4
Identities = 10/19 (52%), Positives = 17/19 (89%)
Frame = -3
Query: 821 VDEMIREADIDGDGQVNYE 765
V+++ EADIDGDG++++E
Sbjct: 242 VEQLFNEADIDGDGKISFE 260
>U40427-2|AAA81468.2| 159|Caenorhabditis elegans Hypothetical
protein F43C9.2 protein.
Length = 159
Score = 30.7 bits (66), Expect = 1.4
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -3
Query: 821 VDEMIREADIDGDGQVNYEEFVTMM 747
+ +M + D++GDG++ + EFV MM
Sbjct: 133 ISDMFKATDLNGDGKITFFEFVKMM 157
>AF016435-6|AAB65882.1| 213|Caenorhabditis elegans Hypothetical
protein F59D6.7 protein.
Length = 213
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 747
V N+ D+ D+ + EAD D DG++++E+F M
Sbjct: 161 VGANITSDQLDKIADKTLEEADQDRDGKISFEDFCRAM 198
>AC024858-1|AAF60872.2| 196|Caenorhabditis elegans Hypothetical
protein Y71H2AL.1 protein.
Length = 196
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 818 DEMIREADIDGDGQVNYEEFVTMM 747
D +READ DGDG + ++EF M
Sbjct: 158 DRTMREADRDGDGFITFQEFCNAM 181
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 759
+M LGE T + E+I++ D D DG+++ EF
Sbjct: 569 MMEKLGEAQTHIALKELIKKVDEDQDGKISQREF 602
>Z81568-13|CAH10811.1| 153|Caenorhabditis elegans Hypothetical
protein K08E3.10 protein.
Length = 153
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 756
++ N GEK+T++EVD ++ ++ DG++N F+
Sbjct: 107 MLQNGGEKMTNQEVDNLLFGVEV-VDGRININNFL 140
>Z74036-5|CAA98489.3| 171|Caenorhabditis elegans Hypothetical
protein F55C10.1 protein.
Length = 171
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 759
V NL + + VD+ I D DGDG+++++EF
Sbjct: 120 VGNNLKDSQLQQIVDKTILFHDKDGDGKISFQEF 153
>AY190131-1|AAO33925.1| 171|Caenorhabditis elegans CNB-1 protein.
Length = 171
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 860 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 759
V NL + + VD+ I D DGDG+++++EF
Sbjct: 120 VGNNLKDSQLQQIVDKTILFHDKDGDGKISFQEF 153
>U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical
protein C37C3.6c protein.
Length = 1487
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -2
Query: 507 CKRSLTVAVQREDVRCASQCDGISVGLVSAPNLYLC 400
C RS VQ E +C+ C G SV +S NL C
Sbjct: 88 CSRSCGGGVQLEKRQCSGDCTGASVRYISC-NLNAC 122
>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical
protein C37C3.6a protein.
Length = 1558
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -2
Query: 507 CKRSLTVAVQREDVRCASQCDGISVGLVSAPNLYLC 400
C RS VQ E +C+ C G SV +S NL C
Sbjct: 88 CSRSCGGGVQLEKRQCSGDCTGASVRYISC-NLNAC 122
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical
protein C37C3.6b protein.
Length = 2167
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -2
Query: 507 CKRSLTVAVQREDVRCASQCDGISVGLVSAPNLYLC 400
C RS VQ E +C+ C G SV +S NL C
Sbjct: 88 CSRSCGGGVQLEKRQCSGDCTGASVRYISC-NLNAC 122
>Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical
protein ZK337.2 protein.
Length = 543
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 423 TRARHLYHHIATHTGRLPFVPLQLNFS 503
+R+ HL H+ THTG P+ N+S
Sbjct: 407 SRSDHLSTHLRTHTGEKPYACPMCNYS 433
>U88169-4|AAB42239.2| 81|Caenorhabditis elegans Hypothetical
protein T03F1.11 protein.
Length = 81
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = -3
Query: 815 EMIREADIDGDGQVNYEEF 759
++I+EAD DGD ++ ++EF
Sbjct: 54 QVIKEADKDGDSKITFDEF 72
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,225,771
Number of Sequences: 27780
Number of extensions: 314687
Number of successful extensions: 1023
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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