Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17g01
(816 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y11484-1|CAA72272.1| 640|Homo sapiens phosphoenolpyruvate carbo... 229 7e-60
X92720-1|CAA63380.1| 640|Homo sapiens phosphoenolpyruvate carbo... 229 7e-60
BC001454-1|AAH01454.1| 640|Homo sapiens phosphoenolpyruvate car... 229 7e-60
L12760-1|AAA02558.1| 622|Homo sapiens phosphoenolpyruvate carbo... 228 2e-59
BC023978-1|AAH23978.1| 622|Homo sapiens phosphoenolpyruvate car... 228 2e-59
AY794987-1|AAV50001.1| 622|Homo sapiens phosphoenolpyruvate car... 228 2e-59
AL035541-3|CAB55863.1| 622|Homo sapiens phosphoenolpyruvate car... 228 2e-59
L05144-1|AAA60084.1| 622|Homo sapiens phosphoenolpyruvate carbo... 226 6e-59
CR456913-1|CAG33194.1| 640|Homo sapiens PCK2 protein. 225 1e-58
AB066891-1|BAC01930.1| 125|Homo sapiens immunoglobulin heavy ch... 33 0.93
AF471474-1|AAQ05649.1| 124|Homo sapiens Ig heavy chain variable... 33 1.6
L23565-1|AAA52877.1| 169|Homo sapiens immunoglobulin heavy chai... 32 2.9
DQ065719-1|ABA00129.1| 119|Homo sapiens immunoglobulin epsilon ... 32 2.9
DQ065670-1|ABA00080.1| 119|Homo sapiens immunoglobulin epsilon ... 32 2.9
AY376118-1|AAQ88010.1| 123|Homo sapiens immunoglobulin E heavy ... 31 3.8
Z33899-1|CAA83949.1| 120|Homo sapiens Ig variable region (VDJ) ... 31 6.6
D83677-1|BAA12044.1| 124|Homo sapiens IgM protein. 31 6.6
AJ557050-1|CAD89849.1| 98|Homo sapiens immunoglobulin heavy ch... 31 6.6
AF103225-1|AAD30785.1| 121|Homo sapiens immunoglobulin heavy ch... 31 6.6
AB067103-1|BAC02141.1| 122|Homo sapiens immunoglobulin heavy ch... 31 6.6
U46751-1|AAC52070.1| 440|Homo sapiens phosphotyrosine independe... 30 8.7
U41806-1|AAA93299.1| 440|Homo sapiens p60 protein. 30 8.7
DQ926238-1|ABK81457.1| 119|Homo sapiens immunoglobulin heavy ch... 30 8.7
BC019111-1|AAH19111.1| 440|Homo sapiens sequestosome 1 protein. 30 8.7
BC017222-1|AAH17222.1| 440|Homo sapiens sequestosome 1 protein. 30 8.7
BC003139-1|AAH03139.1| 440|Homo sapiens sequestosome 1 protein. 30 8.7
BC001874-1|AAH01874.1| 356|Homo sapiens SQSTM1 protein protein. 30 8.7
BC000951-1|AAH00951.1| 368|Homo sapiens Similar to sequestosome... 30 8.7
AJ555928-1|CAD88649.1| 112|Homo sapiens immunoglobulin heavy ch... 30 8.7
AJ430748-1|CAD23518.1| 129|Homo sapiens immunoglobulin heavy ch... 30 8.7
AJ233714-1|CAC29402.1| 128|Homo sapiens immunoglobulin G heavy ... 30 8.7
AF471227-1|AAQ05402.1| 125|Homo sapiens Ig heavy chain variable... 30 8.7
AF304498-1|AAG25654.1| 107|Homo sapiens immunoglobulin heavy ch... 30 8.7
>Y11484-1|CAA72272.1| 640|Homo sapiens phosphoenolpyruvate
carboxykinase (GTP) protein.
Length = 640
Score = 229 bits (561), Expect = 7e-60
Identities = 99/161 (61%), Positives = 122/161 (75%), Gaps = 1/161 (0%)
Frame = -2
Query: 773 SMRSEATAAAEHSGKMVMHDPFAMRPFFGYNFGDYLKHWLSMP-QPGRNMPKIFHVNWFR 597
+MRSE+TAAAEH GK++MHDPFAMRPFFGYNFG YL+HWLSM + G +P+IFHVNWFR
Sbjct: 477 AMRSESTAAAEHKGKIIMHDPFAMRPFFGYNFGHYLEHWLSMEGRKGAQLPRIFHVNWFR 536
Query: 596 KDEQGKFLWPGFGENSRVLDWILRRCDGEPCHAETPLGYIPRAGALNTENLSAVDMNELF 417
+DE G FLWPGFGEN+RVLDWI RR +GE ETP+G +P+ GAL+ L A+D +LF
Sbjct: 537 RDEAGHFLWPGFGENARVLDWICRRLEGEDSARETPIGLVPKEGALDLSGLRAIDTTQLF 596
Query: 416 SIPKDFWLQESDAIEKYFKEEVGEDLPNEMWDELNKLRKNI 294
S+PKDFW QE I Y E+V +DLP E+ EL L + +
Sbjct: 597 SLPKDFWEQEVRDIRSYLTEQVNQDLPKEVLAELEALERRV 637
>X92720-1|CAA63380.1| 640|Homo sapiens phosphoenolpyruvate
carboxykinase (GTP) protein.
Length = 640
Score = 229 bits (561), Expect = 7e-60
Identities = 99/161 (61%), Positives = 122/161 (75%), Gaps = 1/161 (0%)
Frame = -2
Query: 773 SMRSEATAAAEHSGKMVMHDPFAMRPFFGYNFGDYLKHWLSMP-QPGRNMPKIFHVNWFR 597
+MRSE+TAAAEH GK++MHDPFAMRPFFGYNFG YL+HWLSM + G +P+IFHVNWFR
Sbjct: 477 AMRSESTAAAEHKGKIIMHDPFAMRPFFGYNFGHYLEHWLSMEGRKGAQLPRIFHVNWFR 536
Query: 596 KDEQGKFLWPGFGENSRVLDWILRRCDGEPCHAETPLGYIPRAGALNTENLSAVDMNELF 417
+DE G FLWPGFGEN+RVLDWI RR +GE ETP+G +P+ GAL+ L A+D +LF
Sbjct: 537 RDEAGHFLWPGFGENARVLDWICRRLEGEDSARETPIGLVPKEGALDLSGLRAIDTTQLF 596
Query: 416 SIPKDFWLQESDAIEKYFKEEVGEDLPNEMWDELNKLRKNI 294
S+PKDFW QE I Y E+V +DLP E+ EL L + +
Sbjct: 597 SLPKDFWEQEVRDIRSYLTEQVNQDLPKEVLAELEALERRV 637
>BC001454-1|AAH01454.1| 640|Homo sapiens phosphoenolpyruvate
carboxykinase 2 (mitochondrial) protein.
Length = 640
Score = 229 bits (561), Expect = 7e-60
Identities = 99/161 (61%), Positives = 122/161 (75%), Gaps = 1/161 (0%)
Frame = -2
Query: 773 SMRSEATAAAEHSGKMVMHDPFAMRPFFGYNFGDYLKHWLSMP-QPGRNMPKIFHVNWFR 597
+MRSE+TAAAEH GK++MHDPFAMRPFFGYNFG YL+HWLSM + G +P+IFHVNWFR
Sbjct: 477 AMRSESTAAAEHKGKIIMHDPFAMRPFFGYNFGHYLEHWLSMEGRKGAQLPRIFHVNWFR 536
Query: 596 KDEQGKFLWPGFGENSRVLDWILRRCDGEPCHAETPLGYIPRAGALNTENLSAVDMNELF 417
+DE G FLWPGFGEN+RVLDWI RR +GE ETP+G +P+ GAL+ L A+D +LF
Sbjct: 537 RDEAGHFLWPGFGENARVLDWICRRLEGEDSARETPIGLVPKEGALDLSGLRAIDTTQLF 596
Query: 416 SIPKDFWLQESDAIEKYFKEEVGEDLPNEMWDELNKLRKNI 294
S+PKDFW QE I Y E+V +DLP E+ EL L + +
Sbjct: 597 SLPKDFWEQEVRDIRSYLTEQVNQDLPKEVLAELEALERRV 637
>L12760-1|AAA02558.1| 622|Homo sapiens phosphoenolpyruvate
carboxykinase protein.
Length = 622
Score = 228 bits (557), Expect = 2e-59
Identities = 101/161 (62%), Positives = 125/161 (77%), Gaps = 1/161 (0%)
Frame = -2
Query: 773 SMRSEATAAAEHSGKMVMHDPFAMRPFFGYNFGDYLKHWLSMPQ-PGRNMPKIFHVNWFR 597
+MRSEATAAAEH GK++MHDPFAMRPFFGYNFG YL HWLSM Q P +PKIFHVNWFR
Sbjct: 459 AMRSEATAAAEHKGKIIMHDPFAMRPFFGYNFGKYLAHWLSMAQHPAAKLPKIFHVNWFR 518
Query: 596 KDEQGKFLWPGFGENSRVLDWILRRCDGEPCHAETPLGYIPRAGALNTENLSAVDMNELF 417
KD++GKFLWPGFGENSRVL+W+ R DG+ TP+GYIP+ ALN + L ++M ELF
Sbjct: 519 KDKEGKFLWPGFGENSRVLEWMFNRIDGKASTKLTPIGYIPKEDALNLKGLGHINMMELF 578
Query: 416 SIPKDFWLQESDAIEKYFKEEVGEDLPNEMWDELNKLRKNI 294
SI K+FW +E + IEKY +++V DLP E+ E+ L++ I
Sbjct: 579 SISKEFWEKEVEDIEKYLEDQVNADLPCEIEREILALKQRI 619
>BC023978-1|AAH23978.1| 622|Homo sapiens phosphoenolpyruvate
carboxykinase 1 (soluble) protein.
Length = 622
Score = 228 bits (557), Expect = 2e-59
Identities = 101/161 (62%), Positives = 125/161 (77%), Gaps = 1/161 (0%)
Frame = -2
Query: 773 SMRSEATAAAEHSGKMVMHDPFAMRPFFGYNFGDYLKHWLSMPQ-PGRNMPKIFHVNWFR 597
+MRSEATAAAEH GK++MHDPFAMRPFFGYNFG YL HWLSM Q P +PKIFHVNWFR
Sbjct: 459 AMRSEATAAAEHKGKIIMHDPFAMRPFFGYNFGKYLAHWLSMAQHPAAKLPKIFHVNWFR 518
Query: 596 KDEQGKFLWPGFGENSRVLDWILRRCDGEPCHAETPLGYIPRAGALNTENLSAVDMNELF 417
KD++GKFLWPGFGENSRVL+W+ R DG+ TP+GYIP+ ALN + L ++M ELF
Sbjct: 519 KDKEGKFLWPGFGENSRVLEWMFNRIDGKASTKLTPIGYIPKEDALNLKGLGHINMMELF 578
Query: 416 SIPKDFWLQESDAIEKYFKEEVGEDLPNEMWDELNKLRKNI 294
SI K+FW +E + IEKY +++V DLP E+ E+ L++ I
Sbjct: 579 SISKEFWEKEVEDIEKYLEDQVNADLPCEIEREILALKQRI 619
>AY794987-1|AAV50001.1| 622|Homo sapiens phosphoenolpyruvate
carboxykinase 1 (soluble) protein.
Length = 622
Score = 228 bits (557), Expect = 2e-59
Identities = 101/161 (62%), Positives = 125/161 (77%), Gaps = 1/161 (0%)
Frame = -2
Query: 773 SMRSEATAAAEHSGKMVMHDPFAMRPFFGYNFGDYLKHWLSMPQ-PGRNMPKIFHVNWFR 597
+MRSEATAAAEH GK++MHDPFAMRPFFGYNFG YL HWLSM Q P +PKIFHVNWFR
Sbjct: 459 AMRSEATAAAEHKGKIIMHDPFAMRPFFGYNFGKYLAHWLSMAQHPAAKLPKIFHVNWFR 518
Query: 596 KDEQGKFLWPGFGENSRVLDWILRRCDGEPCHAETPLGYIPRAGALNTENLSAVDMNELF 417
KD++GKFLWPGFGENSRVL+W+ R DG+ TP+GYIP+ ALN + L ++M ELF
Sbjct: 519 KDKEGKFLWPGFGENSRVLEWMFNRIDGKASTKLTPIGYIPKEDALNLKGLGHINMMELF 578
Query: 416 SIPKDFWLQESDAIEKYFKEEVGEDLPNEMWDELNKLRKNI 294
SI K+FW +E + IEKY +++V DLP E+ E+ L++ I
Sbjct: 579 SISKEFWEKEVEDIEKYLEDQVNADLPCEIEREILALKQRI 619
>AL035541-3|CAB55863.1| 622|Homo sapiens phosphoenolpyruvate
carboxykinase 1 (soluble) protein.
Length = 622
Score = 228 bits (557), Expect = 2e-59
Identities = 101/161 (62%), Positives = 125/161 (77%), Gaps = 1/161 (0%)
Frame = -2
Query: 773 SMRSEATAAAEHSGKMVMHDPFAMRPFFGYNFGDYLKHWLSMPQ-PGRNMPKIFHVNWFR 597
+MRSEATAAAEH GK++MHDPFAMRPFFGYNFG YL HWLSM Q P +PKIFHVNWFR
Sbjct: 459 AMRSEATAAAEHKGKIIMHDPFAMRPFFGYNFGKYLAHWLSMAQHPAAKLPKIFHVNWFR 518
Query: 596 KDEQGKFLWPGFGENSRVLDWILRRCDGEPCHAETPLGYIPRAGALNTENLSAVDMNELF 417
KD++GKFLWPGFGENSRVL+W+ R DG+ TP+GYIP+ ALN + L ++M ELF
Sbjct: 519 KDKEGKFLWPGFGENSRVLEWMFNRIDGKASTKLTPIGYIPKEDALNLKGLGHINMMELF 578
Query: 416 SIPKDFWLQESDAIEKYFKEEVGEDLPNEMWDELNKLRKNI 294
SI K+FW +E + IEKY +++V DLP E+ E+ L++ I
Sbjct: 579 SISKEFWEKEVEDIEKYLEDQVNADLPCEIEREILALKQRI 619
>L05144-1|AAA60084.1| 622|Homo sapiens phosphoenolpyruvate
carboxykinase protein.
Length = 622
Score = 226 bits (553), Expect = 6e-59
Identities = 101/161 (62%), Positives = 124/161 (77%), Gaps = 1/161 (0%)
Frame = -2
Query: 773 SMRSEATAAAEHSGKMVMHDPFAMRPFFGYNFGDYLKHWLSMPQ-PGRNMPKIFHVNWFR 597
+MRSEATAAAEH GK++MHDPFAMRPFFGYNFG YL HWLSM Q P +PKIFHVNWFR
Sbjct: 459 AMRSEATAAAEHKGKIIMHDPFAMRPFFGYNFGKYLAHWLSMAQHPAAKLPKIFHVNWFR 518
Query: 596 KDEQGKFLWPGFGENSRVLDWILRRCDGEPCHAETPLGYIPRAGALNTENLSAVDMNELF 417
KD++GKFLWPGFGENSRVL+W+ R DG+ TP+GYIP+ ALN + L ++M ELF
Sbjct: 519 KDKEGKFLWPGFGENSRVLEWMFNRIDGKASTNVTPIGYIPKEDALNLKGLGHINMMELF 578
Query: 416 SIPKDFWLQESDAIEKYFKEEVGEDLPNEMWDELNKLRKNI 294
SI K+FW +E + IEKY ++V DLP E+ E+ L++ I
Sbjct: 579 SISKEFWDKEVEDIEKYLVDQVNADLPCEIEREILALKQRI 619
>CR456913-1|CAG33194.1| 640|Homo sapiens PCK2 protein.
Length = 640
Score = 225 bits (551), Expect = 1e-58
Identities = 98/161 (60%), Positives = 121/161 (75%), Gaps = 1/161 (0%)
Frame = -2
Query: 773 SMRSEATAAAEHSGKMVMHDPFAMRPFFGYNFGDYLKHWLSMP-QPGRNMPKIFHVNWFR 597
+MRSE+TAAAEH GK++MHDPFAMRPFFGYNFG YL+HWLSM + G +P+IFHVNWFR
Sbjct: 477 AMRSESTAAAEHKGKIIMHDPFAMRPFFGYNFGHYLEHWLSMEGRKGAQLPRIFHVNWFR 536
Query: 596 KDEQGKFLWPGFGENSRVLDWILRRCDGEPCHAETPLGYIPRAGALNTENLSAVDMNELF 417
+DE G FLW GFGEN+RVLDWI RR +GE ETP+G +P+ GAL+ L A+D +LF
Sbjct: 537 RDEAGHFLWLGFGENARVLDWICRRLEGEDSARETPIGLVPKEGALDLSGLRAIDTTQLF 596
Query: 416 SIPKDFWLQESDAIEKYFKEEVGEDLPNEMWDELNKLRKNI 294
S+PKDFW QE I Y E+V +DLP E+ EL L + +
Sbjct: 597 SLPKDFWEQEVRDIRSYLTEQVNQDLPKEVLAELEALERRV 637
>AB066891-1|BAC01930.1| 125|Homo sapiens immunoglobulin heavy chain
VHDJ region protein.
Length = 125
Score = 33.5 bits (73), Expect = 0.93
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -2
Query: 689 GYNFGDYLKHWLSMPQPGRNMPKIFHVNW 603
G+ FGD++ HW+ PG+ + + ++NW
Sbjct: 26 GFTFGDFVMHWVRQ-TPGKGLEWVAYINW 53
>AF471474-1|AAQ05649.1| 124|Homo sapiens Ig heavy chain variable
region, VH3 family protein.
Length = 124
Score = 32.7 bits (71), Expect = 1.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 689 GYNFGDYLKHWLSMPQPGRNMPKIFHVNW 603
G+ F DY HW+ PG+ + + H+NW
Sbjct: 26 GFTFDDYTLHWI-RHVPGKGLEWVSHINW 53
>L23565-1|AAA52877.1| 169|Homo sapiens immunoglobulin heavy chain
protein.
Length = 169
Score = 31.9 bits (69), Expect = 2.9
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -2
Query: 689 GYNFGDYLKHWLSMPQPGRNMPKIFHVNW 603
G+ FG+Y HW+ P PG+ + + ++W
Sbjct: 37 GFTFGNYAMHWVRQP-PGKGLEWVSGISW 64
>DQ065719-1|ABA00129.1| 119|Homo sapiens immunoglobulin epsilon
heavy chain variable region protein.
Length = 119
Score = 31.9 bits (69), Expect = 2.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 689 GYNFGDYLKHWLSMPQPGRNMPKIFHVNW 603
G+ F DY HW+ PG+ + + H++W
Sbjct: 26 GFTFDDYTMHWVRQ-APGKGLEWVSHISW 53
>DQ065670-1|ABA00080.1| 119|Homo sapiens immunoglobulin epsilon
heavy chain variable region protein.
Length = 119
Score = 31.9 bits (69), Expect = 2.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 689 GYNFGDYLKHWLSMPQPGRNMPKIFHVNW 603
G+ F DY HW+ PG+ + + H++W
Sbjct: 26 GFTFDDYTMHWVRQ-APGKGLEWVSHISW 53
>AY376118-1|AAQ88010.1| 123|Homo sapiens immunoglobulin E heavy
chain variable region protein.
Length = 123
Score = 31.5 bits (68), Expect = 3.8
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = -2
Query: 743 EHSGKMVMHDPFAMR---PFFGYNFGDYLKHWLSMPQPGRNMPKIFHVNW 603
E SG +V+ ++R G+ F DY HW+ P PG+ + + ++W
Sbjct: 6 EQSGGVVIQPGGSLRLSCAVSGFTFDDYAMHWVRQP-PGKGLEWVSLISW 54
>Z33899-1|CAA83949.1| 120|Homo sapiens Ig variable region (VDJ)
protein.
Length = 120
Score = 30.7 bits (66), Expect = 6.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 689 GYNFGDYLKHWLSMPQPGRNMPKIFHVNW 603
G+ FGDY HW+ PG+ + + ++W
Sbjct: 26 GFTFGDYAMHWVRQ-APGKGLQWVSGISW 53
>D83677-1|BAA12044.1| 124|Homo sapiens IgM protein.
Length = 124
Score = 30.7 bits (66), Expect = 6.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 689 GYNFGDYLKHWLSMPQPGRNMPKIFHVNW 603
G+ FGDY HW+ PG+ + + ++W
Sbjct: 26 GFTFGDYAMHWVRQ-APGKGLEWVSGISW 53
>AJ557050-1|CAD89849.1| 98|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 98
Score = 30.7 bits (66), Expect = 6.6
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 689 GYNFGDYLKHWLSMPQPGRNMPKIFHVNW 603
G+ F DY HW+ PG+ + + +NW
Sbjct: 3 GFTFNDYAMHWVRQ-APGKGLDWVASINW 30
>AF103225-1|AAD30785.1| 121|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 121
Score = 30.7 bits (66), Expect = 6.6
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Frame = -2
Query: 689 GYNFGDYLKHWLSMPQPGRNMPKIFHVNW------FRKDEQGKF 576
G+NF DY HW+ +PG+ + + + W + K +G+F
Sbjct: 19 GFNFDDYTFHWVRQ-RPGKGLDWVAFIGWDGVTKSYSKSAEGRF 61
>AB067103-1|BAC02141.1| 122|Homo sapiens immunoglobulin heavy chain
VHDJ region protein.
Length = 122
Score = 30.7 bits (66), Expect = 6.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 689 GYNFGDYLKHWLSMPQPGRNMPKIFHVNW 603
G+ FGDY HW+ PG+ + + ++W
Sbjct: 26 GFTFGDYAMHWVRQ-APGKGLEWVSGISW 53
>U46751-1|AAC52070.1| 440|Homo sapiens phosphotyrosine independent
ligand for the Lck SH2 domain p62 protein.
Length = 440
Score = 30.3 bits (65), Expect = 8.7
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 656 LSMPQPGRNMPKIF-HVNWFRKDEQGKFLWPGF 561
L+ P P ++ + F H W RK + G F WPG+
Sbjct: 166 LAFPSPFGHLSEGFSHSRWLRKVKHGHFGWPGW 198
>U41806-1|AAA93299.1| 440|Homo sapiens p60 protein.
Length = 440
Score = 30.3 bits (65), Expect = 8.7
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 656 LSMPQPGRNMPKIF-HVNWFRKDEQGKFLWPGF 561
L+ P P ++ + F H W RK + G F WPG+
Sbjct: 166 LAFPSPFGHLSEGFSHSRWLRKVKHGHFGWPGW 198
>DQ926238-1|ABK81457.1| 119|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 119
Score = 30.3 bits (65), Expect = 8.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 689 GYNFGDYLKHWLSMPQPGRNMPKIFHVNW 603
G+ FGDY HW+ PG+ + + ++W
Sbjct: 26 GFTFGDYAMHWVRQ-VPGKGLEWVSGISW 53
>BC019111-1|AAH19111.1| 440|Homo sapiens sequestosome 1 protein.
Length = 440
Score = 30.3 bits (65), Expect = 8.7
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 656 LSMPQPGRNMPKIF-HVNWFRKDEQGKFLWPGF 561
L+ P P ++ + F H W RK + G F WPG+
Sbjct: 166 LAFPSPFGHLSEGFSHSRWLRKVKHGHFGWPGW 198
>BC017222-1|AAH17222.1| 440|Homo sapiens sequestosome 1 protein.
Length = 440
Score = 30.3 bits (65), Expect = 8.7
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 656 LSMPQPGRNMPKIF-HVNWFRKDEQGKFLWPGF 561
L+ P P ++ + F H W RK + G F WPG+
Sbjct: 166 LAFPSPFGHLSEGFSHSRWLRKVKHGHFGWPGW 198
>BC003139-1|AAH03139.1| 440|Homo sapiens sequestosome 1 protein.
Length = 440
Score = 30.3 bits (65), Expect = 8.7
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 656 LSMPQPGRNMPKIF-HVNWFRKDEQGKFLWPGF 561
L+ P P ++ + F H W RK + G F WPG+
Sbjct: 166 LAFPSPFGHLSEGFSHSRWLRKVKHGHFGWPGW 198
>BC001874-1|AAH01874.1| 356|Homo sapiens SQSTM1 protein protein.
Length = 356
Score = 30.3 bits (65), Expect = 8.7
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 656 LSMPQPGRNMPKIF-HVNWFRKDEQGKFLWPGF 561
L+ P P ++ + F H W RK + G F WPG+
Sbjct: 82 LAFPSPFGHLSEGFSHSRWLRKVKHGHFGWPGW 114
>BC000951-1|AAH00951.1| 368|Homo sapiens Similar to sequestosome 1
protein.
Length = 368
Score = 30.3 bits (65), Expect = 8.7
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 656 LSMPQPGRNMPKIF-HVNWFRKDEQGKFLWPGF 561
L+ P P ++ + F H W RK + G F WPG+
Sbjct: 94 LAFPSPFGHLSEGFSHSRWLRKVKHGHFGWPGW 126
>AJ555928-1|CAD88649.1| 112|Homo sapiens immunoglobulin heavy chain
protein.
Length = 112
Score = 30.3 bits (65), Expect = 8.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 689 GYNFGDYLKHWLSMPQPGRNMPKIFHVNW 603
G+ F DY HW+ P PG+ + + ++W
Sbjct: 26 GFTFDDYAIHWIRQP-PGKGLEWVSVISW 53
>AJ430748-1|CAD23518.1| 129|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 129
Score = 30.3 bits (65), Expect = 8.7
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 689 GYNFGDYLKHWLSMPQPGRNMPKIFHVNW 603
G+ F DY HW+ PG+ + + +NW
Sbjct: 30 GFTFDDYAMHWVRQ-SPGKGLEWVAGINW 57
>AJ233714-1|CAC29402.1| 128|Homo sapiens immunoglobulin G heavy
chain variable region protein.
Length = 128
Score = 30.3 bits (65), Expect = 8.7
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 689 GYNFGDYLKHWLSMPQPGRNMPKIFHVNW 603
G+ F DY HW+ PG+ + + +NW
Sbjct: 26 GFTFDDYAMHWVRQ-APGKGLEWVSSINW 53
>AF471227-1|AAQ05402.1| 125|Homo sapiens Ig heavy chain variable
region, VH3 family protein.
Length = 125
Score = 30.3 bits (65), Expect = 8.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 689 GYNFGDYLKHWLSMPQPGRNMPKIFHVNW 603
G++F DY HW+ PG+ + + +NW
Sbjct: 26 GFSFDDYAMHWVRQ-APGKGLEWVSGINW 53
>AF304498-1|AAG25654.1| 107|Homo sapiens immunoglobulin heavy chain
VDJ region protein.
Length = 107
Score = 30.3 bits (65), Expect = 8.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 689 GYNFGDYLKHWLSMPQPGRNMPKIFHVNW 603
G+NF DY HW+ PG+ + + ++W
Sbjct: 11 GFNFDDYAMHWVRQ-SPGQGLEWVSGISW 38
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,414,676
Number of Sequences: 237096
Number of extensions: 2661848
Number of successful extensions: 8351
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 7993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8336
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -