Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt17f09
         (489 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015225-1|AAT94454.1| 1129|Drosophila melanogaster RE23320p pro...    29   3.4  
BT011079-1|AAR82745.1| 1100|Drosophila melanogaster SD01102p pro...    29   3.4  
AE014296-98|AAF47384.1|  941|Drosophila melanogaster CG1233-PA, ...    29   3.4  
AE014296-97|AAG22219.2| 1129|Drosophila melanogaster CG1233-PB, ...    29   3.4  
AY089413-1|AAL90151.1|   61|Drosophila melanogaster AT23551p pro...    28   7.9  
AE014134-2896|AAN11177.1|   61|Drosophila melanogaster CG31740-P...    28   7.9  

>BT015225-1|AAT94454.1| 1129|Drosophila melanogaster RE23320p
           protein.
          Length = 1129

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 86  FDTQTYSKIYNRYEKIFLEKTNKKCNQ 6
           F T  YS++ N + KI  E+ N KC Q
Sbjct: 866 FKTPIYSRLVNTHAKIHSEERNYKCEQ 892


>BT011079-1|AAR82745.1| 1100|Drosophila melanogaster SD01102p protein.
          Length = 1100

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 86   FDTQTYSKIYNRYEKIFLEKTNKKCNQ 6
            F T  YS++ N + KI  E+ N KC Q
Sbjct: 928  FKTPIYSRLVNTHAKIHSEERNYKCEQ 954


>AE014296-98|AAF47384.1|  941|Drosophila melanogaster CG1233-PA,
           isoform A protein.
          Length = 941

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 86  FDTQTYSKIYNRYEKIFLEKTNKKCNQ 6
           F T  YS++ N + KI  E+ N KC Q
Sbjct: 678 FKTPIYSRLVNTHAKIHSEERNYKCEQ 704


>AE014296-97|AAG22219.2| 1129|Drosophila melanogaster CG1233-PB,
           isoform B protein.
          Length = 1129

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 86  FDTQTYSKIYNRYEKIFLEKTNKKCNQ 6
           F T  YS++ N + KI  E+ N KC Q
Sbjct: 866 FKTPIYSRLVNTHAKIHSEERNYKCEQ 892


>AY089413-1|AAL90151.1|   61|Drosophila melanogaster AT23551p
           protein.
          Length = 61

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 6/45 (13%)
 Frame = -3

Query: 214 VGGIQRACLDPTL---PYCNLGECS--ATPAEG-CEPASGASVAP 98
           VG     CL P +   PYC  G C    +P  G C P  G S  P
Sbjct: 14  VGPCPPGCLAPLMGGTPYCGCGPCGGCCSPCCGPCGPCGGCSSCP 58


>AE014134-2896|AAN11177.1|   61|Drosophila melanogaster CG31740-PA
           protein.
          Length = 61

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 6/45 (13%)
 Frame = -3

Query: 214 VGGIQRACLDPTL---PYCNLGECS--ATPAEG-CEPASGASVAP 98
           VG     CL P +   PYC  G C    +P  G C P  G S  P
Sbjct: 14  VGPCPPGCLAPLMGGTPYCGCGPCGGCCSPCCGPCGPCGGCSSCP 58


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,798,389
Number of Sequences: 53049
Number of extensions: 471137
Number of successful extensions: 1422
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1422
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1726192251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)