Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17f01
(723 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 175 4e-45
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 71 1e-13
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 60 3e-10
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 58 1e-09
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 58 1e-09
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 53 4e-08
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 50 3e-07
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 42 7e-05
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 41 2e-04
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 41 2e-04
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 41 2e-04
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 37 0.003
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 36 0.006
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 36 0.008
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 36 0.008
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 35 0.010
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 31 0.13
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 29 0.51
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 28 1.2
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 28 1.6
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 27 2.1
SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomy... 26 6.3
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 6.3
SPAC2F3.01 ||SPAC323.09|mannosyltransferase complex subunit |Sch... 26 6.3
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 175 bits (427), Expect = 4e-45
Identities = 94/211 (44%), Positives = 131/211 (62%), Gaps = 3/211 (1%)
Frame = -1
Query: 723 FKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXATSLCFVYPLDFARTRLAADV--GKG 550
FKDK+K++F G ++ + ++F A SL FVY LD+ARTRLA D K
Sbjct: 111 FKDKFKKMF-GYKKERDGYAKWFAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKK 169
Query: 549 DGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARG-MLPDPKN 373
G+R+F+GL + K ++SDGL GLYRGFG SV GI++YR YFG YDT + +L P
Sbjct: 170 GGERQFNGLVDVYRKTYRSDGLRGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVLVGPLE 229
Query: 372 TPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGT 193
+ S+ + VTT +G+ SYP DT+RRRMMM SG A + Y ++ C I EG
Sbjct: 230 GNFLASFLLGWAVTTGSGVASYPLDTIRRRMMMTSGEA---VKYSSSFECGRQILAKEGA 286
Query: 192 SAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 100
+FFKGA +N+LRG GA VL +YD+++ ++
Sbjct: 287 RSFFKGAGANILRGVAGAGVLSIYDQVQLLM 317
Score = 33.5 bits (73), Expect = 0.031
Identities = 27/127 (21%), Positives = 48/127 (37%), Gaps = 7/127 (5%)
Frame = -1
Query: 534 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVIS 355
+ G+G C + +G+I L+RG +V +A F F D + M K
Sbjct: 71 YKGIGECFKRTAAEEGVISLWRGNTANVLRYFPTQALNFAFKDKFKKMFGYKKERDGYAK 130
Query: 354 WAIAQTVT-TVAGIIS----YPFDTVRRRMMMQSGRAK--SDILYKNTIHCWATIAKTEG 196
W + AG S Y D R R+ + AK + + + + +++G
Sbjct: 131 WFAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDG 190
Query: 195 TSAFFKG 175
++G
Sbjct: 191 LRGLYRG 197
Score = 27.5 bits (58), Expect = 2.1
Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = -1
Query: 390 LPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDIL---YKNTIHCW 220
+ + KN+ + + V+ + P + V+ + Q ++ L YK C+
Sbjct: 19 ITETKNSTFFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECF 78
Query: 219 ATIAKTEGTSAFFKGAFSNVLR 154
A EG + ++G +NVLR
Sbjct: 79 KRTAAEEGVISLWRGNTANVLR 100
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 71.3 bits (167), Expect = 1e-13
Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 3/172 (1%)
Frame = -1
Query: 618 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGII 439
T V P + + RL DV +++G +C +KI K + ++ LY GF ++ +
Sbjct: 117 TETFVVVPFELMKIRLQ-DVKNAS---KYNGTVDCFTKIVKQERILALYNGFEATMWRHV 172
Query: 438 IYRASYFGFYDTARGML-PDPKNTPIVISWAIAQTVTTVAG-IISYPFDTVRRRMMMQSG 265
++ A YFG R L P + + IA T+ + G +S PFD ++ R+
Sbjct: 173 VWNAGYFGVIQKIRNSLTPASSRIGEIRNNLIAGTIGGIFGTFLSTPFDVIKSRIQTVPR 232
Query: 264 RAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR-GTGGAFVLVLYDEI 112
A Y T+A+ EG +A +KG VLR G GG +LV+++ +
Sbjct: 233 IAGQVPKYNWAYPALVTVAREEGFTALYKGFVPKVLRLGPGGGILLVVFNSV 284
Score = 50.0 bits (114), Expect = 3e-07
Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 3/146 (2%)
Frame = -1
Query: 603 VYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRAS 424
+YPLD +TR+ VGK D ++G +C+ KI K++G LYRG + RA
Sbjct: 26 LYPLDVVKTRMQLSVGKSD----YNGTFDCLKKIVKNEGPHRLYRGILPPILMEAPKRAL 81
Query: 423 YFGFYDTARGM---LPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKS 253
F DT + + K++ +S + PF+ ++ R+ +K
Sbjct: 82 KFASNDTYSKLWRKVFKRKDSSPALSILTGSCAGFTETFVVVPFELMKIRLQDVKNASK- 140
Query: 252 DILYKNTIHCWATIAKTEGTSAFFKG 175
Y T+ C+ I K E A + G
Sbjct: 141 ---YNGTVDCFTKIVKQERILALYNG 163
Score = 38.7 bits (86), Expect = 8e-04
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = -1
Query: 375 NTPIVISWAIAQTVTTVAGIIS-YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTE 199
N P +++A A V ++ +++ YP D V+ RM + G KSD Y T C I K E
Sbjct: 5 NIPFPVTFA-AGAVAGISEVLTLYPLDVVKTRMQLSVG--KSD--YNGTFDCLKKIVKNE 59
Query: 198 GTSAFFKGAFSNVL 157
G ++G +L
Sbjct: 60 GPHRLYRGILPPIL 73
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 60.1 bits (139), Expect = 3e-10
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 1/142 (0%)
Frame = -1
Query: 603 VYPLDFARTRLAADVGKGDGQREFSG-LGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRA 427
+YP+D +TR+ G R SG + N + KI ++G+ L+RG + G A
Sbjct: 37 MYPVDAIKTRMQMLNGVS---RSVSGNIVNSVIKISSTEGVYSLWRGISSVIMGAGPSHA 93
Query: 426 SYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDI 247
YF + + + + P+ + A A +T ++ PFD +++RM + S +
Sbjct: 94 IYFSVLEFFKSKINASPDRPLASALAGACAIT-ISDAFMTPFDVIKQRMQLPSRK----- 147
Query: 246 LYKNTIHCWATIAKTEGTSAFF 181
YK+ +HC T+ + EG AF+
Sbjct: 148 -YKSALHCATTVFRNEGLGAFY 168
Score = 32.7 bits (71), Expect = 0.055
Identities = 27/126 (21%), Positives = 54/126 (42%), Gaps = 4/126 (3%)
Frame = -1
Query: 540 REFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGML-PDPKNTPI 364
R++ +C + +F+++GL Y + + I + A YDT L P+ P
Sbjct: 146 RKYKSALHCATTVFRNEGLGAFYISYPTCIAMSIPFTAIQVATYDTCMSFLNPNAVYDPT 205
Query: 363 --VISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDI-LYKNTIHCWATIAKTEGT 193
+IS ++ +A ++ P D V+ + + + ++ K ++ I G
Sbjct: 206 SHIISGGLS---GAIASSLTTPLDVVKTLLQTRGSSSIPEVRKCKGSLDVVRFIYNYGGI 262
Query: 192 SAFFKG 175
+FFKG
Sbjct: 263 PSFFKG 268
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 58.4 bits (135), Expect = 1e-09
Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 11/177 (6%)
Frame = -1
Query: 597 PLDFARTR--LAADVGKGD-GQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRA 427
P + +TR L + K D +R + +G S I + +G+ GL RG G + I
Sbjct: 43 PFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGIRGLQRGLGTAYVYQICLNG 102
Query: 426 SYFGFYDTAR-----GMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGR 262
GFY+ R L DPK + I+ A + PF V+ RM S +
Sbjct: 103 CRLGFYEPIRRTLNTWFLDDPKGNKLAINVASGAGSGLCGALFGSPFFLVKTRMQSYSPK 162
Query: 261 --AKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFV-LVLYDEIKKVL 100
YK+ + ++ I K G F GA + +LR G+ V L +Y+ K+++
Sbjct: 163 FPVGQQYGYKHIFNAFSRIIKENGVKGLFVGADAAILRTVSGSSVQLPIYNWAKRMI 219
Score = 39.1 bits (87), Expect = 6e-04
Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 2/132 (1%)
Frame = -1
Query: 543 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPI 364
Q + + N S+I K +G+ GL+ G ++ + + Y+ A+ M+
Sbjct: 168 QYGYKHIFNAFSRIIKENGVKGLFVGADAAILRTVSGSSVQLPIYNWAKRMIEHYNLLEE 227
Query: 363 VISWAIAQTVTTVAGIISYP--FDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTS 190
+ + + + G+ FDTV RM Q K+ LYKN I C ++EG
Sbjct: 228 GMIKHLTASAVSGFGVCCTMQIFDTVMTRMYNQ----KNKELYKNPIDCILKTIRSEGFF 283
Query: 189 AFFKGAFSNVLR 154
A +KG +++ R
Sbjct: 284 ALYKGFGAHLAR 295
Score = 29.1 bits (62), Expect = 0.67
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 519 NCISKIFKSDGLIGLYRGFGVSVQGI 442
+CI K +S+G LY+GFG + I
Sbjct: 271 DCILKTIRSEGFFALYKGFGAHLARI 296
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 58.0 bits (134), Expect = 1e-09
Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 13/182 (7%)
Frame = -1
Query: 606 FVYPLDFARTRL-AADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYR 430
F+YP+D + R+ +D+ +G + L N +++KS G+ G YRG V + G+ Y
Sbjct: 245 FIYPVDTLKFRIQCSDLSRGQHGKSII-LSNA-KELYKSVGIRGYYRGVLVGILGMFPYS 302
Query: 429 ASYFGFYD----TARGMLP-----DPKNT--PIVISWAIAQTVTTVAGIISYPFDTVRRR 283
A+ G ++ T G+L DP++ P + A + I +P + +R R
Sbjct: 303 ATDLGTFEGLKRTWIGILASRDNVDPQDVKLPNGLVMAFGALSGSTGATIVFPLNVIRTR 362
Query: 282 MMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR-GTGGAFVLVLYDEIKK 106
+ Q G + Y I C+ K EG +KG N+L+ A ++Y+ KK
Sbjct: 363 LQTQ-GTSAHPATYDGFIDCFYKTTKNEGFRGLYKGLSPNLLKVAPSVAISYLVYENCKK 421
Query: 105 VL 100
L
Sbjct: 422 WL 423
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 53.2 bits (122), Expect = 4e-08
Identities = 43/140 (30%), Positives = 64/140 (45%), Gaps = 5/140 (3%)
Frame = -1
Query: 504 IFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTV 325
I +G+ GLYRG +V F Y++ + L +S V +V
Sbjct: 153 IVHENGIRGLYRGLAATVARQAANSGVRFTAYNSIKQSLQSRLPPDEKLSTVTTFLVGSV 212
Query: 324 AGIISY----PFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVL 157
AGII+ P DTV+ RM QS A + YKN+IHC I +G F+ GA +
Sbjct: 213 AGIITVYCTQPIDTVKSRM--QSLSASKE--YKNSIHCAYKILTQDGLLRFWSGATPRLA 268
Query: 156 R-GTGGAFVLVLYDEIKKVL 100
R G V +Y+++ ++L
Sbjct: 269 RLILSGGIVFTVYEKVMEIL 288
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 50.4 bits (115), Expect = 3e-07
Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 7/174 (4%)
Frame = -1
Query: 603 VYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLI-GLYRGFGVSVQGIIIYRA 427
++ LD +TR A + +++G+ C S I +G+ GLY G + G + A
Sbjct: 33 MHSLDTVKTRQQAALYTN----KYNGMVKCYSTILCEEGVFHGLYSGVCPMLIGSLPATA 88
Query: 426 SYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTV-AGIISYPFDTVRRRMMMQ----SGR 262
+F Y+ + L N P + + +A V + A ++ P + ++ R+ +Q +
Sbjct: 89 LFFSSYEYTKRHLMSNYNLPETLCFLLAGFVGDLFASVVYVPSEVLKTRLQLQGRYNNPH 148
Query: 261 AKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTG-GAFVLVLYDEIKKV 103
+S+ Y + IAK EG FF G + +LR F L+ Y+++++V
Sbjct: 149 FQSNYNYPSFRGAVKQIAKQEGMKTFFYGYRATILRDIPFSGFQLLFYEKLRQV 202
Score = 33.9 bits (74), Expect = 0.024
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -1
Query: 528 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 406
G+ + + ++KS+GL+GL+RGFG + + F FY+
Sbjct: 283 GIRHVLGGLYKSEGLLGLFRGFGPRIFWTSSQSSLMFVFYE 323
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 42.3 bits (95), Expect = 7e-05
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = -1
Query: 519 NCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQ 340
N IS + +S+GL G YRG+ + V + S++ Y+ ++ L N I + I
Sbjct: 121 NTISTLARSEGLKGFYRGYWMGVAIYLPTTVSWWVCYEESKKYLQKQSNWDISVIAPICS 180
Query: 339 TV-TTVAGIISYPFDTVRRRMMMQSGRA 259
+ T VA IS P D V+ R + + A
Sbjct: 181 ALGTVVATTISTPLDIVKTRYQVATSSA 208
Score = 33.5 bits (73), Expect = 0.031
Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 1/135 (0%)
Frame = -1
Query: 501 FKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVA 322
FK+ L YRG +S+ I Y Y A+ ++ T V+
Sbjct: 38 FKTMPLKAYYRGLPISLTLITPATCLYLSTYVEAKRRFKPSVGEGAILYSICGMTAEVVS 97
Query: 321 GIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNV-LRGTG 145
+ P + ++ R + K ++ NTI +T+A++EG F++G + V +
Sbjct: 98 SFVWTPLEVIKARTQISQ---KGSVI--NTI---STLARSEGLKGFYRGYWMGVAIYLPT 149
Query: 144 GAFVLVLYDEIKKVL 100
V Y+E KK L
Sbjct: 150 TVSWWVCYEESKKYL 164
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 40.7 bits (91), Expect = 2e-04
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Frame = -1
Query: 534 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLP---DPKNTPI 364
++ + + I I+K +G+ G +RGFGV+ + Y FY+ ++ L D +
Sbjct: 141 YTTIYSSIRDIWKKEGISGFFRGFGVTALRDAPHAGLYVYFYELSKQNLHKLFDRFSPSS 200
Query: 363 VISWAI--AQTVTTVAGIIS--------YPFDTVRRRMMMQSGRAKSDILYKNTIHCWAT 214
+ + V ++G+IS PFD ++ R+ ++ +YKN +H
Sbjct: 201 SVQGTVPHRNIVNVMSGLISGATATAITNPFDMLKTRVQLEPH------IYKNFLHSAKL 254
Query: 213 IAKTEGTSAFFKGAFSNVLR 154
+ EG F G F VLR
Sbjct: 255 VYANEGFRGFLDGFFLRVLR 274
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 40.7 bits (91), Expect = 2e-04
Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 8/136 (5%)
Frame = -1
Query: 492 DGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPD-----PKNTPI-VISWAIAQTVT 331
+G L+RG G ++ G I R+ F Y + +L D +N+ I +++ AIA +T
Sbjct: 117 EGTRALFRGLGPNLIGTIPARSINFFSYGNGKRILADLFNNGQENSQIHLMAAAIAGVIT 176
Query: 330 TVAGIISYPFDTVRRRMMM--QSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVL 157
+ A + P V+ R+ + +SG+A Y+++I C + EG +KG +++L
Sbjct: 177 SAA---TNPIWLVKTRLQLDKKSGQAAQ---YRSSIDCIIKTIRLEGFRGLYKGLSASLL 230
Query: 156 RGTGGAFVLVLYDEIK 109
VLY++ K
Sbjct: 231 GVGESTLQWVLYEKFK 246
Score = 38.3 bits (85), Expect = 0.001
Identities = 42/170 (24%), Positives = 66/170 (38%), Gaps = 14/170 (8%)
Frame = -1
Query: 597 PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGI---IIYRA 427
P+ +TRL D G + S + +CI K + +G GLY+G S+ G+ +
Sbjct: 182 PIWLVKTRLQLDKKSGQAAQYRSSI-DCIIKTIRLEGFRGLYKGLSASLLGVGESTLQWV 240
Query: 426 SYFGFYDTARGMLPDPKNTPI-------VISW----AIAQTVTTVAGIISYPFDTVRRRM 280
Y F K I V+ W A +A I+YP + VR R
Sbjct: 241 LYEKFKHAVAIRQLRRKELGIQETIYDKVLDWGGKLGGAGIAKFMAAGIAYPHEVVRTR- 299
Query: 279 MMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVL 130
+ QS Y I C+ + +G + G +++LR A +L
Sbjct: 300 LRQSPSINGTPKYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNACIL 349
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 40.7 bits (91), Expect = 2e-04
Identities = 32/141 (22%), Positives = 63/141 (44%), Gaps = 3/141 (2%)
Frame = -1
Query: 519 NCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVI-SWAIA 343
+C+ KI K++GL Y+G + + GI + F ++ + TP+ + + ++
Sbjct: 60 DCVKKISKNEGLAAFYKGTVLPLLGIGFCVSIQFTTFEYCKRFF-SRDGTPVTMPQYYVS 118
Query: 342 QTVTTVA-GIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFS 166
++ +A + P + VR R+ +Q+G+ ++LY C I+ G S KG
Sbjct: 119 GAISGLANSFLVGPVEHVRIRLQIQTGK---NVLYHGPWDCIKKISSQYGLSGIMKGYNP 175
Query: 165 NVLRGTGG-AFVLVLYDEIKK 106
R G + Y+ + K
Sbjct: 176 TAAREAHGLGMYFLAYEALVK 196
Score = 39.1 bits (87), Expect = 6e-04
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -1
Query: 318 IISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKG 175
++ PFD V+ R+ QS + +Y N + C I+K EG +AF+KG
Sbjct: 33 LVGQPFDCVKVRLQSQSNVSP---IYNNALDCVKKISKNEGLAAFYKG 77
Score = 26.6 bits (56), Expect = 3.6
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = -1
Query: 600 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 463
YP D ++++ D + + C I+ GL G YRGF
Sbjct: 231 YPFDIVKSKIQTDGFLS--KATYKNSWQCAKGIYTKAGLRGFYRGF 274
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 36.7 bits (81), Expect = 0.003
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 1/133 (0%)
Frame = -1
Query: 507 KIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTT 328
KI+K +GL YRG S+ G ++ F Y+ + L D +A T++
Sbjct: 239 KIYKYEGLAAFYRGLFPSLFG-TLHVGIQFPLYEYFKSFLDDFFGKKSNFHIVLAATLSK 297
Query: 327 V-AGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRG 151
+ A ++YP + +R R +QS A + + + I ++EG ++ G +N +R
Sbjct: 298 IAASTVTYPHEVLRTR--LQSLDAPT---HNSATLLIRDIWRSEGWRKYYSGMATNFIRT 352
Query: 150 TGGAFVLVLYDEI 112
+ V L EI
Sbjct: 353 IPASSVTFLSFEI 365
Score = 29.9 bits (64), Expect = 0.38
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -1
Query: 243 YKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 100
Y NT + I K EG +AF++G F ++ LY+ K L
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHVGIQFPLYEYFKSFL 277
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 35.9 bits (79), Expect = 0.006
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = -1
Query: 528 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGML-PDPKNTPIVISW 352
GL I I+ GL GLY+G ++ + Y F Y+ R +L DP++ +
Sbjct: 61 GLYKAIKHIYHVYGLHGLYQGHTATLYRVFPYAGIKFVAYEQVRRVLIRDPEHETHARRF 120
Query: 351 AIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNT 232
T + +YP + +R R+ + K+ L + T
Sbjct: 121 LSGSLAGTCSVFFTYPLELIRVRLAYITNTGKNPTLTQVT 160
Score = 35.5 bits (78), Expect = 0.008
Identities = 46/172 (26%), Positives = 67/172 (38%), Gaps = 25/172 (14%)
Frame = -1
Query: 615 SLCFVYPLDFARTRLA--ADVGKGDG----------QREFSGLGNCISKIFKSDGLIGLY 472
S+ F YPL+ R RLA + GK +R+F + + + Y
Sbjct: 130 SVFFTYPLELIRVRLAYITNTGKNPTLTQVTKDIFHERDFL-CNKKYPGLSRLSKICNFY 188
Query: 471 RGFGVSVQGIIIYRASYFGFYDTARGM---------LPDPKNTPIVISW--AIAQTVTTV 325
RGF V++ GI Y F YD A + K+ + +W + V
Sbjct: 189 RGFSVTLTGIFPYAGMSFLAYDLATDFFHKQKIDEWVSTKKSDKKLKTWPELLCGAFAGV 248
Query: 324 AG-IISYPFDTVRRRMMMQSGRA-KSDILYKNTIHCWATIAKTEGTSAFFKG 175
G +SYPF+ RR+M + R KS + K + T K G FF G
Sbjct: 249 CGQTVSYPFEVCRRKMQIGGIRKNKSFLRLKQVVQ---TTYKEAGMRGFFVG 297
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 35.5 bits (78), Expect = 0.008
Identities = 38/168 (22%), Positives = 63/168 (37%), Gaps = 14/168 (8%)
Frame = -1
Query: 615 SLCFVYPLDFARTRLAADV-GKGDGQREFSGLGNCISKIFK-------------SDGLIG 478
S YPLD ARTRL+ + G + + N K+ G
Sbjct: 129 SCATTYPLDIARTRLSIETAGLTSRSLAINNVANNSLKVKPLTLWSTLLYIVQHEGGYPA 188
Query: 477 LYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFD 298
LY G ++ ++ Y + F ++ + + + + +++P D
Sbjct: 189 LYNGLPATLLNVVPYVSICFFTFEFCKQKFFSNADLTAFQKLFLGGFTGIIGQTLTFPAD 248
Query: 297 TVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 154
+RRR + YKN I KTEG + FF+G SN+L+
Sbjct: 249 VLRRRFQVNRIPGIGHN-YKNIKSAIFHIYKTEGINGFFRGYSSNMLK 295
Score = 34.7 bits (76), Expect = 0.014
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = -1
Query: 600 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASY 421
+P D R R + G G + + + I I+K++G+ G +RG+ ++ II +
Sbjct: 245 FPADVLRRRFQVNRIPGIGHN-YKNIKSAIFHIYKTEGINGFFRGYSSNMLKIIPVMSIT 303
Query: 420 FGFYDTARGMLPD 382
+ Y+T ML D
Sbjct: 304 WYTYETVSKMLHD 316
Score = 33.1 bits (72), Expect = 0.041
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Frame = -1
Query: 540 REFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGML------PDP 379
+E++ L + + KI+ +GLIG +RG G + Y A F ++ + +
Sbjct: 54 KEYTSLTSTLVKIWNREGLIGFFRGNGTNCLRAFPYGAVQFATFNMLKQRALKNRSHQNL 113
Query: 378 KNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTI 229
+N ++ AIA + +YP D R R+ +++ S L N +
Sbjct: 114 ENHERLLFGAIAGAASCAT---TYPLDIARTRLSIETAGLTSRSLAINNV 160
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 35.5 bits (78), Expect = 0.008
Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 3/172 (1%)
Frame = -1
Query: 615 SLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIII 436
S ++PLD A+ ++ A + + D + F S I + + LY G ++V G
Sbjct: 14 STLIMHPLDLAKIQMQASMNQ-DSKSLFQVFK---SNIGSNGSIRSLYHGLSINVLGSAA 69
Query: 435 YRASYFGFYDTARG--MLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGR 262
+YF YD ++ M P N + ++ QT+ + +G + + + R
Sbjct: 70 SWGAYFCIYDFSKRVVMSMTPFNNGEI---SVLQTLCS-SGFAGCIVAALTNPIWVVKSR 125
Query: 261 AKSD-ILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIK 109
S + Y N + + K EG + G ++L + GA + Y+++K
Sbjct: 126 ILSKRVNYTNPFFGFYDLIKNEGLRGCYAGFAPSLLGVSQGALQFMAYEKLK 177
Score = 30.7 bits (66), Expect = 0.22
Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 1/118 (0%)
Frame = -1
Query: 504 IFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTV 325
+ K++GL G Y GF S+ G + A F Y+ + + P + + + V
Sbjct: 143 LIKNEGLRGCYAGFAPSLLG-VSQGALQFMAYEKLKLW---KQRRPTSLDYIFMSAASKV 198
Query: 324 -AGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 154
A + YP +R R+ + +S + + W + +G F+KG ++LR
Sbjct: 199 FAAVNMYPLLVIRTRLQVMRSPHRS--IMNLVLQTW----RLQGILGFYKGFLPHLLR 250
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 35.1 bits (77), Expect = 0.010
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = -1
Query: 609 CFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYR 430
C+ PL+ AR + + + KG Q G+ I I+K++G+ GLYRG V G+ Y+
Sbjct: 220 CWNQPLEVARVEMQS-LTKGI-QHSSPGIMQTIMSIYKNNGIKGLYRG-AVPRMGLGAYQ 276
Query: 429 ASYFGFY-DTARGML 388
F D RG L
Sbjct: 277 TFVMVFLADCVRGYL 291
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 31.5 bits (68), Expect = 0.13
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -1
Query: 534 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTAR 397
F + +C K++GL GLYRG + + + R+ F YD+ +
Sbjct: 50 FPTIRSCFQNAVKNEGLKGLYRGLTLPLISATLSRSVSFTVYDSLK 95
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 29.5 bits (63), Expect = 0.51
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = +3
Query: 537 HAGHRPYRHRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTASSCQRRR 695
H P R R RD RS +RS R HR DY RS ++ + RR
Sbjct: 140 HQSRSPVRSRDRD---RSSRSSRSRHPSSRSRHRYDDYSRSPPYSSRHSRSRR 189
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 28.3 bits (60), Expect = 1.2
Identities = 17/83 (20%), Positives = 37/83 (44%)
Frame = -1
Query: 531 SGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISW 352
S L + + +G+ L+RG V+ ++Y A+ F + + + + +++
Sbjct: 49 SSLRPVFKETVQKEGVRALWRGNVVAELLYLVYGAAEFVAFSKLKHLTENLAMNDHAVNF 108
Query: 351 AIAQTVTTVAGIISYPFDTVRRR 283
+ A + SYP DT+R +
Sbjct: 109 LCGTSAGIFATLTSYPLDTMRTK 131
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 27.9 bits (59), Expect = 1.6
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = -1
Query: 528 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDP 379
G G ++I+K G GL+ G GV + I + + YD+ + M P
Sbjct: 258 GAGAAAARIYKEIGFSGLWNGLGVRIVMIGTLTGAQWLIYDSFKIMCGFP 307
Score = 26.6 bits (56), Expect = 3.6
Identities = 25/116 (21%), Positives = 45/116 (38%), Gaps = 6/116 (5%)
Frame = -1
Query: 504 IFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTAR---GMLPDPKNT---PIVISWAIA 343
I +GL GLY G ++ G + +GFY+ + L + I A +
Sbjct: 68 ILSKEGLRGLYTGGMPTLIGYSLQGCGKYGFYELFKHKYSTLVGAQKAHEYRTSIYLAAS 127
Query: 342 QTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKG 175
+ +A I+ P + ++ R+ + R T W+ I EG ++G
Sbjct: 128 ASAELLADIMLCPMEAIKVRVQTSNPR-----FANTTREAWSKIVTNEGFGTLYRG 178
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = -1
Query: 513 ISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGML 388
+ +I+K +G+ G +G G+ V + + Y G Y+ + L
Sbjct: 206 VRRIYKENGIFGFEKGLGLRVFASSLGLSIYLGTYEHVKSHL 247
>SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 327
Score = 25.8 bits (54), Expect = 6.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 396 GMLPDPKNTPIVISWAIAQTVTTV 325
GMLPDPK+ P++ +T V
Sbjct: 89 GMLPDPKSIPVISQALTKYKITDV 112
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 6.3
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 125 KTSTKAPPVPLRTLEKAPL 181
K S+KAPPVPL + + P+
Sbjct: 1016 KLSSKAPPVPLPSADAPPI 1034
>SPAC2F3.01 ||SPAC323.09|mannosyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 25.8 bits (54), Expect = 6.3
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = -1
Query: 462 GVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAG 319
G+ + G+I+ + Y+T R M+P P +S + T+ G
Sbjct: 12 GIPICGVILLILWGYSLYNTLRFMVPGKATEPFTLSLSDVSDDTSAPG 59
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.134 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,431,803
Number of Sequences: 5004
Number of extensions: 44387
Number of successful extensions: 198
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 339215786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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