Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17e24
(790 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT015179-1|AAT94408.1| 281|Drosophila melanogaster SD13345p pro... 85 1e-16
AY113635-1|AAM29640.1| 281|Drosophila melanogaster RH73277p pro... 85 1e-16
AE014134-1723|AAF52828.2| 281|Drosophila melanogaster CG4598-PA... 85 1e-16
AY061252-1|AAL28800.1| 280|Drosophila melanogaster LD18769p pro... 60 4e-09
AE014134-1724|AAF52829.1| 280|Drosophila melanogaster CG4594-PA... 60 4e-09
BT011480-1|AAR99138.1| 287|Drosophila melanogaster RE09736p pro... 55 1e-07
AY060650-1|AAL28198.1| 188|Drosophila melanogaster GH07905p pro... 55 1e-07
AE014134-1725|AAF52830.2| 287|Drosophila melanogaster CG4592-PA... 55 1e-07
>BT015179-1|AAT94408.1| 281|Drosophila melanogaster SD13345p
protein.
Length = 281
Score = 84.6 bits (200), Expect = 1e-16
Identities = 42/94 (44%), Positives = 60/94 (63%)
Frame = -2
Query: 750 MFNTDEALKVGLIDVLATDKADAVXXXXXXXXXXXXISPIARALTKQKIRAEPLTWLIKN 571
MF T+EALKVGLID A +K +A+ ++P+AR+LTKQ+ RA L L
Sbjct: 187 MFTTEEALKVGLIDETANNKEEAIEKCVAFIGTFAKVNPLARSLTKQQFRAADLQQLQNG 246
Query: 570 RKQDTDEFLTFVQNPKVQQSLELYIQALKQKSAK 469
RK+D ++FL FV P VQ+ L +Y++ LK+K+ K
Sbjct: 247 RKEDLEKFLFFVNQPAVQKGLGIYLEGLKKKAKK 280
>AY113635-1|AAM29640.1| 281|Drosophila melanogaster RH73277p
protein.
Length = 281
Score = 84.6 bits (200), Expect = 1e-16
Identities = 42/94 (44%), Positives = 60/94 (63%)
Frame = -2
Query: 750 MFNTDEALKVGLIDVLATDKADAVXXXXXXXXXXXXISPIARALTKQKIRAEPLTWLIKN 571
MF T+EALKVGLID A +K +A+ ++P+AR+LTKQ+ RA L L
Sbjct: 187 MFTTEEALKVGLIDETANNKEEAIEKCVAFIGTFAKVNPLARSLTKQQFRAADLQQLQNG 246
Query: 570 RKQDTDEFLTFVQNPKVQQSLELYIQALKQKSAK 469
RK+D ++FL FV P VQ+ L +Y++ LK+K+ K
Sbjct: 247 RKEDLEKFLFFVNQPAVQKGLGIYLEGLKKKAKK 280
>AE014134-1723|AAF52828.2| 281|Drosophila melanogaster CG4598-PA
protein.
Length = 281
Score = 84.6 bits (200), Expect = 1e-16
Identities = 42/94 (44%), Positives = 60/94 (63%)
Frame = -2
Query: 750 MFNTDEALKVGLIDVLATDKADAVXXXXXXXXXXXXISPIARALTKQKIRAEPLTWLIKN 571
MF T+EALKVGLID A +K +A+ ++P+AR+LTKQ+ RA L L
Sbjct: 187 MFTTEEALKVGLIDETANNKEEAIEKCVAFIGTFAKVNPLARSLTKQQFRAADLQQLQNG 246
Query: 570 RKQDTDEFLTFVQNPKVQQSLELYIQALKQKSAK 469
RK+D ++FL FV P VQ+ L +Y++ LK+K+ K
Sbjct: 247 RKEDLEKFLFFVNQPAVQKGLGIYLEGLKKKAKK 280
>AY061252-1|AAL28800.1| 280|Drosophila melanogaster LD18769p
protein.
Length = 280
Score = 59.7 bits (138), Expect = 4e-09
Identities = 31/94 (32%), Positives = 51/94 (54%)
Frame = -2
Query: 750 MFNTDEALKVGLIDVLATDKADAVXXXXXXXXXXXXISPIARALTKQKIRAEPLTWLIKN 571
MF T EA +VGLID +A+ K +A+ ++P+AR LTK + R + +
Sbjct: 187 MFTTQEAFEVGLIDEIASSKEEALEKCAAFIGTFAKVNPLARGLTKLQFRGDNIKEFEMI 246
Query: 570 RKQDTDEFLTFVQNPKVQQSLELYIQALKQKSAK 469
R++D +F+ +P VQ+ + Y++ LK K K
Sbjct: 247 REKDIADFVALASSPGVQKVMGAYLENLKNKVKK 280
>AE014134-1724|AAF52829.1| 280|Drosophila melanogaster CG4594-PA
protein.
Length = 280
Score = 59.7 bits (138), Expect = 4e-09
Identities = 31/94 (32%), Positives = 51/94 (54%)
Frame = -2
Query: 750 MFNTDEALKVGLIDVLATDKADAVXXXXXXXXXXXXISPIARALTKQKIRAEPLTWLIKN 571
MF T EA +VGLID +A+ K +A+ ++P+AR LTK + R + +
Sbjct: 187 MFTTQEAFEVGLIDEIASSKEEALEKCAAFIGTFAKVNPLARGLTKLQFRGDNIKEFEMI 246
Query: 570 RKQDTDEFLTFVQNPKVQQSLELYIQALKQKSAK 469
R++D +F+ +P VQ+ + Y++ LK K K
Sbjct: 247 REKDIADFVALASSPGVQKVMGAYLENLKNKVKK 280
>BT011480-1|AAR99138.1| 287|Drosophila melanogaster RE09736p
protein.
Length = 287
Score = 55.2 bits (127), Expect = 1e-07
Identities = 28/91 (30%), Positives = 49/91 (53%)
Frame = -2
Query: 750 MFNTDEALKVGLIDVLATDKADAVXXXXXXXXXXXXISPIARALTKQKIRAEPLTWLIKN 571
+F + EAL VGL+D +A K +A+ +P+AR LTK+ R + L+++
Sbjct: 196 LFASQEALDVGLVDEIACSKEEALSKCAAFIATFDKTNPVARCLTKRMCREPDVRELLQD 255
Query: 570 RKQDTDEFLTFVQNPKVQQSLELYIQALKQK 478
R D E + +V P Q+ L +++ LK++
Sbjct: 256 RAADLKECVDYVTTPLFQEGLCAHLEGLKKR 286
>AY060650-1|AAL28198.1| 188|Drosophila melanogaster GH07905p
protein.
Length = 188
Score = 55.2 bits (127), Expect = 1e-07
Identities = 28/91 (30%), Positives = 49/91 (53%)
Frame = -2
Query: 750 MFNTDEALKVGLIDVLATDKADAVXXXXXXXXXXXXISPIARALTKQKIRAEPLTWLIKN 571
+F + EAL VGL+D +A K +A+ +P+AR LTK+ R + L+++
Sbjct: 97 LFASQEALDVGLVDEIACSKEEALSKCAAFIATFDKTNPVARCLTKRMCREPDVRELLQD 156
Query: 570 RKQDTDEFLTFVQNPKVQQSLELYIQALKQK 478
R D E + +V P Q+ L +++ LK++
Sbjct: 157 RAADLKECVDYVTTPLFQEGLCAHLEGLKKR 187
>AE014134-1725|AAF52830.2| 287|Drosophila melanogaster CG4592-PA
protein.
Length = 287
Score = 55.2 bits (127), Expect = 1e-07
Identities = 28/91 (30%), Positives = 49/91 (53%)
Frame = -2
Query: 750 MFNTDEALKVGLIDVLATDKADAVXXXXXXXXXXXXISPIARALTKQKIRAEPLTWLIKN 571
+F + EAL VGL+D +A K +A+ +P+AR LTK+ R + L+++
Sbjct: 196 LFASQEALDVGLVDEIACSKEEALSKCAAFIATFDKTNPVARCLTKRMCREPDVRELLQD 255
Query: 570 RKQDTDEFLTFVQNPKVQQSLELYIQALKQK 478
R D E + +V P Q+ L +++ LK++
Sbjct: 256 RAADLKECVDYVTTPLFQEGLCAHLEGLKKR 286
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,288,556
Number of Sequences: 53049
Number of extensions: 571400
Number of successful extensions: 1050
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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