Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17e19
(793 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456607-1|CAG30493.1| 307|Homo sapiens UFD1L protein. 209 8e-54
BC005087-1|AAH05087.1| 307|Homo sapiens ubiquitin fusion degrad... 209 8e-54
BC001049-1|AAH01049.1| 307|Homo sapiens ubiquitin fusion degrad... 209 8e-54
AY101594-1|AAM48288.1| 307|Homo sapiens ubiquitin fusion degrad... 209 8e-54
AJ239058-1|CAC20414.1| 307|Homo sapiens ubiquitin fusion degrad... 209 8e-54
AF141201-1|AAD28788.1| 307|Homo sapiens ubiquitin fusion-degrad... 209 8e-54
U64444-1|AAD08720.1| 343|Homo sapiens ubiquitin fusion-degradat... 206 5e-53
BC150270-1|AAI50271.1| 1781|Homo sapiens MYST4 protein protein. 34 0.51
BC021128-1|AAH21128.1| 887|Homo sapiens MYST4 protein protein. 34 0.51
AF217500-1|AAL56647.1| 2072|Homo sapiens histone acetyltransfera... 34 0.51
AF119231-1|AAF00100.1| 2073|Homo sapiens histone acetyltransfera... 34 0.51
AF119230-1|AAF00099.1| 1890|Homo sapiens histone acetyltransfera... 34 0.51
AF113514-1|AAF00095.1| 1781|Homo sapiens histone acetyltransfera... 34 0.51
AB002381-1|BAA20837.2| 1781|Homo sapiens KIAA0383 protein. 34 0.51
>CR456607-1|CAG30493.1| 307|Homo sapiens UFD1L protein.
Length = 307
Score = 209 bits (511), Expect = 8e-54
Identities = 116/198 (58%), Positives = 140/198 (70%), Gaps = 2/198 (1%)
Frame = -2
Query: 735 ESVSLPVATFSKFQPLSEDFLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVL 556
ESV+L VAT+SKFQP S DFLDITNPKAVLEN LRNF+CLTTGDVIAI YN K+YEL V+
Sbjct: 113 ESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVM 172
Query: 555 ETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSRSNDGAVEGMDEDPAAMMPESSGFRAFS 376
ETKP AV IIECDMNV+F P+GYKE + ++ + EG + D + E GFRAFS
Sbjct: 173 ETKPDKAVSIIECDMNVDFDAPLGYKEPER-QVQHEESTEG-EADHSGYAGE-LGFRAFS 229
Query: 375 GEGNRLDGKKKKL-ISESDSEPGTSQPRQSYVRGIPDYDFVIGTLRFIRNSRP-AKDPKE 202
G GNRLDGKKK + S S +PG + RGIP+Y+F +G + FIRNSRP K +E
Sbjct: 230 GSGNRLDGKKKGVEPSPSPIKPGDIK------RGIPNYEFKLGKITFIRNSRPLVKKVEE 283
Query: 201 EAQTEPFQAFTGEGFTLR 148
+ F AF+GEG +LR
Sbjct: 284 DEAGGRFVAFSGEGQSLR 301
Score = 38.3 bits (85), Expect = 0.031
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -1
Query: 793 LPHWMMANLVLEEGALIQI 737
LPHWMM NL+LEEG L+Q+
Sbjct: 94 LPHWMMQNLLLEEGGLVQV 112
>BC005087-1|AAH05087.1| 307|Homo sapiens ubiquitin fusion
degradation 1 like (yeast) protein.
Length = 307
Score = 209 bits (511), Expect = 8e-54
Identities = 116/198 (58%), Positives = 140/198 (70%), Gaps = 2/198 (1%)
Frame = -2
Query: 735 ESVSLPVATFSKFQPLSEDFLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVL 556
ESV+L VAT+SKFQP S DFLDITNPKAVLEN LRNF+CLTTGDVIAI YN K+YEL V+
Sbjct: 113 ESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVM 172
Query: 555 ETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSRSNDGAVEGMDEDPAAMMPESSGFRAFS 376
ETKP AV IIECDMNV+F P+GYKE + ++ + EG + D + E GFRAFS
Sbjct: 173 ETKPDKAVSIIECDMNVDFDAPLGYKEPER-QVQHEESTEG-EADHSGYAGE-LGFRAFS 229
Query: 375 GEGNRLDGKKKKL-ISESDSEPGTSQPRQSYVRGIPDYDFVIGTLRFIRNSRP-AKDPKE 202
G GNRLDGKKK + S S +PG + RGIP+Y+F +G + FIRNSRP K +E
Sbjct: 230 GSGNRLDGKKKGVEPSPSPIKPGDIK------RGIPNYEFKLGKITFIRNSRPLVKKVEE 283
Query: 201 EAQTEPFQAFTGEGFTLR 148
+ F AF+GEG +LR
Sbjct: 284 DEAGGRFVAFSGEGQSLR 301
Score = 38.3 bits (85), Expect = 0.031
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -1
Query: 793 LPHWMMANLVLEEGALIQI 737
LPHWMM NL+LEEG L+Q+
Sbjct: 94 LPHWMMQNLLLEEGGLVQV 112
>BC001049-1|AAH01049.1| 307|Homo sapiens ubiquitin fusion
degradation 1 like (yeast) protein.
Length = 307
Score = 209 bits (511), Expect = 8e-54
Identities = 116/198 (58%), Positives = 140/198 (70%), Gaps = 2/198 (1%)
Frame = -2
Query: 735 ESVSLPVATFSKFQPLSEDFLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVL 556
ESV+L VAT+SKFQP S DFLDITNPKAVLEN LRNF+CLTTGDVIAI YN K+YEL V+
Sbjct: 113 ESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVM 172
Query: 555 ETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSRSNDGAVEGMDEDPAAMMPESSGFRAFS 376
ETKP AV IIECDMNV+F P+GYKE + ++ + EG + D + E GFRAFS
Sbjct: 173 ETKPDKAVSIIECDMNVDFDAPLGYKEPER-QVQHEESTEG-EADHSGYAGE-LGFRAFS 229
Query: 375 GEGNRLDGKKKKL-ISESDSEPGTSQPRQSYVRGIPDYDFVIGTLRFIRNSRP-AKDPKE 202
G GNRLDGKKK + S S +PG + RGIP+Y+F +G + FIRNSRP K +E
Sbjct: 230 GSGNRLDGKKKGVEPSPSPIKPGDIK------RGIPNYEFKLGKITFIRNSRPLVKKVEE 283
Query: 201 EAQTEPFQAFTGEGFTLR 148
+ F AF+GEG +LR
Sbjct: 284 DEAGGRFVAFSGEGQSLR 301
Score = 38.3 bits (85), Expect = 0.031
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -1
Query: 793 LPHWMMANLVLEEGALIQI 737
LPHWMM NL+LEEG L+Q+
Sbjct: 94 LPHWMMQNLLLEEGGLVQV 112
>AY101594-1|AAM48288.1| 307|Homo sapiens ubiquitin fusion
degradation 1-like protein.
Length = 307
Score = 209 bits (511), Expect = 8e-54
Identities = 116/198 (58%), Positives = 140/198 (70%), Gaps = 2/198 (1%)
Frame = -2
Query: 735 ESVSLPVATFSKFQPLSEDFLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVL 556
ESV+L VAT+SKFQP S DFLDITNPKAVLEN LRNF+CLTTGDVIAI YN K+YEL V+
Sbjct: 113 ESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVM 172
Query: 555 ETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSRSNDGAVEGMDEDPAAMMPESSGFRAFS 376
ETKP AV IIECDMNV+F P+GYKE + ++ + EG + D + E GFRAFS
Sbjct: 173 ETKPDKAVSIIECDMNVDFDAPLGYKEPER-QVQHEESTEG-EADHSGYAGE-LGFRAFS 229
Query: 375 GEGNRLDGKKKKL-ISESDSEPGTSQPRQSYVRGIPDYDFVIGTLRFIRNSRP-AKDPKE 202
G GNRLDGKKK + S S +PG + RGIP+Y+F +G + FIRNSRP K +E
Sbjct: 230 GSGNRLDGKKKGVEPSPSPIKPGDIK------RGIPNYEFKLGKITFIRNSRPLVKKVEE 283
Query: 201 EAQTEPFQAFTGEGFTLR 148
+ F AF+GEG +LR
Sbjct: 284 DEAGGRFVAFSGEGQSLR 301
Score = 38.3 bits (85), Expect = 0.031
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -1
Query: 793 LPHWMMANLVLEEGALIQI 737
LPHWMM NL+LEEG L+Q+
Sbjct: 94 LPHWMMQNLLLEEGGLVQV 112
>AJ239058-1|CAC20414.1| 307|Homo sapiens ubiquitin fusion
degradation 1 protein protein.
Length = 307
Score = 209 bits (511), Expect = 8e-54
Identities = 116/198 (58%), Positives = 140/198 (70%), Gaps = 2/198 (1%)
Frame = -2
Query: 735 ESVSLPVATFSKFQPLSEDFLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVL 556
ESV+L VAT+SKFQP S DFLDITNPKAVLEN LRNF+CLTTGDVIAI YN K+YEL V+
Sbjct: 113 ESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVM 172
Query: 555 ETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSRSNDGAVEGMDEDPAAMMPESSGFRAFS 376
ETKP AV IIECDMNV+F P+GYKE + ++ + EG + D + E GFRAFS
Sbjct: 173 ETKPDKAVSIIECDMNVDFDAPLGYKEPER-QVQHEESTEG-EADHSGYAGE-LGFRAFS 229
Query: 375 GEGNRLDGKKKKL-ISESDSEPGTSQPRQSYVRGIPDYDFVIGTLRFIRNSRP-AKDPKE 202
G GNRLDGKKK + S S +PG + RGIP+Y+F +G + FIRNSRP K +E
Sbjct: 230 GSGNRLDGKKKGVEPSPSPIKPGDIK------RGIPNYEFKLGKITFIRNSRPLVKKVEE 283
Query: 201 EAQTEPFQAFTGEGFTLR 148
+ F AF+GEG +LR
Sbjct: 284 DEAGGRFVAFSGEGQSLR 301
Score = 38.3 bits (85), Expect = 0.031
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -1
Query: 793 LPHWMMANLVLEEGALIQI 737
LPHWMM NL+LEEG L+Q+
Sbjct: 94 LPHWMMQNLLLEEGGLVQV 112
>AF141201-1|AAD28788.1| 307|Homo sapiens ubiquitin
fusion-degradation 1 protein protein.
Length = 307
Score = 209 bits (511), Expect = 8e-54
Identities = 116/198 (58%), Positives = 140/198 (70%), Gaps = 2/198 (1%)
Frame = -2
Query: 735 ESVSLPVATFSKFQPLSEDFLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVL 556
ESV+L VAT+SKFQP S DFLDITNPKAVLEN LRNF+CLTTGDVIAI YN K+YEL V+
Sbjct: 113 ESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVM 172
Query: 555 ETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSRSNDGAVEGMDEDPAAMMPESSGFRAFS 376
ETKP AV IIECDMNV+F P+GYKE + ++ + EG + D + E GFRAFS
Sbjct: 173 ETKPDKAVSIIECDMNVDFDAPLGYKEPER-QVQHEESTEG-EADHSGYAGE-LGFRAFS 229
Query: 375 GEGNRLDGKKKKL-ISESDSEPGTSQPRQSYVRGIPDYDFVIGTLRFIRNSRP-AKDPKE 202
G GNRLDGKKK + S S +PG + RGIP+Y+F +G + FIRNSRP K +E
Sbjct: 230 GSGNRLDGKKKGVEPSPSPIKPGDIK------RGIPNYEFKLGKITFIRNSRPLVKKVEE 283
Query: 201 EAQTEPFQAFTGEGFTLR 148
+ F AF+GEG +LR
Sbjct: 284 DEAGGRFVAFSGEGQSLR 301
Score = 38.3 bits (85), Expect = 0.031
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -1
Query: 793 LPHWMMANLVLEEGALIQI 737
LPHWMM NL+LEEG L+Q+
Sbjct: 94 LPHWMMQNLLLEEGGLVQV 112
>U64444-1|AAD08720.1| 343|Homo sapiens ubiquitin fusion-degradation
1 like protein protein.
Length = 343
Score = 206 bits (504), Expect = 5e-53
Identities = 115/198 (58%), Positives = 139/198 (70%), Gaps = 2/198 (1%)
Frame = -2
Query: 735 ESVSLPVATFSKFQPLSEDFLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVL 556
ESV+L VAT+SKFQP S DFLDITNPKAVLEN LRNF+CLTTGDVIAI YN K+YEL V+
Sbjct: 149 ESVNLQVATYSKFQPQSADFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVM 208
Query: 555 ETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSRSNDGAVEGMDEDPAAMMPESSGFRAFS 376
ETKP AV I ECDMNV+F P+GYKE + ++ + EG + D + E GFRAFS
Sbjct: 209 ETKPDKAVSIHECDMNVDFDAPLGYKEPER-QVQHEESTEG-EADHSGYAGE-LGFRAFS 265
Query: 375 GEGNRLDGKKKKL-ISESDSEPGTSQPRQSYVRGIPDYDFVIGTLRFIRNSRP-AKDPKE 202
G GNRLDGKKK + S S +PG + RGIP+Y+F +G + FIRNSRP K +E
Sbjct: 266 GSGNRLDGKKKGVEPSPSPIKPGDIK------RGIPNYEFKLGKITFIRNSRPLVKKVEE 319
Query: 201 EAQTEPFQAFTGEGFTLR 148
+ F AF+GEG +LR
Sbjct: 320 DEAGGRFVAFSGEGQSLR 337
Score = 38.3 bits (85), Expect = 0.031
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -1
Query: 793 LPHWMMANLVLEEGALIQI 737
LPHWMM NL+LEEG L+Q+
Sbjct: 130 LPHWMMQNLLLEEGGLVQV 148
Score = 35.1 bits (77), Expect = 0.29
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1
Query: 793 LPHWMMANLVLEEGALIQI 737
LPHWMM NL+LEE L+Q+
Sbjct: 94 LPHWMMQNLLLEEDGLVQL 112
>BC150270-1|AAI50271.1| 1781|Homo sapiens MYST4 protein protein.
Length = 1781
Score = 34.3 bits (75), Expect = 0.51
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -2
Query: 564 CVLETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSRSNDGAVEGMDE 424
CV+E P ++ + +C M F PP+ E S +N G E M +
Sbjct: 1462 CVVERPPSSSQQLAQCSMAANFTPPMQLAEIPETSNANIGLYERMGQ 1508
>BC021128-1|AAH21128.1| 887|Homo sapiens MYST4 protein protein.
Length = 887
Score = 34.3 bits (75), Expect = 0.51
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -2
Query: 564 CVLETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSRSNDGAVEGMDE 424
CV+E P ++ + +C M F PP+ E S +N G E M +
Sbjct: 568 CVVERPPSSSQQLAQCSMAANFTPPMQLAEIPETSNANIGLYERMGQ 614
>AF217500-1|AAL56647.1| 2072|Homo sapiens histone acetyltransferase
MOZ2 protein.
Length = 2072
Score = 34.3 bits (75), Expect = 0.51
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -2
Query: 564 CVLETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSRSNDGAVEGMDE 424
CV+E P ++ + +C M F PP+ E S +N G E M +
Sbjct: 1753 CVVERPPSSSQQLAQCSMAANFTPPMQLAEIPETSNANIGLYERMGQ 1799
>AF119231-1|AAF00100.1| 2073|Homo sapiens histone acetyltransferase
MORF beta protein.
Length = 2073
Score = 34.3 bits (75), Expect = 0.51
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -2
Query: 564 CVLETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSRSNDGAVEGMDE 424
CV+E P ++ + +C M F PP+ E S +N G E M +
Sbjct: 1754 CVVERPPSSSQQLAQCSMAANFTPPMQLAEIPETSNANIGLYERMGQ 1800
>AF119230-1|AAF00099.1| 1890|Homo sapiens histone acetyltransferase
MORF alpha protein.
Length = 1890
Score = 34.3 bits (75), Expect = 0.51
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -2
Query: 564 CVLETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSRSNDGAVEGMDE 424
CV+E P ++ + +C M F PP+ E S +N G E M +
Sbjct: 1571 CVVERPPSSSQQLAQCSMAANFTPPMQLAEIPETSNANIGLYERMGQ 1617
>AF113514-1|AAF00095.1| 1781|Homo sapiens histone acetyltransferase
MORF protein.
Length = 1781
Score = 34.3 bits (75), Expect = 0.51
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -2
Query: 564 CVLETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSRSNDGAVEGMDE 424
CV+E P ++ + +C M F PP+ E S +N G E M +
Sbjct: 1462 CVVERPPSSSQQLAQCSMAANFTPPMQLAEIPETSNANIGLYERMGQ 1508
>AB002381-1|BAA20837.2| 1781|Homo sapiens KIAA0383 protein.
Length = 1781
Score = 34.3 bits (75), Expect = 0.51
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -2
Query: 564 CVLETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSRSNDGAVEGMDE 424
CV+E P ++ + +C M F PP+ E S +N G E M +
Sbjct: 1462 CVVERPPSSSQQLAQCSMAANFTPPMQLAEIPETSNANIGLYERMGQ 1508
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,611,491
Number of Sequences: 237096
Number of extensions: 2425362
Number of successful extensions: 4911
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4897
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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