Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17e17
(755 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC022777-1|AAH22777.1| 422|Homo sapiens acylglycerol kinase pro... 91 5e-18
AK222769-1|BAD96489.1| 422|Homo sapiens multi-substrate lipid k... 91 5e-18
AK001704-1|BAA91848.1| 422|Homo sapiens protein ( Homo sapiens ... 91 5e-18
AJ278150-1|CAB93536.1| 422|Homo sapiens putative lipid kinase p... 91 5e-18
AC099547-1|AAS07537.1| 162|Homo sapiens unknown protein. 39 0.022
U29344-1|AAA73576.1| 2509|Homo sapiens fatty acid synthase protein. 35 0.36
BC063242-1|AAH63242.1| 2511|Homo sapiens fatty acid synthase pro... 35 0.36
BC014631-1|AAH14631.1| 774|Homo sapiens FASN protein protein. 35 0.36
AY451392-1|AAS09886.1| 2511|Homo sapiens fatty acid synthase pro... 35 0.36
AB209988-1|BAE06070.1| 2548|Homo sapiens FASN variant protein pr... 35 0.36
>BC022777-1|AAH22777.1| 422|Homo sapiens acylglycerol kinase
protein.
Length = 422
Score = 90.6 bits (215), Expect = 5e-18
Identities = 74/262 (28%), Positives = 132/262 (50%), Gaps = 11/262 (4%)
Frame = -1
Query: 755 PLGRTNSIGNTLFPNGKGVQKVKQLITASMAIIKGNTVWKDAMKIEQVTDESETPNRPIY 576
PLG T+S+ +TLF + KV+ + A++AI+KG TV D + Q+ E E +P++
Sbjct: 153 PLGETSSLSHTLF--AESGNKVQHITDATLAIVKGETVPLDVL---QIKGEKE---QPVF 204
Query: 575 AMASMEWGAFRDTLAKKDKYWFYGPLREYAAYIFNGYKSSLNWNCSGTIKYTPPCVGCTN 396
AM + WG+FRD K KYW+ GPL+ AA+ F+ K + +I YT P N
Sbjct: 205 AMTGLRWGSFRDAGVKVSKYWYLGPLKIKAAHFFSTLKEWPQTH-QASISYTGPTERPPN 263
Query: 395 ----CTAKRPEVKRKWF-FVSSTEAAGQLDQTKILNPECLTSKELCFRTCDFKIKTQNVA 231
+RP + R+ ++S A Q ++ ++PE K++ T + I T+N
Sbjct: 264 EPEETPVQRPSLYRRILRRLASYWAQPQDALSQEVSPE--VWKDVQLSTIELSITTRNNQ 321
Query: 230 MN--HQIPALSIFLGRNSYSYTDFVSEGWRRIKTN----SDPEPIFARTIEITPKETDRD 69
++ + L+I + ++ S DF++ G R+++ E + A + E
Sbjct: 322 LDPTSKEDFLNICIEPDTISKGDFITIGSRKVRNPKLHVEGTECLQASQCTLLIPEGAGG 381
Query: 68 TVIEIDKEDFDMKPIKITLMPK 3
+ ID E+++ P+++ L+P+
Sbjct: 382 S-FSIDSEEYEAMPVEVKLLPR 402
>AK222769-1|BAD96489.1| 422|Homo sapiens multi-substrate lipid
kinase variant protein.
Length = 422
Score = 90.6 bits (215), Expect = 5e-18
Identities = 74/262 (28%), Positives = 132/262 (50%), Gaps = 11/262 (4%)
Frame = -1
Query: 755 PLGRTNSIGNTLFPNGKGVQKVKQLITASMAIIKGNTVWKDAMKIEQVTDESETPNRPIY 576
PLG T+S+ +TLF + KV+ + A++AI+KG TV D + Q+ E E +P++
Sbjct: 153 PLGETSSLSHTLF--AESGNKVQHITDATLAIVKGETVPLDVL---QIKGEKE---QPVF 204
Query: 575 AMASMEWGAFRDTLAKKDKYWFYGPLREYAAYIFNGYKSSLNWNCSGTIKYTPPCVGCTN 396
AM + WG+FRD K KYW+ GPL+ AA+ F+ K + +I YT P N
Sbjct: 205 AMTGLRWGSFRDAGVKVSKYWYLGPLKIKAAHFFSTLKEWPQTH-QASISYTGPTERPPN 263
Query: 395 ----CTAKRPEVKRKWF-FVSSTEAAGQLDQTKILNPECLTSKELCFRTCDFKIKTQNVA 231
+RP + R+ ++S A Q ++ ++PE K++ T + I T+N
Sbjct: 264 EPEETPVQRPSLYRRILRRLASYWAQPQDALSQEVSPE--VWKDVQLSTIELSITTRNNQ 321
Query: 230 MN--HQIPALSIFLGRNSYSYTDFVSEGWRRIKTN----SDPEPIFARTIEITPKETDRD 69
++ + L+I + ++ S DF++ G R+++ E + A + E
Sbjct: 322 LDPTSKEDFLNICIEPDTISKGDFITIGSRKVRNPKLHVEGTECLQASQCTLLIPEGAGG 381
Query: 68 TVIEIDKEDFDMKPIKITLMPK 3
+ ID E+++ P+++ L+P+
Sbjct: 382 S-FSIDSEEYEAMPVEVKLLPR 402
>AK001704-1|BAA91848.1| 422|Homo sapiens protein ( Homo sapiens
cDNA FLJ10842 fis, clone NT2RP4001343. ).
Length = 422
Score = 90.6 bits (215), Expect = 5e-18
Identities = 74/262 (28%), Positives = 132/262 (50%), Gaps = 11/262 (4%)
Frame = -1
Query: 755 PLGRTNSIGNTLFPNGKGVQKVKQLITASMAIIKGNTVWKDAMKIEQVTDESETPNRPIY 576
PLG T+S+ +TLF + KV+ + A++AI+KG TV D + Q+ E E +P++
Sbjct: 153 PLGETSSLSHTLF--AESGNKVQHITDATLAIVKGETVPLDVL---QIKGEKE---QPVF 204
Query: 575 AMASMEWGAFRDTLAKKDKYWFYGPLREYAAYIFNGYKSSLNWNCSGTIKYTPPCVGCTN 396
AM + WG+FRD K KYW+ GPL+ AA+ F+ K + +I YT P N
Sbjct: 205 AMTGLRWGSFRDAGVKVSKYWYLGPLKIKAAHFFSTLKEWPQTH-QASISYTGPTERPPN 263
Query: 395 ----CTAKRPEVKRKWF-FVSSTEAAGQLDQTKILNPECLTSKELCFRTCDFKIKTQNVA 231
+RP + R+ ++S A Q ++ ++PE K++ T + I T+N
Sbjct: 264 EPEETPVQRPSLYRRILRRLASYWAQPQDALSQEVSPE--VWKDVQLSTIELSITTRNNQ 321
Query: 230 MN--HQIPALSIFLGRNSYSYTDFVSEGWRRIKTN----SDPEPIFARTIEITPKETDRD 69
++ + L+I + ++ S DF++ G R+++ E + A + E
Sbjct: 322 LDPTSKEDFLNICIEPDTISKGDFITIGSRKVRNPKLHVEGTECLQASQCTLLIPEGAGG 381
Query: 68 TVIEIDKEDFDMKPIKITLMPK 3
+ ID E+++ P+++ L+P+
Sbjct: 382 S-FSIDSEEYEAMPVEVKLLPR 402
>AJ278150-1|CAB93536.1| 422|Homo sapiens putative lipid kinase
protein.
Length = 422
Score = 90.6 bits (215), Expect = 5e-18
Identities = 74/262 (28%), Positives = 132/262 (50%), Gaps = 11/262 (4%)
Frame = -1
Query: 755 PLGRTNSIGNTLFPNGKGVQKVKQLITASMAIIKGNTVWKDAMKIEQVTDESETPNRPIY 576
PLG T+S+ +TLF + KV+ + A++AI+KG TV D + Q+ E E +P++
Sbjct: 153 PLGETSSLSHTLF--AESGNKVQHITDATLAIVKGETVPLDVL---QIKGEKE---QPVF 204
Query: 575 AMASMEWGAFRDTLAKKDKYWFYGPLREYAAYIFNGYKSSLNWNCSGTIKYTPPCVGCTN 396
AM + WG+FRD K KYW+ GPL+ AA+ F+ K + +I YT P N
Sbjct: 205 AMTGLRWGSFRDAGVKVSKYWYLGPLKIKAAHFFSTLKEWPQTH-QASISYTGPTERPPN 263
Query: 395 ----CTAKRPEVKRKWF-FVSSTEAAGQLDQTKILNPECLTSKELCFRTCDFKIKTQNVA 231
+RP + R+ ++S A Q ++ ++PE K++ T + I T+N
Sbjct: 264 EPEETPVQRPSLYRRILRRLASYWAQPQDALSQEVSPE--VWKDVQLSTIELSITTRNNQ 321
Query: 230 MN--HQIPALSIFLGRNSYSYTDFVSEGWRRIKTN----SDPEPIFARTIEITPKETDRD 69
++ + L+I + ++ S DF++ G R+++ E + A + E
Sbjct: 322 LDPTSKEDFLNICIEPDTISKGDFITIGSRKVRNPKLHVEGTECLQASQCTLLIPEGAGG 381
Query: 68 TVIEIDKEDFDMKPIKITLMPK 3
+ ID E+++ P+++ L+P+
Sbjct: 382 S-FSIDSEEYEAMPVEVKLLPR 402
>AC099547-1|AAS07537.1| 162|Homo sapiens unknown protein.
Length = 162
Score = 38.7 bits (86), Expect = 0.022
Identities = 19/46 (41%), Positives = 31/46 (67%)
Frame = -1
Query: 755 PLGRTNSIGNTLFPNGKGVQKVKQLITASMAIIKGNTVWKDAMKIE 618
PLG T+S+ +TLF + KV+ + A++AI+KG TV D ++I+
Sbjct: 119 PLGETSSLSHTLF--AESGNKVQHITDATLAIVKGETVPLDVLQIK 162
>U29344-1|AAA73576.1| 2509|Homo sapiens fatty acid synthase protein.
Length = 2509
Score = 34.7 bits (76), Expect = 0.36
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = -1
Query: 557 WGAFRDTLAKKDKYWFYGPLREYAAYIFNGYKSSLNWNCSGTIKYTPPCVGCTNCT 390
WGAFR L ++DK + + + G SS+ W CS P C G CT
Sbjct: 1509 WGAFRHFLLEEDKPE-EPTAHAFVSTLTRGDLSSIRWVCSSLRHAQPTCPGAQLCT 1563
>BC063242-1|AAH63242.1| 2511|Homo sapiens fatty acid synthase protein.
Length = 2511
Score = 34.7 bits (76), Expect = 0.36
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = -1
Query: 557 WGAFRDTLAKKDKYWFYGPLREYAAYIFNGYKSSLNWNCSGTIKYTPPCVGCTNCT 390
WGAFR L ++DK + + + G SS+ W CS P C G CT
Sbjct: 1511 WGAFRHFLLEEDKPE-EPTAHAFVSTLTRGDLSSIRWVCSSLRHAQPTCPGAQLCT 1565
>BC014631-1|AAH14631.1| 774|Homo sapiens FASN protein protein.
Length = 774
Score = 34.7 bits (76), Expect = 0.36
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = -1
Query: 557 WGAFRDTLAKKDKYWFYGPLREYAAYIFNGYKSSLNWNCSGTIKYTPPCVGCTNCT 390
WGAFR L ++DK + + + G SS+ W CS P C G CT
Sbjct: 417 WGAFRHFLLEEDKPE-EPTAHAFVSTLTRGDLSSIRWVCSSLRHAQPTCPGAQLCT 471
>AY451392-1|AAS09886.1| 2511|Homo sapiens fatty acid synthase protein.
Length = 2511
Score = 34.7 bits (76), Expect = 0.36
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = -1
Query: 557 WGAFRDTLAKKDKYWFYGPLREYAAYIFNGYKSSLNWNCSGTIKYTPPCVGCTNCT 390
WGAFR L ++DK + + + G SS+ W CS P C G CT
Sbjct: 1511 WGAFRHFLLEEDKPE-EPTAHAFVSTLTRGDLSSIRWVCSSLRHAQPTCPGAQLCT 1565
>AB209988-1|BAE06070.1| 2548|Homo sapiens FASN variant protein
protein.
Length = 2548
Score = 34.7 bits (76), Expect = 0.36
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = -1
Query: 557 WGAFRDTLAKKDKYWFYGPLREYAAYIFNGYKSSLNWNCSGTIKYTPPCVGCTNCT 390
WGAFR L ++DK + + + G SS+ W CS P C G CT
Sbjct: 1548 WGAFRHFLLEEDKPE-EPTAHAFVSTLTRGDLSSIRWVCSSLRHAQPTCPGAQLCT 1602
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,502,277
Number of Sequences: 237096
Number of extensions: 2569859
Number of successful extensions: 6805
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6796
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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