Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt17e14
         (754 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119018-1|AAM50878.1|  441|Drosophila melanogaster LP04613p pro...   229   2e-60
AE014297-2811|AAF55777.1|  441|Drosophila melanogaster CG10877-P...   229   2e-60
AY121622-1|AAM51949.1|  290|Drosophila melanogaster GH11368p pro...    31   1.7  
AE014134-3277|AAF53919.1|  373|Drosophila melanogaster CG9319-PA...    31   1.7  
AY061131-1|AAL28679.1|  358|Drosophila melanogaster LD11455p pro...    30   3.9  
AE013599-2837|AAF57594.1|  358|Drosophila melanogaster CG7137-PA...    30   3.9  
AY047550-1|AAK77282.1|  255|Drosophila melanogaster GH05949p pro...    29   5.2  
AE014134-1479|AAF52656.1|  255|Drosophila melanogaster CG17294-P...    29   5.2  

>AY119018-1|AAM50878.1|  441|Drosophila melanogaster LP04613p
           protein.
          Length = 441

 Score =  229 bits (561), Expect = 2e-60
 Identities = 109/214 (50%), Positives = 144/214 (67%)
 Frame = -1

Query: 739 LYHRNSTGRGQKIDCNLLSTQISSMINIATIYLNCGVEGQRWGTAHANLVPYQAFKTKDG 560
           LY R  T RGQKI+ +LLST  S ++N+ + YLN GVE  R GTAH+++VPYQ+FKTKDG
Sbjct: 228 LYQRTRTQRGQKIEVDLLSTCCSLLLNVGSNYLNSGVEAGRMGTAHSSIVPYQSFKTKDG 287

Query: 559 YMVIGTGSNPQFADFCKLINREDLITDERFKDNSNRVENRDEXXXXXXXXXXXXXSREWS 380
           Y+ +GTGS+ QF D C+ +  E L  + +FK N +RV NR E             SR W 
Sbjct: 288 YLTLGTGSDVQFVDLCRRLKVEHLAQNPKFKTNKDRVTNRVELLGILEQMLSEDTSRNWM 347

Query: 379 ALFKDATFPNGPINTMKDVFDDEHVKEIGLVKELQHTSAGTLKVVGPPTEFSEGGNLART 200
            LF+ A+FP GP+N++ +VF+DEH+K IGLVK L+H    T+KVVGPP  FSE  N ART
Sbjct: 348 KLFEGASFPVGPVNSIPEVFEDEHIKAIGLVKSLRHPKDETVKVVGPPVTFSEARNDART 407

Query: 199 APPTLGQHTTDILSDFLGYHESKIQGLFEKNIIR 98
           APP LGQHT ++L + LGY   ++  L + NII+
Sbjct: 408 APPILGQHTDEVLGELLGYGPDELAKLKKDNIIQ 441


>AE014297-2811|AAF55777.1|  441|Drosophila melanogaster CG10877-PA
           protein.
          Length = 441

 Score =  229 bits (561), Expect = 2e-60
 Identities = 109/214 (50%), Positives = 144/214 (67%)
 Frame = -1

Query: 739 LYHRNSTGRGQKIDCNLLSTQISSMINIATIYLNCGVEGQRWGTAHANLVPYQAFKTKDG 560
           LY R  T RGQKI+ +LLST  S ++N+ + YLN GVE  R GTAH+++VPYQ+FKTKDG
Sbjct: 228 LYQRTRTQRGQKIEVDLLSTCCSLLLNVGSNYLNSGVEAGRMGTAHSSIVPYQSFKTKDG 287

Query: 559 YMVIGTGSNPQFADFCKLINREDLITDERFKDNSNRVENRDEXXXXXXXXXXXXXSREWS 380
           Y+ +GTGS+ QF D C+ +  E L  + +FK N +RV NR E             SR W 
Sbjct: 288 YLTLGTGSDVQFVDLCRRLKVEHLAQNPKFKTNKDRVTNRVELLGILEQMLSEDTSRNWM 347

Query: 379 ALFKDATFPNGPINTMKDVFDDEHVKEIGLVKELQHTSAGTLKVVGPPTEFSEGGNLART 200
            LF+ A+FP GP+N++ +VF+DEH+K IGLVK L+H    T+KVVGPP  FSE  N ART
Sbjct: 348 KLFEGASFPVGPVNSIPEVFEDEHIKAIGLVKSLRHPKDETVKVVGPPVTFSEARNDART 407

Query: 199 APPTLGQHTTDILSDFLGYHESKIQGLFEKNIIR 98
           APP LGQHT ++L + LGY   ++  L + NII+
Sbjct: 408 APPILGQHTDEVLGELLGYGPDELAKLKKDNIIQ 441


>AY121622-1|AAM51949.1|  290|Drosophila melanogaster GH11368p
           protein.
          Length = 290

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 3/147 (2%)
 Frame = -1

Query: 739 LYHRNSTGRGQKIDCNLL--STQISSMINIATIYLNCGVEGQRWGTAHANLVPYQAFKTK 566
           L  R+ +G+GQ +D +++  +  ++S + ++   +  G E +           Y  ++TK
Sbjct: 84  LLERHRSGKGQVVDASMVEGAAYVASWLFMSRNLVIWGRE-RGDNLVDGGSFFYDTYETK 142

Query: 565 DG-YMVIGTGSNPQFADFCKLINREDLITDERFKDNSNRVENRDEXXXXXXXXXXXXXSR 389
           DG YM +G    PQF +  K   R +L  D       ++V  R                 
Sbjct: 143 DGRYMSVG-ALEPQFFEMLK--QRLELPEDVSQFGEEHQVRGR----KLLTEAFLSKTQA 195

Query: 388 EWSALFKDATFPNGPINTMKDVFDDEH 308
           EWS +F+D      P+   ++V   +H
Sbjct: 196 EWSQIFEDVDACVYPVLDYREVHRHDH 222


>AE014134-3277|AAF53919.1|  373|Drosophila melanogaster CG9319-PA
           protein.
          Length = 373

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 3/147 (2%)
 Frame = -1

Query: 739 LYHRNSTGRGQKIDCNLL--STQISSMINIATIYLNCGVEGQRWGTAHANLVPYQAFKTK 566
           L  R+ +G+GQ +D +++  +  ++S + ++   +  G E +           Y  ++TK
Sbjct: 167 LLERHRSGKGQVVDASMVEGAAYVASWLFMSRNLVIWGRE-RGDNLVDGGSFFYDTYETK 225

Query: 565 DG-YMVIGTGSNPQFADFCKLINREDLITDERFKDNSNRVENRDEXXXXXXXXXXXXXSR 389
           DG YM +G    PQF +  K   R +L  D       ++V  R                 
Sbjct: 226 DGRYMSVG-ALEPQFFEMLK--QRLELPEDVSQFGEEHQVRGR----KLLTEAFLSKTQA 278

Query: 388 EWSALFKDATFPNGPINTMKDVFDDEH 308
           EWS +F+D      P+   ++V   +H
Sbjct: 279 EWSQIFEDVDACVYPVLDYREVHRHDH 305


>AY061131-1|AAL28679.1|  358|Drosophila melanogaster LD11455p
           protein.
          Length = 358

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 14/57 (24%), Positives = 27/57 (47%)
 Frame = -1

Query: 349 GPINTMKDVFDDEHVKEIGLVKELQHTSAGTLKVVGPPTEFSEGGNLARTAPPTLGQ 179
           GP+   +D  DD++      ++ +    +G ++   PPT+ ++GG       P L Q
Sbjct: 67  GPLAPPQDSSDDDYEDVEDGIRAMHKVKSGRIEKQRPPTQATKGGKKELKLKPELAQ 123


>AE013599-2837|AAF57594.1|  358|Drosophila melanogaster CG7137-PA
           protein.
          Length = 358

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 14/57 (24%), Positives = 27/57 (47%)
 Frame = -1

Query: 349 GPINTMKDVFDDEHVKEIGLVKELQHTSAGTLKVVGPPTEFSEGGNLARTAPPTLGQ 179
           GP+   +D  DD++      ++ +    +G ++   PPT+ ++GG       P L Q
Sbjct: 67  GPLAPPQDSSDDDYEDVEDGIRAMHKVKSGRIEKQRPPTQATKGGKKELKLKPELAQ 123


>AY047550-1|AAK77282.1|  255|Drosophila melanogaster GH05949p
           protein.
          Length = 255

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 18/60 (30%), Positives = 26/60 (43%)
 Frame = -1

Query: 289 VKELQHTSAGTLKVVGPPTEFSEGGNLARTAPPTLGQHTTDILSDFLGYHESKIQGLFEK 110
           VK L+  +  T KV+G P  +   G LA   P +      D   D +G     +QG+  K
Sbjct: 162 VKGLEFATGRTAKVIGKPNPYFFEGALAGRDPASCVMIGDDANDDIVGAMSMGMQGILVK 221


>AE014134-1479|AAF52656.1|  255|Drosophila melanogaster CG17294-PA
           protein.
          Length = 255

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 18/60 (30%), Positives = 26/60 (43%)
 Frame = -1

Query: 289 VKELQHTSAGTLKVVGPPTEFSEGGNLARTAPPTLGQHTTDILSDFLGYHESKIQGLFEK 110
           VK L+  +  T KV+G P  +   G LA   P +      D   D +G     +QG+  K
Sbjct: 162 VKGLEFATGRTAKVIGKPNPYFFEGALAGRDPASCVMIGDDANDDIVGAMSMGMQGILVK 221


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,076,004
Number of Sequences: 53049
Number of extensions: 694287
Number of successful extensions: 1637
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1635
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)