Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17e11
(811 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC101061-1|AAI01062.1| 352|Homo sapiens C3orf23 protein protein. 88 4e-17
BC101060-1|AAI01061.1| 496|Homo sapiens chromosome 3 open readi... 88 4e-17
BC101059-1|AAI01060.1| 352|Homo sapiens C3orf23 protein protein. 88 4e-17
BC047231-1|AAH47231.1| 352|Homo sapiens C3orf23 protein protein. 88 4e-17
AL832473-1|CAD38627.1| 496|Homo sapiens hypothetical protein pr... 88 4e-17
BC151232-1|AAI51233.1| 2533|Homo sapiens KIAA0467 protein. 35 0.40
AL583862-1|CAI14886.1| 2102|Homo sapiens KIAA0467 protein. 35 0.40
AB007936-1|BAA32312.2| 2687|Homo sapiens KIAA0467 protein protein. 35 0.40
BX248516-10|CAI41923.2| 197|Homo sapiens HLA-B associated trans... 31 6.5
BX001040-9|CAI18636.1| 177|Homo sapiens HLA-B associated transc... 31 6.5
AL662847-27|CAO72089.1| 197|Homo sapiens HLA-B associated trans... 31 6.5
AL662801-10|CAI18285.2| 197|Homo sapiens HLA-B associated trans... 31 6.5
U04810-1|AAA79333.2| 778|Homo sapiens tastin protein. 30 8.6
BC032583-1|AAH32583.1| 778|Homo sapiens trophinin associated pr... 30 8.6
>BC101061-1|AAI01062.1| 352|Homo sapiens C3orf23 protein protein.
Length = 352
Score = 87.8 bits (208), Expect = 4e-17
Identities = 68/254 (26%), Positives = 117/254 (46%), Gaps = 1/254 (0%)
Frame = -2
Query: 807 LQSLVSLATQHSNIMDNLQGRTIALGQFTGVSLDGDVYLNIIDVRNEWLSLIKKVRQEDS 628
L SL LA Q+ + +G TI +G+S G V L +DV + W L +++
Sbjct: 102 LHSLSRLAQQNLETLKKAKGCTIIFTDRSGMSAVGHVMLGTMDVHHHWTKLFERLPSYFD 161
Query: 627 ALTMIPSYEKALSSILRDIHIRRRKFMPKVSAALYCSHLRQLITSIGDFYGRGNKFPPSV 448
+ E +S +L I + ++ ++ L L + + + FY R K
Sbjct: 162 LQRRLMILEDQISYLLGGIQV---VYIEELQPVLT---LEEYYSLLDVFYNRLLKSRILF 215
Query: 447 -PESLSKYEIVVEPEAGPLMVSPTGQFITPSSCPADELIAYINNHLDEATLLLTEYSINK 271
P SL ++++ + + G F P+ C L +I +A + K
Sbjct: 216 HPRSLRGLQMILNSDRYAPSLHELGHFNIPTLCDPANLQWFILTKAQQARENMKRKEELK 275
Query: 270 HVEKALHKEVKERFGLLELHKDDSITPGLMISCCQRLLTRTDKLNANLRGNILYVTHYYS 91
+E L + ++F L +L+K+ SI+ M+ CC+RLL ++ L G L ++H+YS
Sbjct: 276 VIENELIQASTKKFSLEKLYKEPSISSIQMVDCCKRLL---EQSLPYLHGMHLCISHFYS 332
Query: 90 VLTEGILCIPWNFK 49
V+ +G LCIPWN+K
Sbjct: 333 VMQDGDLCIPWNWK 346
>BC101060-1|AAI01061.1| 496|Homo sapiens chromosome 3 open reading
frame 23 protein.
Length = 496
Score = 87.8 bits (208), Expect = 4e-17
Identities = 68/254 (26%), Positives = 117/254 (46%), Gaps = 1/254 (0%)
Frame = -2
Query: 807 LQSLVSLATQHSNIMDNLQGRTIALGQFTGVSLDGDVYLNIIDVRNEWLSLIKKVRQEDS 628
L SL LA Q+ + +G TI +G+S G V L +DV + W L +++
Sbjct: 246 LHSLSRLAQQNLETLKKAKGCTIIFTDRSGMSAVGHVMLGTMDVHHHWTKLFERLPSYFD 305
Query: 627 ALTMIPSYEKALSSILRDIHIRRRKFMPKVSAALYCSHLRQLITSIGDFYGRGNKFPPSV 448
+ E +S +L I + ++ ++ L L + + + FY R K
Sbjct: 306 LQRRLMILEDQISYLLGGIQV---VYIEELQPVLT---LEEYYSLLDVFYNRLLKSRILF 359
Query: 447 -PESLSKYEIVVEPEAGPLMVSPTGQFITPSSCPADELIAYINNHLDEATLLLTEYSINK 271
P SL ++++ + + G F P+ C L +I +A + K
Sbjct: 360 HPRSLRGLQMILNSDRYAPSLHELGHFNIPTLCDPANLQWFILTKAQQARENMKRKEELK 419
Query: 270 HVEKALHKEVKERFGLLELHKDDSITPGLMISCCQRLLTRTDKLNANLRGNILYVTHYYS 91
+E L + ++F L +L+K+ SI+ M+ CC+RLL ++ L G L ++H+YS
Sbjct: 420 VIENELIQASTKKFSLEKLYKEPSISSIQMVDCCKRLL---EQSLPYLHGMHLCISHFYS 476
Query: 90 VLTEGILCIPWNFK 49
V+ +G LCIPWN+K
Sbjct: 477 VMQDGDLCIPWNWK 490
>BC101059-1|AAI01060.1| 352|Homo sapiens C3orf23 protein protein.
Length = 352
Score = 87.8 bits (208), Expect = 4e-17
Identities = 68/254 (26%), Positives = 117/254 (46%), Gaps = 1/254 (0%)
Frame = -2
Query: 807 LQSLVSLATQHSNIMDNLQGRTIALGQFTGVSLDGDVYLNIIDVRNEWLSLIKKVRQEDS 628
L SL LA Q+ + +G TI +G+S G V L +DV + W L +++
Sbjct: 102 LHSLSRLAQQNLETLKKAKGCTIIFTDRSGMSAVGHVMLGTMDVHHHWTKLFERLPSYFD 161
Query: 627 ALTMIPSYEKALSSILRDIHIRRRKFMPKVSAALYCSHLRQLITSIGDFYGRGNKFPPSV 448
+ E +S +L I + ++ ++ L L + + + FY R K
Sbjct: 162 LQRRLMILEDQISYLLGGIQV---VYIEELQPVLT---LEEYYSLLDVFYNRLLKSRILF 215
Query: 447 -PESLSKYEIVVEPEAGPLMVSPTGQFITPSSCPADELIAYINNHLDEATLLLTEYSINK 271
P SL ++++ + + G F P+ C L +I +A + K
Sbjct: 216 HPRSLRGLQMILNSDRYAPSLHELGHFNIPTLCDPANLQWFILTKAQQARENMKRKEELK 275
Query: 270 HVEKALHKEVKERFGLLELHKDDSITPGLMISCCQRLLTRTDKLNANLRGNILYVTHYYS 91
+E L + ++F L +L+K+ SI+ M+ CC+RLL ++ L G L ++H+YS
Sbjct: 276 VIENELIQASTKKFSLEKLYKEPSISSIQMVDCCKRLL---EQSLPYLHGMHLCISHFYS 332
Query: 90 VLTEGILCIPWNFK 49
V+ +G LCIPWN+K
Sbjct: 333 VMQDGDLCIPWNWK 346
>BC047231-1|AAH47231.1| 352|Homo sapiens C3orf23 protein protein.
Length = 352
Score = 87.8 bits (208), Expect = 4e-17
Identities = 68/254 (26%), Positives = 117/254 (46%), Gaps = 1/254 (0%)
Frame = -2
Query: 807 LQSLVSLATQHSNIMDNLQGRTIALGQFTGVSLDGDVYLNIIDVRNEWLSLIKKVRQEDS 628
L SL LA Q+ + +G TI +G+S G V L +DV + W L +++
Sbjct: 102 LHSLSRLAQQNLETLKKAKGCTIIFTDRSGMSAVGHVMLGTMDVHHHWTKLFERLPSYFD 161
Query: 627 ALTMIPSYEKALSSILRDIHIRRRKFMPKVSAALYCSHLRQLITSIGDFYGRGNKFPPSV 448
+ E +S +L I + ++ ++ L L + + + FY R K
Sbjct: 162 LQRRLMILEDQISYLLGGIQV---VYIEELQPVLT---LEEYYSLLDVFYNRLLKSRILF 215
Query: 447 -PESLSKYEIVVEPEAGPLMVSPTGQFITPSSCPADELIAYINNHLDEATLLLTEYSINK 271
P SL ++++ + + G F P+ C L +I +A + K
Sbjct: 216 HPRSLRGLQMILNSDRYAPSLHELGHFNIPTLCDPANLQWFILTKAQQARENMKRKEELK 275
Query: 270 HVEKALHKEVKERFGLLELHKDDSITPGLMISCCQRLLTRTDKLNANLRGNILYVTHYYS 91
+E L + ++F L +L+K+ SI+ M+ CC+RLL ++ L G L ++H+YS
Sbjct: 276 VIENELIQASTKKFSLEKLYKEPSISSIQMVDCCKRLL---EQSLPYLHGMHLCISHFYS 332
Query: 90 VLTEGILCIPWNFK 49
V+ +G LCIPWN+K
Sbjct: 333 VMQDGDLCIPWNWK 346
>AL832473-1|CAD38627.1| 496|Homo sapiens hypothetical protein
protein.
Length = 496
Score = 87.8 bits (208), Expect = 4e-17
Identities = 68/254 (26%), Positives = 117/254 (46%), Gaps = 1/254 (0%)
Frame = -2
Query: 807 LQSLVSLATQHSNIMDNLQGRTIALGQFTGVSLDGDVYLNIIDVRNEWLSLIKKVRQEDS 628
L SL LA Q+ + +G TI +G+S G V L +DV + W L +++
Sbjct: 246 LHSLSRLAQQNLETLKKAKGCTIIFTDRSGMSAVGHVMLGTMDVHHHWTKLFERLPSYFD 305
Query: 627 ALTMIPSYEKALSSILRDIHIRRRKFMPKVSAALYCSHLRQLITSIGDFYGRGNKFPPSV 448
+ E +S +L I + ++ ++ L L + + + FY R K
Sbjct: 306 LQRRLMILEDQISYLLGGIQV---VYIEELQPVLT---LEEYYSLLDVFYNRLLKSRILF 359
Query: 447 -PESLSKYEIVVEPEAGPLMVSPTGQFITPSSCPADELIAYINNHLDEATLLLTEYSINK 271
P SL ++++ + + G F P+ C L +I +A + K
Sbjct: 360 HPRSLRGLQMILNSDRYAPSLHELGHFNIPTLCDPANLQWFILTKAQQARENMKRKEELK 419
Query: 270 HVEKALHKEVKERFGLLELHKDDSITPGLMISCCQRLLTRTDKLNANLRGNILYVTHYYS 91
+E L + ++F L +L+K+ SI+ M+ CC+RLL ++ L G L ++H+YS
Sbjct: 420 VIENELIQASTKKFSLEKLYKEPSISSIQMVDCCKRLL---EQSLPYLHGMHLCISHFYS 476
Query: 90 VLTEGILCIPWNFK 49
V+ +G LCIPWN+K
Sbjct: 477 VMQDGDLCIPWNWK 490
>BC151232-1|AAI51233.1| 2533|Homo sapiens KIAA0467 protein.
Length = 2533
Score = 34.7 bits (76), Expect = 0.40
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Frame = -2
Query: 600 KALSSILRDIHIRRRK----FMPKVSAALYCSHLRQLITSIGDFYGRGNKFPPSVPESLS 433
+AL S+L + RK + + + A+Y +LR L TS D +G+ PPS+ S S
Sbjct: 1166 QALRSVLNAFSVVNRKNMFVYQERATKAVY--YLRLLETSCSDRPWKGDALPPSLALSRS 1223
Query: 432 KYEIVVEPEAGPLMVSPTGQFITPSSCPADELIAYINNHL 313
+ I E +GP SP ++ S A + ++ H+
Sbjct: 1224 QEPIYSEEASGPR--SPL-DMVSSRSSDAARPVGQVDRHI 1260
>AL583862-1|CAI14886.1| 2102|Homo sapiens KIAA0467 protein.
Length = 2102
Score = 34.7 bits (76), Expect = 0.40
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Frame = -2
Query: 600 KALSSILRDIHIRRRK----FMPKVSAALYCSHLRQLITSIGDFYGRGNKFPPSVPESLS 433
+AL S+L + RK + + + A+Y +LR L TS D +G+ PPS+ S S
Sbjct: 694 QALRSVLNAFSVVNRKNMFVYQERATKAVY--YLRLLETSCSDRPWKGDALPPSLALSRS 751
Query: 432 KYEIVVEPEAGPLMVSPTGQFITPSSCPADELIAYINNHL 313
+ I E +GP SP ++ S A + ++ H+
Sbjct: 752 QEPIYSEEASGPR--SPL-DMVSSRSSDAARPVGQVDRHI 788
>AB007936-1|BAA32312.2| 2687|Homo sapiens KIAA0467 protein protein.
Length = 2687
Score = 34.7 bits (76), Expect = 0.40
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Frame = -2
Query: 600 KALSSILRDIHIRRRK----FMPKVSAALYCSHLRQLITSIGDFYGRGNKFPPSVPESLS 433
+AL S+L + RK + + + A+Y +LR L TS D +G+ PPS+ S S
Sbjct: 1320 QALRSVLNAFSVVNRKNMFVYQERATKAVY--YLRLLETSCSDRPWKGDALPPSLALSRS 1377
Query: 432 KYEIVVEPEAGPLMVSPTGQFITPSSCPADELIAYINNHL 313
+ I E +GP SP ++ S A + ++ H+
Sbjct: 1378 QEPIYSEEASGPR--SPL-DMVSSRSSDAARPVGQVDRHI 1414
>BX248516-10|CAI41923.2| 197|Homo sapiens HLA-B associated
transcript 1 protein.
Length = 197
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 552 FMPKVSAALYCSHLRQLITSIGDFYGRGNKFPPSV 448
F+PKVS + C H R+L I Y R +K+ P+V
Sbjct: 138 FLPKVSVLVMC-HTRELAFQISKEYERFSKYMPNV 171
>BX001040-9|CAI18636.1| 177|Homo sapiens HLA-B associated
transcript 1 protein.
Length = 177
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 552 FMPKVSAALYCSHLRQLITSIGDFYGRGNKFPPSV 448
F+PKVS + C H R+L I Y R +K+ P+V
Sbjct: 138 FLPKVSVLVMC-HTRELAFQISKEYERFSKYMPNV 171
>AL662847-27|CAO72089.1| 197|Homo sapiens HLA-B associated
transcript 1 protein.
Length = 197
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 552 FMPKVSAALYCSHLRQLITSIGDFYGRGNKFPPSV 448
F+PKVS + C H R+L I Y R +K+ P+V
Sbjct: 138 FLPKVSVLVMC-HTRELAFQISKEYERFSKYMPNV 171
>AL662801-10|CAI18285.2| 197|Homo sapiens HLA-B associated
transcript 1 protein.
Length = 197
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 552 FMPKVSAALYCSHLRQLITSIGDFYGRGNKFPPSV 448
F+PKVS + C H R+L I Y R +K+ P+V
Sbjct: 138 FLPKVSVLVMC-HTRELAFQISKEYERFSKYMPNV 171
>U04810-1|AAA79333.2| 778|Homo sapiens tastin protein.
Length = 778
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = -2
Query: 465 KFPPSVPESLSKYEIVV-EP----EAGPLMVSPTGQFITPSSCPADEL 337
+ P +PES + ++ V EP E GPL S GQ P CP EL
Sbjct: 594 RIEPEIPESSRQEQLEVPEPCPPAEPGPLQPSTQGQSGPPGPCPRVEL 641
>BC032583-1|AAH32583.1| 778|Homo sapiens trophinin associated
protein (tastin) protein.
Length = 778
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = -2
Query: 465 KFPPSVPESLSKYEIVV-EP----EAGPLMVSPTGQFITPSSCPADEL 337
+ P +PES + ++ V EP E GPL S GQ P CP EL
Sbjct: 594 RIEPEIPESSRQEQLEVPEPCPPAEPGPLQPSTQGQSGPPGPCPRVEL 641
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,662,870
Number of Sequences: 237096
Number of extensions: 2049001
Number of successful extensions: 4905
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4900
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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