Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17e09
(727 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15805-1|CAA33804.1| 844|Drosophila melanogaster protein ( Dros... 365 e-101
AY075481-1|AAL68292.1| 844|Drosophila melanogaster RE38659p pro... 365 e-101
AE014134-3534|AAN11135.1| 832|Drosophila melanogaster CG2238-PC... 365 e-101
AE014134-3533|AAG22125.2| 832|Drosophila melanogaster CG2238-PB... 365 e-101
AE014134-3532|AAF57226.2| 844|Drosophila melanogaster CG2238-PA... 365 e-101
AY089551-1|AAL90289.1| 975|Drosophila melanogaster LD28793p pro... 188 5e-48
AE014297-4212|AAF56769.1| 975|Drosophila melanogaster CG4849-PA... 188 5e-48
AY058769-1|AAL13998.1| 949|Drosophila melanogaster SD04694p pro... 92 8e-19
AE014296-2740|AAF49461.3| 1033|Drosophila melanogaster CG33158-P... 92 8e-19
AE014134-1251|AAF52495.2| 745|Drosophila melanogaster CG4567-PA... 59 7e-09
AE014297-3196|AAF56031.2| 692|Drosophila melanogaster CG31159-P... 46 4e-05
X70644-1|CAA49989.1| 847|Drosophila melanogaster histidine deca... 30 2.8
AE013599-1049|AAF58823.1| 847|Drosophila melanogaster CG3454-PA... 30 2.8
AF533773-1|AAN04479.1| 539|Drosophila melanogaster Wnt4 protein... 29 8.5
>X15805-1|CAA33804.1| 844|Drosophila melanogaster protein (
Drosophila DMEF2 genefor the translation elongation
factor 2. ).
Length = 844
Score = 365 bits (898), Expect = e-101
Identities = 163/180 (90%), Positives = 173/180 (96%)
Frame = -2
Query: 726 QYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCL 547
QYLNEIKDSVVAGFQWA+KEG++A+ENLRGVRFNIYDVTLH DAIHRGGGQIIPTTRRCL
Sbjct: 656 QYLNEIKDSVVAGFQWASKEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCL 715
Query: 546 YACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLP 367
YA +TA+PRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEE+QV GTPMF+VKAYLP
Sbjct: 716 YAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLP 775
Query: 366 VNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLP 187
VNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP EP SKPY +VQ+TRKRKGLKEGLP
Sbjct: 776 VNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLP 835
>AY075481-1|AAL68292.1| 844|Drosophila melanogaster RE38659p protein.
Length = 844
Score = 365 bits (898), Expect = e-101
Identities = 163/180 (90%), Positives = 173/180 (96%)
Frame = -2
Query: 726 QYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCL 547
QYLNEIKDSVVAGFQWA+KEG++A+ENLRGVRFNIYDVTLH DAIHRGGGQIIPTTRRCL
Sbjct: 656 QYLNEIKDSVVAGFQWASKEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCL 715
Query: 546 YACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLP 367
YA +TA+PRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEE+QV GTPMF+VKAYLP
Sbjct: 716 YAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLP 775
Query: 366 VNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLP 187
VNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP EP SKPY +VQ+TRKRKGLKEGLP
Sbjct: 776 VNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLP 835
>AE014134-3534|AAN11135.1| 832|Drosophila melanogaster CG2238-PC,
isoform C protein.
Length = 832
Score = 365 bits (898), Expect = e-101
Identities = 163/180 (90%), Positives = 173/180 (96%)
Frame = -2
Query: 726 QYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCL 547
QYLNEIKDSVVAGFQWA+KEG++A+ENLRGVRFNIYDVTLH DAIHRGGGQIIPTTRRCL
Sbjct: 644 QYLNEIKDSVVAGFQWASKEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCL 703
Query: 546 YACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLP 367
YA +TA+PRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEE+QV GTPMF+VKAYLP
Sbjct: 704 YAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLP 763
Query: 366 VNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLP 187
VNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP EP SKPY +VQ+TRKRKGLKEGLP
Sbjct: 764 VNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLP 823
>AE014134-3533|AAG22125.2| 832|Drosophila melanogaster CG2238-PB,
isoform B protein.
Length = 832
Score = 365 bits (898), Expect = e-101
Identities = 163/180 (90%), Positives = 173/180 (96%)
Frame = -2
Query: 726 QYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCL 547
QYLNEIKDSVVAGFQWA+KEG++A+ENLRGVRFNIYDVTLH DAIHRGGGQIIPTTRRCL
Sbjct: 644 QYLNEIKDSVVAGFQWASKEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCL 703
Query: 546 YACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLP 367
YA +TA+PRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEE+QV GTPMF+VKAYLP
Sbjct: 704 YAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLP 763
Query: 366 VNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLP 187
VNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP EP SKPY +VQ+TRKRKGLKEGLP
Sbjct: 764 VNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLP 823
>AE014134-3532|AAF57226.2| 844|Drosophila melanogaster CG2238-PA,
isoform A protein.
Length = 844
Score = 365 bits (898), Expect = e-101
Identities = 163/180 (90%), Positives = 173/180 (96%)
Frame = -2
Query: 726 QYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCL 547
QYLNEIKDSVVAGFQWA+KEG++A+ENLRGVRFNIYDVTLH DAIHRGGGQIIPTTRRCL
Sbjct: 656 QYLNEIKDSVVAGFQWASKEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCL 715
Query: 546 YACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLP 367
YA +TA+PRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEE+QV GTPMF+VKAYLP
Sbjct: 716 YAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLP 775
Query: 366 VNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLP 187
VNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP EP SKPY +VQ+TRKRKGLKEGLP
Sbjct: 776 VNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLP 835
>AY089551-1|AAL90289.1| 975|Drosophila melanogaster LD28793p protein.
Length = 975
Score = 188 bits (459), Expect = 5e-48
Identities = 90/187 (48%), Positives = 121/187 (64%), Gaps = 12/187 (6%)
Frame = -2
Query: 720 LNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYA 541
L +KDS+V GFQW +EG + EE +R V+F I D + +A+HRGGGQIIPT RR Y+
Sbjct: 762 LTAVKDSIVQGFQWGTREGPLCEEPIRNVKFKILDGVIANEALHRGGGQIIPTARRVAYS 821
Query: 540 CLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVN 361
L A PRLMEP E+Q P V +Y VL RRRGHV +++ V+G+P++ +KA++P
Sbjct: 822 AFLMATPRLMEPYLFVEVQAPADCVSAVYTVLARRRGHVTQDAPVSGSPIYTIKAFIPAI 881
Query: 360 ESFGFTADLRSNTGGQAFPQCVFDHWQVLPGD---------PCEPQSKPY---NVVQETR 217
+SFGF DLR++T GQAF VF HWQ++PGD P EPQ + + +TR
Sbjct: 882 DSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDKSIIIRPLEPQQASHLAREFMIKTR 941
Query: 216 KRKGLKE 196
+RKGL E
Sbjct: 942 RRKGLSE 948
>AE014297-4212|AAF56769.1| 975|Drosophila melanogaster CG4849-PA
protein.
Length = 975
Score = 188 bits (459), Expect = 5e-48
Identities = 90/187 (48%), Positives = 121/187 (64%), Gaps = 12/187 (6%)
Frame = -2
Query: 720 LNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYA 541
L +KDS+V GFQW +EG + EE +R V+F I D + +A+HRGGGQIIPT RR Y+
Sbjct: 762 LTAVKDSIVQGFQWGTREGPLCEEPIRNVKFKILDGVIANEALHRGGGQIIPTARRVAYS 821
Query: 540 CLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVN 361
L A PRLMEP E+Q P V +Y VL RRRGHV +++ V+G+P++ +KA++P
Sbjct: 822 AFLMATPRLMEPYLFVEVQAPADCVSAVYTVLARRRGHVTQDAPVSGSPIYTIKAFIPAI 881
Query: 360 ESFGFTADLRSNTGGQAFPQCVFDHWQVLPGD---------PCEPQSKPY---NVVQETR 217
+SFGF DLR++T GQAF VF HWQ++PGD P EPQ + + +TR
Sbjct: 882 DSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDKSIIIRPLEPQQASHLAREFMIKTR 941
Query: 216 KRKGLKE 196
+RKGL E
Sbjct: 942 RRKGLSE 948
>AY058769-1|AAL13998.1| 949|Drosophila melanogaster SD04694p protein.
Length = 949
Score = 91.9 bits (218), Expect = 8e-19
Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Frame = -2
Query: 714 EIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHT---DAIHRG--GGQIIPTTRRC 550
+ S+V GFQ + G + EE ++GV F + + ++ + D RG GQ++ +
Sbjct: 738 DFNSSLVNGFQITSVAGPLCEEPMQGVCFAVLEWSIQSEGEDLNSRGPFSGQVLTAAKEV 797
Query: 549 LYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYL 370
RL+ P+Y C I +G +Y V+ RR G + G+ F V L
Sbjct: 798 CRQAFQNQPQRLVTPMYSCNIVVNAEMLGKMYAVIGRRHGKILSGDLTQGSGNFAVTCLL 857
Query: 369 PVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP 262
PV ESF F ++R T G A PQ +F HW+V+ DP
Sbjct: 858 PVIESFNFAQEMRKQTSGLACPQLMFSHWEVIDIDP 893
>AE014296-2740|AAF49461.3| 1033|Drosophila melanogaster CG33158-PB
protein.
Length = 1033
Score = 91.9 bits (218), Expect = 8e-19
Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Frame = -2
Query: 714 EIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHT---DAIHRG--GGQIIPTTRRC 550
+ S+V GFQ + G + EE ++GV F + + ++ + D RG GQ++ +
Sbjct: 822 DFNSSLVNGFQITSVAGPLCEEPMQGVCFAVLEWSIQSEGEDLNSRGPFSGQVLTAAKEV 881
Query: 549 LYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYL 370
RL+ P+Y C I +G +Y V+ RR G + G+ F V L
Sbjct: 882 CRQAFQNQPQRLVTPMYSCNIVVNAEMLGKMYAVIGRRHGKILSGDLTQGSGNFAVTCLL 941
Query: 369 PVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP 262
PV ESF F ++R T G A PQ +F HW+V+ DP
Sbjct: 942 PVIESFNFAQEMRKQTSGLACPQLMFSHWEVIDIDP 977
>AE014134-1251|AAF52495.2| 745|Drosophila melanogaster CG4567-PA
protein.
Length = 745
Score = 58.8 bits (136), Expect = 7e-09
Identities = 40/168 (23%), Positives = 78/168 (46%)
Frame = -2
Query: 699 VVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQP 520
V G++ A++G+++ L G+RF + D H + + +
Sbjct: 580 VEKGYREMAEKGMLSGHKLSGIRFRLQDGGHHI--VDSSELAFMLAAHGAIKEVFQNGSW 637
Query: 519 RLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTA 340
+++EP+ L E+ PE G + G L++R G + G F V A +P+N+ FG+
Sbjct: 638 QILEPIMLVEVTAPEEFQGAVMGHLSKRHGIITGTEGTEG--WFTVYAEVPLNDMFGYAG 695
Query: 339 DLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKE 196
+LRS+T G+ + + PC P + +V++ ++ +GL +
Sbjct: 696 ELRSSTQGKGEFTMEYSRY-----SPCLPDVQD-QIVRQYQESQGLAQ 737
>AE014297-3196|AAF56031.2| 692|Drosophila melanogaster CG31159-PA
protein.
Length = 692
Score = 46.4 bits (105), Expect = 4e-05
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = -2
Query: 615 VTLHTDAIHRGGGQ--IIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLN 442
+ LH I RG ++ T +C+ L T+ RL+EP+ +I P + GI L+
Sbjct: 562 IRLHNATIGRGTADSFVMATAAQCVQKLLSTSGTRLLEPIMALQIVAPSERISGIMADLS 621
Query: 441 RRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQA 310
RRR + + G ++ P+ E G+++ LR+ + G A
Sbjct: 622 RRRA-LINDVLPKGERNKMILVNAPLAELSGYSSALRTISSGTA 664
>X70644-1|CAA49989.1| 847|Drosophila melanogaster histidine
decarboxylase protein.
Length = 847
Score = 30.3 bits (65), Expect = 2.8
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Frame = -2
Query: 690 GFQWAAKEGVMAEE----NLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQ 523
GF WA+ E N G + D LH + +GGG + T CLL +
Sbjct: 102 GFTWASSPACTELEIIVMNWLGKMIGLPDAFLHLSSQSQGGGVLQTTASEATLVCLLAGR 161
Query: 522 PRLME 508
R ++
Sbjct: 162 TRAIQ 166
>AE013599-1049|AAF58823.1| 847|Drosophila melanogaster CG3454-PA
protein.
Length = 847
Score = 30.3 bits (65), Expect = 2.8
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Frame = -2
Query: 690 GFQWAAKEGVMAEE----NLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQ 523
GF WA+ E N G + D LH + +GGG + T CLL +
Sbjct: 102 GFTWASSPACTELEIIVMNWLGKMIGLPDAFLHLSSQSQGGGVLQTTASEATLVCLLAGR 161
Query: 522 PRLME 508
R ++
Sbjct: 162 TRAIQ 166
>AF533773-1|AAN04479.1| 539|Drosophila melanogaster Wnt4 protein
protein.
Length = 539
Score = 28.7 bits (61), Expect = 8.5
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 310 GLSAGVGTQIGSKTERLIDR*VGLHNEHRCTCH 408
G +AG+G +IGS T + D GL+NEH + H
Sbjct: 193 GGAAGMGLRIGSNTNNM-DMQQGLYNEHFISEH 224
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,294,104
Number of Sequences: 53049
Number of extensions: 785595
Number of successful extensions: 2077
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2076
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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