Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt17e07
(756 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0936 - 12528336-12528379,12528516-12528602,12528696-125288... 237 9e-63
05_05_0202 - 23211342-23211385,23211493-23211579,23211666-232117... 231 6e-61
03_01_0509 + 3836284-3836547,3836927-3837157,3837253-3837423,383... 223 1e-58
05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475 107 7e-24
03_05_0467 - 24615243-24615384,24619166-24619450,24619516-246195... 98 6e-21
02_01_0095 - 679597-679671,679775-679890,682241-682319,682446-68... 95 4e-20
04_04_1143 + 31202901-31203034,31203312-31203345,31203913-312039... 95 5e-20
07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520 93 2e-19
08_01_0699 - 6163662-6163680,6163865-6163943,6163979-6164048,616... 84 1e-16
08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751 59 4e-09
12_02_0652 - 21527768-21528328,21528980-21529738,21530151-215302... 33 0.32
05_06_0181 - 26178006-26178836 33 0.32
03_02_0004 - 4869853-4871106 29 5.3
09_04_0285 + 16390786-16391291,16391370-16391957,16392034-163921... 28 9.2
05_07_0206 - 28405109-28406671 28 9.2
04_04_1349 - 32811733-32813040 28 9.2
01_05_0346 + 21191542-21191783,21191988-21192072,21192159-211924... 28 9.2
>03_02_0936 -
12528336-12528379,12528516-12528602,12528696-12528809,
12528895-12529120,12529200-12529523,12529603-12529773,
12529870-12530100,12530291-12530479,12531176-12531178
Length = 462
Score = 237 bits (579), Expect = 9e-63
Identities = 113/205 (55%), Positives = 144/205 (70%), Gaps = 1/205 (0%)
Frame = -1
Query: 756 LKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIGNGFPLAAVV 577
L A E ++ GGL +ADEVQ GF R G HFWGFETHGV PDIVTMAKGIGNG PL AVV
Sbjct: 259 LPLAYEAVRSAGGLCIADEVQAGFARVGSHFWGFETHGVVPDIVTMAKGIGNGIPLGAVV 318
Query: 576 TTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFIRQLMDLQK 397
TT EIA + YFNTFGGNP+ + G AVL V+E+EGLQ N+ VG Y +L LQ
Sbjct: 319 TTPEIAQVLTRRCYFNTFGGNPLCTAGGLAVLRVLEKEGLQANAHAVGSYLKDRLRALQD 378
Query: 396 QHPVIGDVRGQGLMIGVELV-EPGTKTPLTTSKVNDIHENIKDNGVLIARGGRFNNVFRI 220
+H +IGDVRG G M+GVELV + KTP ++ E++K+ GVL+ +GG + NVFRI
Sbjct: 379 KHEIIGDVRGTGFMLGVELVTDRQLKTP-AKDEICRAMEHMKEMGVLVGKGGFYGNVFRI 437
Query: 219 KPPMCITKQDVDFGISIINDAIKKV 145
PP+C TK+D DF +++++ A+ K+
Sbjct: 438 TPPLCFTKEDADFFVAVMDSALSKL 462
>05_05_0202 -
23211342-23211385,23211493-23211579,23211666-23211779,
23211886-23212111,23212222-23212401,23212511-23212654,
23212818-23212979,23213093-23213296,23214109-23214156,
23214601-23214846
Length = 484
Score = 231 bits (564), Expect = 6e-61
Identities = 105/204 (51%), Positives = 145/204 (71%)
Frame = -1
Query: 756 LKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIGNGFPLAAVV 577
L +++K GGL +ADEVQ G RTG HFWGFE+HGV PDIVTMAKGIGNG P+ AVV
Sbjct: 281 LPAVYNMVRKAGGLCIADEVQAGVARTGSHFWGFESHGVIPDIVTMAKGIGNGIPIGAVV 340
Query: 576 TTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFIRQLMDLQK 397
TT EIA + +YFNTFGGNP+++ G AVL+V+E+E LQ+N+ VVG Y +L L++
Sbjct: 341 TTPEIAQVLTRRSYFNTFGGNPVSTAGGHAVLKVLEKEKLQENAFVVGSYLKERLNKLKE 400
Query: 396 QHPVIGDVRGQGLMIGVELVEPGTKTPLTTSKVNDIHENIKDNGVLIARGGRFNNVFRIK 217
+H +IGDVRG+G ++GVELV K ++ + ++KD GVL+ +GG + NVFR+
Sbjct: 401 KHDIIGDVRGKGFLLGVELVTDRQKKTPAKVEIGHVMNHMKDMGVLVGKGGFYGNVFRVT 460
Query: 216 PPMCITKQDVDFGISIINDAIKKV 145
PP+C TK+D DF I ++ ++ K+
Sbjct: 461 PPLCFTKEDSDFFIEAMDISLSKL 484
>03_01_0509 +
3836284-3836547,3836927-3837157,3837253-3837423,
3838379-3838522,3838640-3838819,3838926-3839151,
3839326-3839439,3839541-3839627,3839711-3839754
Length = 486
Score = 223 bits (545), Expect = 1e-58
Identities = 107/202 (52%), Positives = 145/202 (71%), Gaps = 1/202 (0%)
Frame = -1
Query: 756 LKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIGNGFPLAAVV 577
LK A + ++K GG+ +ADEVQ+GFGRTG H+WGF+T V PDIVTMAKGIGNG PL AVV
Sbjct: 283 LKLAYDTVRKAGGVCIADEVQSGFGRTGSHYWGFQTQDVIPDIVTMAKGIGNGLPLGAVV 342
Query: 576 TTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFIRQLMDLQK 397
TT EIA A+ FNTFGGNP+ S G AVL+V+++E Q + VG + + +L +LQ+
Sbjct: 343 TTPEIANVLAQKIQFNTFGGNPVCSVGGLAVLKVLDKEKRQAHCADVGSHLVNRLKELQQ 402
Query: 396 QHPVIGDVRGQGLMIGVELV-EPGTKTPLTTSKVNDIHENIKDNGVLIARGGRFNNVFRI 220
+H +IGDVRG+GLM+GVELV + KTP ++ N + E +KD +L+ +GG NVFRI
Sbjct: 403 KHEIIGDVRGRGLMLGVELVTDRKEKTP-AKAETNLLFEKLKDLNILVGKGGLHGNVFRI 461
Query: 219 KPPMCITKQDVDFGISIINDAI 154
KPPMC T+ D D+ + ++ A+
Sbjct: 462 KPPMCFTRDDADYLVDAMDYAM 483
>05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475
Length = 465
Score = 107 bits (258), Expect = 7e-24
Identities = 62/201 (30%), Positives = 106/201 (52%)
Frame = -1
Query: 756 LKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIGNGFPLAAVV 577
L+ ++ + G L V DEVQ G GRTG + W +E +GV PDI+T+AK + G P+ V+
Sbjct: 269 LQGLRDACDEAGALLVFDEVQCGLGRTG-YLWAYEAYGVLPDIMTLAKPLAGGLPIGVVL 327
Query: 576 TTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFIRQLMDLQK 397
T+++A+ + TFGG P+ L+ I++ G GE F + L
Sbjct: 328 VTEKVASAINFGDHGTTFGGGPLVCQAALTTLDKIQKPGFLAEVAKKGENFKQLLSTKLS 387
Query: 396 QHPVIGDVRGQGLMIGVELVEPGTKTPLTTSKVNDIHENIKDNGVLIARGGRFNNVFRIK 217
+ + ++RG GL++G+EL P PL + + D GV++ G+ NV R+
Sbjct: 388 GNAHVKEIRGIGLIVGIELDVPA--GPLVDACL--------DRGVIVLTAGK-GNVVRLV 436
Query: 216 PPMCITKQDVDFGISIINDAI 154
PP+ I++++++ +I D +
Sbjct: 437 PPLIISEKELEQAAEVIRDCL 457
>03_05_0467 -
24615243-24615384,24619166-24619450,24619516-24619596,
24619807-24619904,24620038-24620190,24620705-24620760,
24620844-24621003,24621416-24621646,24621795-24621903,
24622642-24622799
Length = 490
Score = 98.3 bits (234), Expect = 6e-21
Identities = 67/221 (30%), Positives = 116/221 (52%), Gaps = 19/221 (8%)
Frame = -1
Query: 756 LKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIGNGF-PLAAV 580
LK ++L ++ L +ADE+QTG RTG + ++PD+V + K +G G P++AV
Sbjct: 247 LKAVRDLCSRHNILMIADEIQTGIARTGKML-ACDWENIRPDVVILGKALGAGVVPVSAV 305
Query: 579 VTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEY--------- 427
+ K+I + +TFGGNP+AS V A L+V+ +EGL ++ +V EY
Sbjct: 306 LADKDIMLCIKPGEHGSTFGGNPLASAVAVASLKVVTDEGLVESCMIVYEYLSSKHLLNY 365
Query: 426 --------FIRQLMDLQKQHP-VIGDVRGQGLMIGVELVEPGTKTPLTTSKVNDIHENIK 274
F QL +Q++ P +I +VRG+GL+ V+L + L+ + DI +K
Sbjct: 366 RAAKLGQEFRDQLQKVQQRFPQIIREVRGRGLLNAVDL----SNEALSPASAYDICIKLK 421
Query: 273 DNGVLIARGGRFNNVFRIKPPMCITKQDVDFGISIINDAIK 151
+ GVL + + R+ PP+ I+ +++ +D ++
Sbjct: 422 ERGVLAK--PTHDTIIRLAPPLSISPEELAEASKAFSDVLE 460
>02_01_0095 -
679597-679671,679775-679890,682241-682319,682446-682539,
682638-682716,682846-682933,683023-683106,683351-683398,
684044-684118,684274-684315,684347-684416,684551-684589,
685118-685191,686936-687028,687203-687300,688170-688236
Length = 406
Score = 95.5 bits (227), Expect = 4e-20
Identities = 59/212 (27%), Positives = 110/212 (51%), Gaps = 11/212 (5%)
Frame = -1
Query: 753 KKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIGNGF-PLAAVV 577
+K Q ++KK L++ DEV TGFGR G F G + + +KPD+V++AK + + + P+ A++
Sbjct: 185 EKIQAVVKKYDILFIVDEVITGFGRLGTMF-GSDLYNIKPDLVSLAKALSSAYAPIGAIL 243
Query: 576 TTKEIAA---NHAKA----AYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFIR 418
+ EI+ +H+ A+ T+ G+P++ V L++ E + + V + F
Sbjct: 244 VSPEISDVIHSHSNKLGTFAHGFTYSGHPVSCAVALEALKIYRERDIPGHVTHVAQRFQE 303
Query: 417 QLMDLQKQHPVIGDVRGQGLMIGVELVE---PGTKTPLTTSKVNDIHENIKDNGVLIARG 247
+ P++G+ RG GL+I E + P P + K G+++
Sbjct: 304 GIKAFAAGSPIVGETRGVGLLIATEFTDNKSPYELFPFEWGVGEIFGQECKKRGMMVKVL 363
Query: 246 GRFNNVFRIKPPMCITKQDVDFGISIINDAIK 151
G N+ + PP+ IT++++D +SI +A+K
Sbjct: 364 G---NLIAMSPPLIITREEIDKLVSIYGEALK 392
>04_04_1143 + 31202901-31203034,31203312-31203345,31203913-31203985,
31204090-31204187,31204356-31204448,31205081-31205154,
31205680-31205768,31205859-31205935,31206016-31206090,
31206438-31206485,31206571-31206654,31206734-31206821,
31206896-31206974,31207072-31207162,31207724-31207802,
31208219-31208334,31208430-31208488,31210292-31210342,
31211418-31211444,31211725-31211809,31211952-31212024,
31212154-31212251,31212385-31212477,31212972-31213045,
31213258-31213296,31213410-31213498,31213583-31213707,
31213750-31213824,31214225-31214272,31214359-31214442,
31214574-31214661,31214762-31214840,31214930-31215020,
31215113-31215191,31215485-31215600,31215910-31215987
Length = 960
Score = 95.1 bits (226), Expect = 5e-20
Identities = 61/212 (28%), Positives = 114/212 (53%), Gaps = 11/212 (5%)
Frame = -1
Query: 753 KKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIGNGF-PLAAVV 577
+K Q ++KK L++ADEV T FGR G F G + + +KPD+V+MAK + + + P+ A++
Sbjct: 739 EKVQAIVKKYDILFIADEVITAFGRLGTMF-GSDMYNIKPDLVSMAKALSSAYVPIGAIM 797
Query: 576 TTKEIA-ANHAKA------AYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFIR 418
+ EI+ H+++ A+ T+ G+P+A V L++ +E + + K + F +
Sbjct: 798 VSPEISDVIHSQSNKLGSFAHGFTYSGHPVACAVAIEALKIYQERNIPDHVKQISPRF-Q 856
Query: 417 QLMDLQKQHPVIGDVRGQGLMIGVELVE---PGTKTPLTTSKVNDIHENIKDNGVLIARG 247
+ + P++G++RG GL++G E + P P + G+L+
Sbjct: 857 EGVKAFAGSPIVGEIRGVGLILGTEFADNKSPNDPFPAEWGVGAIFGAECQKRGMLVRVA 916
Query: 246 GRFNNVFRIKPPMCITKQDVDFGISIINDAIK 151
G +N+ + PP+ +T +V+ +SI DA+K
Sbjct: 917 G--DNIM-MSPPLIMTPDEVEELVSIYGDALK 945
Score = 85.8 bits (203), Expect = 3e-17
Identities = 57/212 (26%), Positives = 108/212 (50%), Gaps = 11/212 (5%)
Frame = -1
Query: 753 KKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIGNGF-PLAAVV 577
+K Q +++K L++ADEV TGFGR G F G + + +KPD+V++AK + + + P+ A +
Sbjct: 248 EKIQAVLQKYDVLFIADEVITGFGRLGTMF-GSDLYNIKPDLVSLAKALSSAYVPIGATL 306
Query: 576 TTKEIA----ANHAKAAYFN---TFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFIR 418
+ EI+ + K +F T+ G+P++ V L++ E + + K + F +
Sbjct: 307 VSPEISDVVHSQSNKIGFFAHGFTYSGHPVSCAVALEALKIYRERNIPAHVKQISPRF-Q 365
Query: 417 QLMDLQKQHPVIGDVRGQGLMIGVELV---EPGTKTPLTTSKVNDIHENIKDNGVLIARG 247
+ + +IG+ RG GL++ E P P+ K G+L+
Sbjct: 366 EGIKAFAGSSIIGETRGVGLLLATEFANNKSPNDPFPVEWGVAQIFGAECKKRGMLVKVV 425
Query: 246 GRFNNVFRIKPPMCITKQDVDFGISIINDAIK 151
G + + PP+ +++++VD +SI +A+K
Sbjct: 426 G---DEIAMSPPLIMSQREVDGLVSIYGEALK 454
>07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520
Length = 448
Score = 93.5 bits (222), Expect = 2e-19
Identities = 48/142 (33%), Positives = 77/142 (54%)
Frame = -1
Query: 756 LKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIGNGFPLAAVV 577
L+ ++ + G L V DEVQ G GRTG + W +E +GV PDI+T+AK + G P+ V+
Sbjct: 280 LQGLRDACDEAGALLVFDEVQCGLGRTG-YLWAYEAYGVVPDIMTLAKPLAGGLPIGVVL 338
Query: 576 TTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFIRQLMDLQK 397
T+++A+ + TFGG P+ L+ I++ G GE F + L
Sbjct: 339 VTEKVASAINYGDHGTTFGGGPLVCQAALTTLDKIQKPGFLAEVAKKGENFKQLLSTKLS 398
Query: 396 QHPVIGDVRGQGLMIGVELVEP 331
+ + ++RG GL++G+EL P
Sbjct: 399 GNAHVKEIRGIGLIVGIELDVP 420
>08_01_0699 -
6163662-6163680,6163865-6163943,6163979-6164048,
6164151-6164266,6164656-6164734,6164831-6164921,
6165006-6165084,6165161-6165248,6165371-6165454,
6165544-6165591,6166118-6166192,6166286-6166362,
6166460-6166548,6166711-6166749,6167133-6167206,
6167496-6167588,6167820-6167917,6168100-6168172,
6168322-6168406,6168513-6168634,6169307-6169414,
6169537-6169608
Length = 585
Score = 84.2 bits (199), Expect = 1e-16
Identities = 59/212 (27%), Positives = 111/212 (52%), Gaps = 11/212 (5%)
Frame = -1
Query: 753 KKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIGNGF-PLAAVV 577
+K Q ++KK L +ADEV T FGR G F G + + +KPD+V++AK + + + P+ A++
Sbjct: 334 EKIQAVLKKYDILLIADEVITAFGRLGTMF-GCDMYDIKPDLVSIAKALSSAYMPIGAIL 392
Query: 576 TTKEIA------ANH-AKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFIR 418
+ EI +N A+ T+ G+P++ V L++ +E + ++ + + F +
Sbjct: 393 VSPEITDVIYSQSNKLGSFAHGFTYSGHPVSCAVAIEALKIYKERNIIEHVQKIAPRF-Q 451
Query: 417 QLMDLQKQHPVIGDVRGQGLMIGVELVE---PGTKTPLTTSKVNDIHENIKDNGVLIARG 247
+ + P++G++RG GL++G E V+ P P + + G+LI
Sbjct: 452 EGIKAFSGSPIVGEIRGLGLILGTEFVDNKSPNDPFPAEWGVGSLFGAECEKRGMLIRVA 511
Query: 246 GRFNNVFRIKPPMCITKQDVDFGISIINDAIK 151
G +N+ + PP+ +T +V+ I DA+K
Sbjct: 512 G--DNIM-LSPPLIMTPDEVEEIICKYGDALK 540
>08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751
Length = 478
Score = 58.8 bits (136), Expect = 4e-09
Identities = 53/177 (29%), Positives = 79/177 (44%), Gaps = 9/177 (5%)
Frame = -1
Query: 756 LKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIGNGFPLAAVV 577
L ++L K++G L V DEV TGF + E G+ PD+ T+ K IG G P+ A
Sbjct: 273 LNALRDLTKQDGALLVFDEVMTGFRLA--YGGAQEYFGITPDVSTLGKIIGGGLPVGAYG 330
Query: 576 TTKEIAANHAKAA---YFNTFGGNPMASTVGKAVLEVIEEEGLQQN-SKVVGEYFIRQLM 409
K+I A A T GNP+A T G L+ + E G K+ G+ +R ++
Sbjct: 331 GRKDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLMEPGTYDYLDKITGD-LVRGVL 389
Query: 408 D--LQKQHPVI-GDVRGQ-GLMIGVELVEP-GTKTPLTTSKVNDIHENIKDNGVLIA 253
D + H + G +RG G V G T+K + + + GV +A
Sbjct: 390 DAGAKTGHEMCGGHIRGMFGFFFTAGPVHNFGDAKKSDTAKFGRFYRGMLEEGVYLA 446
>12_02_0652 -
21527768-21528328,21528980-21529738,21530151-21530216,
21530550-21530598,21530717-21530817,21531469-21531540,
21531630-21531746,21531870-21531959,21532224-21532319,
21532429-21532482,21533210-21533290,21533382-21533581,
21533677-21533804,21533943-21533995,21534312-21534374
Length = 829
Score = 32.7 bits (71), Expect = 0.32
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = -1
Query: 492 KAVLEVIEEEGLQQNSKVVGEYFIRQLMDLQKQHPVIGDVRGQGLMIGVELVEPG 328
K +I E Q+N +V GEY R ++KQ + D+ G+ M+ ELV G
Sbjct: 606 KTATAIIPAELEQKNGEVDGEYIKRLKSFVEKQCNEMQDLLGRNAMLAEELVRTG 660
>05_06_0181 - 26178006-26178836
Length = 276
Score = 32.7 bits (71), Expect = 0.32
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 613 LSHRHDVGLHAVRLEAPEMISSATEACLYLISYIQATILLDQ 738
L HRHD G+ AVR +AP+++ + + I T+ L Q
Sbjct: 87 LRHRHDNGITAVRKQAPQLLRQGRKLKTMELGGITGTVFLGQ 128
>03_02_0004 - 4869853-4871106
Length = 417
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +2
Query: 179 PKSTSCLVMHIGGFILNTLLKRPPRAMSTPLSLIFSWISLTLEVVS-GVLVPGSTSSTPI 355
P S L H IL T + P A +T W +L +S G L+P +
Sbjct: 198 PTDASDLASHATVDILTTATEASPTASAT-----LQWTHGSLNALSWGFLLPVGAAVARY 252
Query: 356 MRPCPLTSP 382
+RPC T P
Sbjct: 253 LRPCASTGP 261
>09_04_0285 +
16390786-16391291,16391370-16391957,16392034-16392160,
16392291-16392477,16392585-16392741,16392847-16393201
Length = 639
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -1
Query: 483 LEVIEEEG--LQQNSKVVGEYFIRQLMDLQKQHPVIGDVRGQGLMIGVELVEPGTK 322
++ ++EE +Q+ K VG+ ++ DLQ IG V G+ L ++L++ +K
Sbjct: 290 MDKLKEEAVDIQREIKTVGDSMSTKMQDLQSTANDIGSVAGKSLENQMQLLDGQSK 345
>05_07_0206 - 28405109-28406671
Length = 520
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 295 INFGSGQRCLSSGFNKLHSDHEALSPDIANHWVLLLKIHQLP 420
I FGSG +C S+ + L S + A + N W+ +IH+ P
Sbjct: 472 IAFGSGFKCNSAVWRALRSVNPAKENNFTNPWI--DEIHRFP 511
>04_04_1349 - 32811733-32813040
Length = 435
Score = 27.9 bits (59), Expect = 9.2
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +1
Query: 361 ALSPDIANHWVLLL--KIHQLPDEVFADYLTVLLQSFFFNNLQYSFSNSRSHRVSTESVK 534
A SP + + W L L + H LPD + D + +FF L +S + S S+ S+
Sbjct: 98 APSPPLPSSWFLRLLSESHSLPDSAWRDAFRMSRPAFF--QLLHSLALSDPAAASSSSLA 155
Query: 535 VGSLRVIGCYLF 570
+ +G LF
Sbjct: 156 LPPDHKLGAALF 167
>01_05_0346 +
21191542-21191783,21191988-21192072,21192159-21192422,
21192518-21192820,21193695-21193799,21193916-21194020,
21194613-21194712,21195614-21195933,21196183-21196359,
21196432-21196560,21196592-21196636,21196851-21197078
Length = 700
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +2
Query: 302 LEVVSGVLVPGSTSSTPIMRPCPLTSPITGCCF*RSINC 418
+E + + +P S +P P P + CC R+I+C
Sbjct: 1 MEAAASLPLPASRFLSPPPHPTPAAAAAAACCSRRNISC 39
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,979,451
Number of Sequences: 37544
Number of extensions: 441201
Number of successful extensions: 1396
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1379
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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